Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03451 and RBAM_021330
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence dna-align/BSNT_03451___dacB.1.9828.seq
# -bsequence dna-align/RBAM_021330___dacB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03451___dacB-RBAM_021330___dacB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03451___dacB-RBAM_021330___dacB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03451___dacB
# 2: RBAM_021330___dacB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1184
# Identity: 870/1184 (73.5%)
# Similarity: 870/1184 (73.5%)
# Gaps: 67/1184 ( 5.7%)
# Score: 3119.5
#
#
#=======================================
BSNT_03451___ 1 ATGCGCATTTTCAAAAAA---GCAGTATTCGTGATCATGATTT---CTTT 44
||||||.||.|||||||| ||.||||| || ||| ||||
RBAM_021330__ 1 ATGCGCTTTCTCAAAAAAGCTGCCGTATT-----TC----TTTTGACTTT 41
BSNT_03451___ 45 TCTTA-------TTGCA--ACCGTAAATGTGAATACAGCACATGCTGCTA 85
|.||| ||.|| || |.|.|..|||||.||||||||....|
RBAM_021330__ 42 TGTTATTCTTTTTTCCATTAC---AGACGGCAATACGGCACATGCCCAAA 88
BSNT_03451___ 86 TAGATGTCAGTGCAAAAAGCGCGATCATTATTGACGGTGCGTCAGGCAGA 135
||.|||||||.||||||||||||||.||.||.|||||.||.||.|||||.
RBAM_021330__ 89 TACATGTCAGCGCAAAAAGCGCGATTATAATCGACGGAGCATCTGGCAGG 138
BSNT_03451___ 136 GTGTTATATGCCAAGGATGAGCATCAAAAAAGGCGGATCGCGAGCATCAC 185
|||||||..|||||||||||.|||||.||..|||||||.||.|||||.||
RBAM_021330__ 139 GTGTTATTCGCCAAGGATGAACATCATAAGCGGCGGATTGCAAGCATTAC 188
BSNT_03451___ 186 AAAAATTATGACCGCCGTCCTCGCCATCGAATCCGGCAAAATGGATCAAA 235
.|||||.|||||.||.||.||.||.||.|||||.||.||.|||||..|.|
RBAM_021330__ 189 GAAAATCATGACGGCGGTGCTGGCGATTGAATCAGGGAAGATGGAAGAGA 238
BSNT_03451___ 236 CGGTGACGGTTTCGGCAAATGCTGTCAGAACAGAAGGCTCCGCCATTTA- 284
|.|||||||||||..|.|||||.||.|.|||.||||||||.||||||||
RBAM_021330__ 239 CCGTGACGGTTTCCCCGAATGCCGTAAAAACGGAAGGCTCAGCCATTTAT 288
BSNT_03451___ 285 -TTTAACAGAAGGTCAAAAAGTGAAGCTAAAAGATCTTGTGTATGGCCTG 333
||.|.|.| ||.||||||||.|||||.||||||||.||.||.||.||.
RBAM_021330__ 289 CTTCAGCCG--GGACAAAAAGTAAAGCTGAAAGATCTCGTATACGGGCTT 336
BSNT_03451___ 334 ATGCTAAGATCAGGAAACGACGCCGCTGTCGCGATTGCTGAGCATGTCGG 383
|||.||||.||||||||.||||||||||..||.||.||.||..|||||||
RBAM_021330__ 337 ATGTTAAGGTCAGGAAATGACGCCGCTGCGGCAATAGCGGAATATGTCGG 386
BSNT_03451___ 384 TGGGAGCCTCGATGGGTTTGTTTATATGATGAATCAAAAAGCCGAGCAGC 433
.||.|||||.||.||.|||||.|.|||||||||..|||||||||||||..
RBAM_021330__ 387 CGGAAGCCTTGACGGTTTTGTATTTATGATGAACAAAAAAGCCGAGCAAA 436
BSNT_03451___ 434 TTGGTATGAAAAACACCCGTTTTCAAAACCCGCACGGATTGGACGACCAT 483
|.||.|||.||||.||....||||||||.||||||||..|||||||||||
RBAM_021330__ 437 TCGGGATGGAAAATACAAAATTTCAAAATCCGCACGGGCTGGACGACCAT 486
BSNT_03451___ 484 GAAAATCATTATTCAACAGCCTATGACATGGCCATTTTAACTAAGTATGC 533
||||||...||||||||.||.|||||.|||||..||||.|||||.||.||
RBAM_021330__ 487 GAAAATTTATATTCAACGGCGTATGATATGGCGCTTTTGACTAAATACGC 536
BSNT_03451___ 534 TATGAAGCTGAAAGACTATCAAAAGATTTCAGGCACAAAAATATACAAAG 583
.|||||..|.||.||.||.|..|...||||||||||||||.|.||.||.|
RBAM_021330__ 537 GATGAAAATCAAGGAATACCGGACCGTTTCAGGCACAAAAGTGTATAAGG 586
BSNT_03451___ 584 CGGAAACGATGGAAAGCGTATGGAAAAACAAAAATAAACTGCTGACCATG 633
|||||||||||||..|.|||||||||||.|||||.||.||.||||||..|
RBAM_021330__ 587 CGGAAACGATGGACCGGGTATGGAAAAATAAAAACAAGCTTCTGACCGGG 636
BSNT_03451___ 634 CTATATCCG-TACAGCACAGGAGGAAAAACAGGCTATACAAAACTTGCAA 682
||.|| ||| |||||||||||.|||||||||||.||.||||||.|.||.|
RBAM_021330__ 637 CTCTA-CCGTTACAGCACAGGCGGAAAAACAGGTTACACAAAAATCGCGA 685
BSNT_03451___ 683 AACGGACACTGGTCTCTACGGCTTCAAAGGACGGCATTGACCTGATAGCC 732
|||||||.||.|||||.|||||.|||||.|||||.|..||.||.||.||.
RBAM_021330__ 686 AACGGACGCTCGTCTCGACGGCCTCAAAAGACGGAACGGATCTCATCGCG 735
BSNT_03451___ 733 GTCACCATTAATGACCCTAATGATTGGGATGACCATATGAAGATGTTTAA 782
|||||.||.|||||.||..|||||||||||||.||||||||.||||||||
RBAM_021330__ 736 GTCACTATAAATGATCCGGATGATTGGGATGATCATATGAATATGTTTAA 785
BSNT_03451___ 783 CTATGTGTTTGAGCATTATCAAACCTATTTAATTGCAAAAAAAGGGGATA 832
.|||||.||||||||.|||.||||||||.|..|.||.||||||||.|..|
RBAM_021330__ 786 TTATGTCTTTGAGCACTATAAAACCTATGTCGTCGCTAAAAAAGGCGGCA 835
BSNT_03451___ 833 TTCCAAAGCTGAAAGGCACATTTTATGAATCGAAG---GCTTTTATCAAA 879
|.||.|||||||||...||.|||||.|.| ||| ||||||||....
RBAM_021330__ 836 TCCCGAAGCTGAAAAAGACGTTTTACGGA---AAGCGTGCTTTTATTGCC 882
BSNT_03451___ 880 CGTGATATCACCTATTTGCTGACTGAAGAGGAAAAAGAAGATGTGAAAAT 929
||.|||.|||..||||||.|.|..||.||.||||.|||.|||||||||||
RBAM_021330__ 883 CGGGATGTCAAATATTTGTTAAAAGAGGATGAAATAGACGATGTGAAAAT 932
BSNT_03451___ 930 TAATACCACAC-----TGCTCAAGCCGAAAAAAGCATGGGAAAAAGATGC 974
||.||| |..|.||.|||||||||||.|||.||||.||.||
RBAM_021330__ 933 -----CCGCACAACCTTAATAAAACCGAAAAAAGCCTGGAAAAAGGACGC 977
BSNT_03451___ 975 CTCGAAAATCCCTGACATCGTAGGGCACATG---GAGAT-CATGTT--CA 1018
|||....||.|||||..||||.||.|..||| |..|| ||||.| .|
RBAM_021330__ 978 CTCTCTCATTCCTGATGTCGTCGGCCGGATGACTGTTATGCATGATGGGA 1027
BSNT_03451___ 1019 ACGATGCAACCATCGCAAAAGTGCCGATCTATTATGAAAATGAGCGGCAT 1068
|.| || |||||.||..|.||..|||||||||||||||||||.|||
RBAM_021330__ 1028 AAG-TG-----ATCGCCAAGATCCCCGTCTATTATGAAAATGAGCGCCAT 1071
BSNT_03451___ 1069 CAAAAACCGAAGAAACAATTTTTTGAAACGTTTAAATCAA---TCTTTCT 1115
.||||||||||.||.||.||..||||.||||||| |.| |.|||.|
RBAM_021330__ 1072 AAAAAACCGAAAAAGCATTTCATTGAGACGTTTA---CGAGCCTGTTTAT 1118
BSNT_03451___ 1116 GAATGCGGCAGGCGGAGCAAAATGGTCAATATAA 1149
||..|||||.|||||..|...|||||||||.|||
RBAM_021330__ 1119 GAGCGCGGCGGGCGGTTCGTCATGGTCAATTTAA 1152
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