Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03446 and RBAM_021290

See Amino acid alignment / Visit BSNT_03446 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:41
# Commandline: needle
#    -asequence dna-align/BSNT_03446___resA.1.9828.seq
#    -bsequence dna-align/RBAM_021290___resA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03446___resA-RBAM_021290___resA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03446___resA-RBAM_021290___resA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03446___resA
# 2: RBAM_021290___resA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 548
# Identity:     430/548 (78.5%)
# Similarity:   430/548 (78.5%)
# Gaps:          16/548 ( 2.9%)
# Score: 1677.0
# 
#
#=======================================

BSNT_03446___      1 ATGAAGAAAAAA---AGGCGTTTATTCATTCGGACCGGCATCCTTCTCGT     47
                     |||||.||||||   .||||||||||||||||||||||||||||||||.|
RBAM_021290__      1 ATGAACAAAAAACGGCGGCGTTTATTCATTCGGACCGGCATCCTTCTCAT     50

BSNT_03446___     48 TTTAATCTGCGCACTCGGCTATACCATTTACAACGCTGTATTTGCCGGCA     97
                     .|||.|||||||.|||||.||||||||.||.||.||.||||.|    .||
RBAM_021290__     51 CTTACTCTGCGCGCTCGGATATACCATCTATAATGCCGTATAT----ACA     96

BSNT_03446___     98 AA----GAGAGTATATCCGAAGGGTCCGACGCACCGAATTTTGTCCTTGA    143
                     ||    |||.|||||||.||.||||||.|.||.||||||||.|..||..|
RBAM_021290__     97 AACGGTGAGCGTATATCTGAGGGGTCCAAAGCCCCGAATTTCGCGCTGAA    146

BSNT_03446___    144 GGATACGAATGGGAAACGTATCGAGCTCAGTGACTTAAAAGGGAAAGGTG    193
                     .|||||..|.||.|.||..||.||.||.|||.|.||||||||.|||||||
RBAM_021290__    147 AGATACAGAGGGCAGACTCATAGAACTGAGTCAGTTAAAAGGAAAAGGTG    196

BSNT_03446___    194 TTTTTTTGAATTTCTGGGGTACATGGTGTGAACCGTGCAAAAAAGAGTTT    243
                     |||||.|||||||||||||.||.||||||||.||||||||..|.||.|||
RBAM_021290__    197 TTTTTCTGAATTTCTGGGGAACGTGGTGTGAGCCGTGCAAGCAGGAATTT    246

BSNT_03446___    244 CCTTATATGGCAAACCAATATAAGCATTTTAAAAGCCAAGGTGTTGAAAT    293
                     ||.|||||||..||.|||||.||||||||||||..||..|||||.||..|
RBAM_021290__    247 CCCTATATGGAGAATCAATACAAGCATTTTAAAGACCTCGGTGTCGAGGT    296

BSNT_03446___    294 TGTCGCTGTAAATGTTGGGGAGTCAAAGATAGCAGTACATAATTTTATGA    343
                     .||.||.||||||||.||.||.|||||.||.|||||||||||||||||||
RBAM_021290__    297 GGTTGCGGTAAATGTCGGCGAATCAAAAATTGCAGTACATAATTTTATGA    346

BSNT_03446___    344 AATCCTACGGAGTCAATTTCCCGGTTGTTCTGGATACAGATCGCCAAGTG    393
                     ||.|.|||||.||||||||||||||||..||.|||||.||.||.||||||
RBAM_021290__    347 AAACATACGGCGTCAATTTCCCGGTTGCGCTCGATACTGACCGGCAAGTG    396

BSNT_03446___    394 CTTGATGCCTATGACGTATCTCCGCTTCCGACAACCTTTTTGATCAATCC    443
                     ||.||.||.||.|.||||||.||..|||||||.||.||||||||||||||
RBAM_021290__    397 CTGGACGCGTACGGCGTATCACCTATTCCGACGACATTTTTGATCAATCC    446

BSNT_03446___    444 GGAAGGAAAAGTTGTCAAGGTGGTGACCGGCACTATGACAGAAAGCATGA    493
                     .||.||||||||.||.||.||||||||||||||.|||||||||.|||||.
RBAM_021290__    447 CGACGGAAAAGTCGTGAAAGTGGTGACCGGCACGATGACAGAACGCATGG    496

BSNT_03446___    494 TACACGAATATATGAATCTCATAAAACCCGGA-GAGACTTCGGGATGA    540
                     |.||.||.|||||||||.|.|| .||.||||| |.|.||||   ||||
RBAM_021290__    497 TTCATGACTATATGAATTTAAT-TAAGCCGGAGGCGTCTTC---ATGA    540


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03446 and RBAM_021290

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
