Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03441 and RBAM_021270

See Amino acid alignment / Visit BSNT_03441 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:40
# Commandline: needle
#    -asequence dna-align/BSNT_03441___resC.1.9828.seq
#    -bsequence dna-align/RBAM_021270___resC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03441___resC-RBAM_021270___resC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03441___resC-RBAM_021270___resC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03441___resC
# 2: RBAM_021270___resC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1181
# Identity:     750/1181 (63.5%)
# Similarity:   750/1181 (63.5%)
# Gaps:         229/1181 (19.4%)
# Score: 2889.5
# 
#
#=======================================

BSNT_03441___      1 ATGGCAGAGCTGAGCGGAAATTTTCTTTATGCGGCCTTTCTTGTGTATTT     50
                                                                       
RBAM_021270__      0 --------------------------------------------------      0

BSNT_03441___     51 AATCGCTGTCCCGATCTTCGGCGGGGCCATACGCGGGAATAAAGATAAAA    100
                                                                       
RBAM_021270__      0 --------------------------------------------------      0

BSNT_03441___    101 AGGGCAGGCCAAACCGATGGGCCAACATTGGAATCACTCTTTCTATTGTC    150
                                                                       
RBAM_021270__      0 --------------------------------------------------      0

BSNT_03441___    151 GGTTTTTTCTGCCACCTTGGATATTTCATCACAAGGTGGGCTGCCAGCGG    200
                                                                       
RBAM_021270__      0 --------------------------------------------------      0

BSNT_03441___    201 CCATGCGCCGGTCAGCAATATGTTTGAATTCACCACCGCTTTTGGCATGA    250
                                        |||||||||||.||.||..|.||.|||||||
RBAM_021270__      1 -------------------ATGTTTGAATTTACGACGTCATTCGGCATGA     31

BSNT_03441___    251 TGCTTGTTTTGGCGTTTATCATTCTTTATTTTCTCTATAGATTGCCTTCA    300
                     ||||||||.|.||.|||||.|||.||||.|||.|.||.|||.||||||||
RBAM_021270__     32 TGCTTGTTCTAGCTTTTATTATTATTTACTTTATTTACAGACTGCCTTCA     81

BSNT_03441___    301 TTAGGCCTGTTTACGCTGTCAATTGCTTTATTGCTGATTGCCTACGCCAG    350
                     ||||||.||||.||..||||.||.||..|.|||||.||.||.||.||.||
RBAM_021270__     82 TTAGGCATGTTCACATTGTCTATCGCGCTTTTGCTTATCGCATATGCAAG    131

BSNT_03441___    351 CATGTTTCCGACAGATATCTCGCCTTTAATTCCTTCGCTCCAAAGCAACT    400
                     |||||||||||||||.||..||||..|.|||||.||.||.||.|||||.|
RBAM_021270__    132 CATGTTTCCGACAGACATTACGCCGCTTATTCCGTCACTGCAGAGCAATT    181

BSNT_03441___    401 GGCTGTATATTCATGTAACAACGGCCGCGCTTGGGCAAGCTATACTTGCC    450
                     |||||||.|||||.||.||.|||||.|||||.|||||.||.||.|||||.
RBAM_021270__    182 GGCTGTACATTCACGTCACGACGGCGGCGCTCGGGCAGGCGATTCTTGCG    231

BSNT_03441___    451 ATCAGCTTTGTCGCTGGTGTCATCTTTCTTTTGAAGCATGTAGACCAGAC    500
                     |||||.|||||.||.||.|||||.||.||.||.|||||.||.|||||..|
RBAM_021270__    232 ATCAGTTTTGTAGCCGGCGTCATTTTCCTGTTAAAGCACGTCGACCAATC    281

BSNT_03441___    501 AAAGCCAAGCAAAAAGACCTTCTGGCTTGAAGCGATTATGTTTATCCTGG    550
                     .|..||..|.|||||.||.||||||||.||||..||.||||||||.||.|
RBAM_021270__    282 TAGACCGGGTAAAAAAACGTTCTGGCTCGAAGTCATCATGTTTATACTCG    331

BSNT_03441___    551 TCACAACCGTCGCCTTTATTGCAATCACATCAGCATTTCGTCTTGCAGGC    600
                     |.||.|||||.||.|||||.||..||||.||.|||||.||..|.||.|.|
RBAM_021270__    332 TGACGACCGTGGCATTTATCGCCGTCACGTCGGCATTCCGGATGGCGGAC    381

BSNT_03441___    601 TATGAAGCGGAGTTTAACTGGGTGGACAAAAGTAAAGAA---AAAGGCGT    647
                     ||..||||.||.|||||.||||||||.|||   ||||||   |||.||||
RBAM_021270__    382 TACAAAGCTGAATTTAATTGGGTGGATAAA---AAAGAAGCCAAAAGCGT    428

BSNT_03441___    648 GATGGTGTACGAAATGCCCGCGCTTGTCGGTCCGCATCAGGGAGAGCTTT    697
                     .|||.|.||.||.|||||.|||||||||||.||||||.|||||||.||..
RBAM_021270__    429 CATGATATATGATATGCCTGCGCTTGTCGGCCCGCATGAGGGAGAACTGC    478

BSNT_03441___    698 TGACCGAAGGAAGAATGAAACCGCTTGTTGATCTTCCCGCGCTTTTCTCA    747
                     |.||.|||||...||||||.||||||.||||.|||||.||..||||.|||
RBAM_021270__    479 TTACGGAAGGCGCAATGAAGCCGCTTATTGAGCTTCCGGCCATTTTTTCA    528

BSNT_03441___    748 GGCAGAAAAGTGAACACTGTCATTTGGTCATTTGGAGCAGGTCTTGTGTT    797
                     ||||||||.||.||.||.||.||.|||||.|||||.|||||.||.||.||
RBAM_021270__    529 GGCAGAAAGGTCAATACGGTGATCTGGTCGTTTGGCGCAGGCCTCGTTTT    578

BSNT_03441___    798 GTATGGGGCTCTCCGTCTGATCATCAGAAAAAGAATCAGCGCTCTATTA-    846
                     .||.||.||.|||.|.|||||..|||||||.|||||||||||||  ||| 
RBAM_021270__    579 ATACGGTGCGCTCAGGCTGATATTCAGAAAGAGAATCAGCGCTC--TTAT    626

BSNT_03441___    847 CA-TCCGCTGGTGAAAAACGTCAATCTTGATCTGGTGGATGAGGTTGGGT    895
                     || .|||||.||.|||||.||.|||||.||..||||.|||||.||.||.|
RBAM_021270__    627 CAGCCCGCTCGTCAAAAATGTGAATCTGGACTTGGTCGATGAAGTCGGCT    676

BSNT_03441___    896 ACAGGGCCGTATCAATCGGATTTCCGATCTTTACACTCGGCGCGCTGATC    945
                     ||.|.||.||.||.|||||.||||||.|.||.||||||||||||||..|.
RBAM_021270__    677 ACCGCGCTGTTTCCATCGGTTTTCCGGTATTCACACTCGGCGCGCTTGTG    726

BSNT_03441___    946 TTTGCAATGATTTGGGCTCAGCTTGCGTGGACCAGGTTTTGGGGCTGGGA    995
                     |||||.|||||||||||.||||||||.|||||..|.||||||||||||||
RBAM_021270__    727 TTTGCGATGATTTGGGCGCAGCTTGCATGGACGCGTTTTTGGGGCTGGGA    776

BSNT_03441___    996 CCCTAAGGAAGTATGGGCGCTGATCACATTTTTGTTCTATGCCGCTTACT   1045
                     |||.||||||||||||||||||||.||.|||||.||.||.||.||.||.|
RBAM_021270__    777 CCCGAAGGAAGTATGGGCGCTGATTACCTTTTTATTTTACGCAGCGTATT    826

BSNT_03441___   1046 TGCATTTAAGACTGTCAAGAGGCTGGCACGGTGAGAAGTCAGCATGGCTG   1095
                     ||||.||..|.|||||||||||||||||.||.||.|||||.||.|||||.
RBAM_021270__    827 TGCACTTGCGGCTGTCAAGAGGCTGGCATGGCGAAAAGTCCGCGTGGCTT    876

BSNT_03441___   1096 GCCGTAATCGGTTTTGCTATTATTATGTTTAATTTAATATTCGTAAATCT   1145
                     |||||.|||||.||.||.||||||||||||||.|||||.||.||.|||||
RBAM_021270__    877 GCCGTCATCGGCTTCGCCATTATTATGTTTAACTTAATTTTTGTGAATCT    926

BSNT_03441___   1146 TGTGCTTGCCGGACTTCATTCTTATGCATAG   1176
                     .||||||||||||||||||||.||.||||||
RBAM_021270__    927 CGTGCTTGCCGGACTTCATTCGTACGCATAG    957


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