Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03449 and RBAM_021310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence dna-align/BSNT_03449___spmB.1.9828.seq
# -bsequence dna-align/RBAM_021310___spmB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03449___spmB-RBAM_021310___spmB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03449___spmB-RBAM_021310___spmB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03449___spmB
# 2: RBAM_021310___spmB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 540
# Identity: 438/540 (81.1%)
# Similarity: 438/540 (81.1%)
# Gaps: 6/540 ( 1.1%)
# Score: 1784.0
#
#
#=======================================
BSNT_03449___ 1 ATGGAAATCATCAACTGGCTGTCTTTAGCCATGATTCCAATCATTATTGC 50
||||||||..|.||.|||||||||||||||||||||||.||.|||||.||
RBAM_021310__ 1 ATGGAAATGGTGAATTGGCTGTCTTTAGCCATGATTCCGATTATTATCGC 50
BSNT_03449___ 51 CGGAATTCTTCTTTATGGAACGATCAAAAAGGTTCCGACATATGAATCGT 100
|||.||..|..|.||.||.|||||||||||.||.|||||.||||||||.|
RBAM_021310__ 51 CGGTATATTGATATACGGCACGATCAAAAAAGTGCCGACGTATGAATCAT 100
BSNT_03449___ 101 TTGTCGAAGGTGGGAAAGAGGGGATAGAAATTGCCTTTTCCATTATCCCC 150
|.||.|||||.||.|||||.||.||.||.|||||.||||||||.||.||.
RBAM_021310__ 101 TCGTTGAAGGCGGAAAAGAAGGAATTGAGATTGCGTTTTCCATCATTCCG 150
BSNT_03449___ 151 TATTTAGTCGGAATGCTTGTCGCTATAACTGTTTTCAGATCATCAGGCGC 200
|||||.|||||.|||||.||.||.||.||.||.|||.|..|.||.|||||
RBAM_021310__ 151 TATTTGGTCGGGATGCTGGTGGCGATTACCGTATTCCGGGCCTCGGGCGC 200
BSNT_03449___ 201 GCTTGATTTTATAATGGATCTTTTAAAACCGGCTTTCT---CCGCTATCG 247
|||.||||||.|.||||..||.|..|| |.|||||| |.||..|||
RBAM_021310__ 201 GCTGGATTTTGTCATGGGGCTGTGCAA---GCCTTTCTTTACAGCGCTCG 247
BSNT_03449___ 248 GCATTCCTGCTGAAGTAGTGCCGCTTGCTCTGATCCGCCCGATCTCCGGT 297
|||||||.||.|||||.||||||||||||||||||||||||||.||.||.
RBAM_021310__ 248 GCATTCCCGCAGAAGTCGTGCCGCTTGCTCTGATCCGCCCGATTTCGGGG 297
BSNT_03449___ 298 ACGGCCGCTCTCGGAATGACGACCGATTTAATTGCAGTATACGGGCCCGA 347
|||||.||.|||||.||||||||.|||.|.||.||.||.||||||||.||
RBAM_021310__ 298 ACGGCGGCGCTCGGCATGACGACAGATCTGATCGCCGTGTACGGGCCTGA 347
BSNT_03449___ 348 TTCCTTTATCGGCAGGCTGGCTTCCGTCATGCAGGGATCTACAGATACAA 397
|||.||||||||||||||||||||.||||||||||||||.||.||.||.|
RBAM_021310__ 348 TTCATTTATCGGCAGGCTGGCTTCGGTCATGCAGGGATCGACTGACACGA 397
BSNT_03449___ 398 CGCTTTACGTACTGACTGTGTATTTCGGAGCAGTCGGCATTAAAAAAATG 447
||||.||.||.|||||.|||||||||||.||.||||||||.|||||||||
RBAM_021310__ 398 CGCTGTATGTCCTGACGGTGTATTTCGGGGCGGTCGGCATCAAAAAAATG 447
BSNT_03449___ 448 GGTGATGCATTAAAGGTGGGACTTCTTGCAGATTTAATCGGCGTAGTTGC 497
||.|||||.||||||||.||.||||||||.|||||.|||||.||.|||||
RBAM_021310__ 448 GGGGATGCTTTAAAGGTTGGTCTTCTTGCTGATTTGATCGGGGTGGTTGC 497
BSNT_03449___ 498 ATCTATCATCATCGTTACGTTATTATTTGGGAGCGCCTGA 537
|||.||||||||.|||||||||||||||||.|||||||||
RBAM_021310__ 498 ATCAATCATCATAGTTACGTTATTATTTGGAAGCGCCTGA 537
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