Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03388 and RBAM_020950

See Amino acid alignment / Visit BSNT_03388 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:36
# Commandline: needle
#    -asequence dna-align/BSNT_03388___hbs.1.9828.seq
#    -bsequence dna-align/RBAM_020950___hupA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03388___hbs-RBAM_020950___hupA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03388___hbs-RBAM_020950___hupA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03388___hbs
# 2: RBAM_020950___hupA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity:     262/279 (93.9%)
# Similarity:   262/279 (93.9%)
# Gaps:           0/279 ( 0.0%)
# Score: 1242.0
# 
#
#=======================================

BSNT_03388___      1 ATGAACAAAACAGAACTTATCAATGCGGTTGCTGAAGCAAGCGAATTGTC     50
                     ||||||||.||||||||.||||||||||||||||||||||||||||||||
RBAM_020950__      1 ATGAACAAGACAGAACTAATCAATGCGGTTGCTGAAGCAAGCGAATTGTC     50

BSNT_03388___     51 TAAAAAAGACGCTACAAAAGCAGTTGACTCTGTTTTTGATACGATCTTAG    100
                     |||||||||||||||||||||||||||.|||||||||||||||||.||||
RBAM_020950__     51 TAAAAAAGACGCTACAAAAGCAGTTGATTCTGTTTTTGATACGATTTTAG    100

BSNT_03388___    101 ATGCACTTAAAAACGGTGATAAAATCCAACTGATCGGTTTTGGTAACTTC    150
                     ||||||||||||||||||||||||||||||||||||||||.||||||||.
RBAM_020950__    101 ATGCACTTAAAAACGGTGATAAAATCCAACTGATCGGTTTCGGTAACTTT    150

BSNT_03388___    151 GAGGTGCGTGAACGTTCTGCACGTAAAGGACGCAACCCTCAAACAGGTGA    200
                     ||||||||.||.||.|||||||||||||||||.|||||.|||||||||||
RBAM_020950__    151 GAGGTGCGCGAGCGCTCTGCACGTAAAGGACGTAACCCGCAAACAGGTGA    200

BSNT_03388___    201 AGAAATCGAAATTCCAGCAAGCAAAGTACCTGCTTTCAAACCAGGTAAAG    250
                     ||||||||||||.||.||||||||.|||||||||||||||||||||||||
RBAM_020950__    201 AGAAATCGAAATCCCTGCAAGCAAGGTACCTGCTTTCAAACCAGGTAAAG    250

BSNT_03388___    251 CGCTTAAAGACGCAGTTGCCGGAAAATAA    279
                     |.|||||||||||.|||||.|||||||||
RBAM_020950__    251 CTCTTAAAGACGCTGTTGCAGGAAAATAA    279


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