Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03386 and RBAM_020940

See Amino acid alignment / Visit BSNT_03386 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:36
# Commandline: needle
#    -asequence dna-align/BSNT_03386___folE.1.9828.seq
#    -bsequence dna-align/RBAM_020940___folE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03386___folE-RBAM_020940___folE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03386___folE-RBAM_020940___folE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03386___folE
# 2: RBAM_020940___folE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 574
# Identity:     475/574 (82.8%)
# Similarity:   475/574 (82.8%)
# Gaps:           2/574 ( 0.3%)
# Score: 1967.0
# 
#
#=======================================

BSNT_03386___      1 ATGAAAGAAGTTAATAAAGAGCAAATCGAACAAGCTGTTCGTCAAATTTT     50
                     ||||||||||||||||||||.||.||.|||||.||.|||||.||.|||||
RBAM_020940__      1 ATGAAAGAAGTTAATAAAGAACAGATTGAACAGGCGGTTCGCCAGATTTT     50

BSNT_03386___     51 AGAAGCGATCGGAGAAGACCCGAATAGAGAAGGGCTTCTTGATACTCCGA    100
                     |||.|||||.||||||||||||.|..|.|||||||||.|.|||||.||||
RBAM_020940__     51 AGAGGCGATTGGAGAAGACCCGGACCGGGAAGGGCTTTTAGATACGCCGA    100

BSNT_03386___    101 AAAGAGTCGCAAAGATGTATGCCGAAGTATTCTCCGGCTTGAATGAAGAT    150
                     ||.|.||.|||||.|||||.||.|||||||||||.||.||.||||||||.
RBAM_020940__    101 AACGCGTGGCAAAAATGTACGCGGAAGTATTCTCGGGATTAAATGAAGAC    150

BSNT_03386___    151 CCAAAAGAACATTTCCAGACTATCTTCGGTGAAAACCATGAGGAGCTTGT    200
                     ||.||||||||.||..|.||..|.|||||.|||.||||||||||||||||
RBAM_020940__    151 CCGAAAGAACACTTTAAAACCGTTTTCGGAGAAGACCATGAGGAGCTTGT    200

BSNT_03386___    201 TCTTGTAAAAGATATCGCGTTTCATTCTATGTGTGAGCATCACCTTGTTC    250
                     |||||||||||||||||||||||||||.||||||||.|||||||||||||
RBAM_020940__    201 TCTTGTAAAAGATATCGCGTTTCATTCCATGTGTGAACATCACCTTGTTC    250

BSNT_03386___    251 CCTTTTATGGAAAAGCACATGTTGCATATATCCCGCGAGGCGGAAAGGTC    300
                     |.|||||.||||||||.|||.||||.||.||.|||||.||||||||.||.
RBAM_020940__    251 CTTTTTACGGAAAAGCGCATATTGCCTACATTCCGCGCGGCGGAAAAGTG    300

BSNT_03386___    301 ACAGGACTCAGCAAACTGGCACGTGCCGTTGAAGCCGTTGCAAAGCGCCC    350
                     ||.||.||.||.|||.||||.||.||.||.||||||||..||||.|||||
RBAM_020940__    301 ACGGGCCTGAGTAAATTGGCGCGGGCGGTGGAAGCCGTCTCAAAACGCCC    350

BSNT_03386___    351 GCAGCTTCAGGAACGCATCACTTCTACAATTGCAGAAAGCATCGTAGAAA    400
                     ||||||.|||||.|||||||||||.||.||||||||||||||||||||.|
RBAM_020940__    351 GCAGCTGCAGGAGCGCATCACTTCAACGATTGCAGAAAGCATCGTAGAGA    400

BSNT_03386___    401 CGCTT-GATCCGCATGGCGTAATGGTAGTGGTTGAAGCGGAACACATGTG    449
                     | ||| |||||.||.|||||.|||||.||.||.|||||.||.||.|||||
RBAM_020940__    401 C-CTTAGATCCCCACGGCGTCATGGTTGTCGTCGAAGCTGAGCATATGTG    449

BSNT_03386___    450 CATGACGATGCGCGGTGTAAGAAAACCGGGTGCGAAAACTGTGACTTCAG    499
                     ||||||||||.|.||.||||||||.||||||||.|||||.||||||||.|
RBAM_020940__    450 CATGACGATGAGGGGCGTAAGAAAGCCGGGTGCAAAAACAGTGACTTCCG    499

BSNT_03386___    500 CAGTCAGAGGCGTTTTTAAAGATGATGCCGCTGCCCGTGCAGAAGTATTG    549
                     |.||.|||||..|||||||||||||.||.||.||.|||.|.|||||.||.
RBAM_020940__    500 CTGTAAGAGGTATTTTTAAAGATGACGCAGCGGCGCGTTCCGAAGTGTTA    549

BSNT_03386___    550 GAACATATTAAACGCCAGGACTAA    573
                     ||||||||||||||...|||.|||
RBAM_020940__    550 GAACATATTAAACGTGCGGATTAA    573


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