Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03382 and RBAM_020910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:35
# Commandline: needle
# -asequence dna-align/BSNT_03382___ubiE.1.9828.seq
# -bsequence dna-align/RBAM_020910___ubiE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03382___ubiE-RBAM_020910___ubiE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03382___ubiE-RBAM_020910___ubiE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03382___ubiE
# 2: RBAM_020910___ubiE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 703
# Identity: 612/703 (87.1%)
# Similarity: 612/703 (87.1%)
# Gaps: 2/703 ( 0.3%)
# Score: 2684.0
#
#
#=======================================
BSNT_03382___ 1 ATGCAGGACTCAAAAGAACAGCGCGTACACGGAGTATTTGAAAAAATATA 50
||||||||.|||||||||||||||||||||||.||.|||||||||||.||
RBAM_020910__ 1 ATGCAGGAGTCAAAAGAACAGCGCGTACACGGCGTGTTTGAAAAAATCTA 50
BSNT_03382___ 51 TAAAAACTATGACCAAATGAACTCTGTCATCAGTTTTCAGCAGCATAAAA 100
||||||.||||||||||||||||||||.||||||||||||||||||||||
RBAM_020910__ 51 TAAAAATTATGACCAAATGAACTCTGTTATCAGTTTTCAGCAGCATAAAA 100
BSNT_03382___ 101 AATGGCGCGATAAAACGATGCGCATCATGAATGTAAAAGAAGGCGCAAAA 150
|||||||||||||||||||||..|||||||||||||||||||||||||||
RBAM_020910__ 101 AATGGCGCGATAAAACGATGCAGATCATGAATGTAAAAGAAGGCGCAAAA 150
BSNT_03382___ 151 GCACTTGATGTCTGCTGCGGAACGGCTGACTGGACGATCGCTCTTGCAAA 200
||.|||||||||||||||||||||||||||||||||||.||.||.|||.|
RBAM_020910__ 151 GCGCTTGATGTCTGCTGCGGAACGGCTGACTGGACGATTGCCCTCGCAGA 200
BSNT_03382___ 201 AGCGGCCGGCAAAAGCGGCGAGATCAAGGGCTTGGATTTCAGTGAAAATA 250
|||||||||.|||||||||||.|||||.||..||||||||||..||||||
RBAM_020910__ 201 AGCGGCCGGAAAAAGCGGCGAAATCAAAGGACTGGATTTCAGCAAAAATA 250
BSNT_03382___ 251 TGCTGAGTGTCGGCGAGCAGAAAGTAAAAGACGGCGGATTCAGCCAAATT 300
|||||||..||||.|||.|.|||||.|||||.|||||.|.||||||||||
RBAM_020910__ 251 TGCTGAGCATCGGTGAGAAAAAAGTGAAAGAGGGCGGTTACAGCCAAATT 300
BSNT_03382___ 301 GAACTGCTGCACGGAAATGCGATGGAGCTTCCTTTTGATGATGATACATT 350
||.||..||||||||||||||||||||||||||||.|.|||||||.|.||
RBAM_020910__ 301 GAGCTTTTGCACGGAAATGCGATGGAGCTTCCTTTCGCTGATGATTCTTT 350
BSNT_03382___ 351 TGATTATGTCACCATTGGCTTCGGGCTCCGCAATGTCCCTGATTACTTGA 400
|||||.|||||||||.|||||||||||.||.||.||.||.||.||..|||
RBAM_020910__ 351 TGATTTTGTCACCATCGGCTTCGGGCTGCGGAACGTTCCCGACTATCTGA 400
BSNT_03382___ 401 CTGTACTGAAAGAGATGAGACGTGTAGTGAAGCCGGGCGGGCAGGTGGTA 450
|.||.||||||||.|||.|.||.||.||.||.||||||||||||||.|||
RBAM_020910__ 401 CCGTGCTGAAAGAAATGCGGCGGGTCGTCAAACCGGGCGGGCAGGTTGTA 450
BSNT_03382___ 451 TGTCTGGAAACGTCCCAGCCGGAAATGATCGGATTCAGACAGGCTTACTT 500
|||||||||||.|||||||||||||||.||||||||||||||||.||.||
RBAM_020910__ 451 TGTCTGGAAACATCCCAGCCGGAAATGTTCGGATTCAGACAGGCATATTT 500
BSNT_03382___ 501 TATGTACTTTAAGTATATTATGCCGTTTTTCGGGAAACTGTTTGCGAAGA 550
|.|.||.|||||.||.||.|||||.||.|||||.|||.||||||||||||
RBAM_020910__ 501 TCTTTATTTTAAATACATCATGCCTTTCTTCGGAAAAATGTTTGCGAAGA 550
BSNT_03382___ 551 GCTATAAAGAATATTCTTGGCTTCAAGAATCAGCCAGAG-ATTTCCCTGG 599
|||||||||||||||||||||||||||||||.||.|||| ||||||| ||
RBAM_020910__ 551 GCTATAAAGAATATTCTTGGCTTCAAGAATCGGCAAGAGAATTTCCC-GG 599
BSNT_03382___ 600 AATGAAGGAACTGGCAGGCCTGTTTGAAGAGGCGGGCCTGAAAAATGTTA 649
.|||||.||.||.||..|.|||||||||||.||||||||||..|||||.|
RBAM_020910__ 600 TATGAAAGAGCTTGCGCGTCTGTTTGAAGAAGCGGGCCTGACGAATGTCA 649
BSNT_03382___ 650 AATATCATTCGTTTACTGGCGGAGTCGCTGCCACGCATATCGGATGGAAA 699
||||.|||||||||||.||||||||.||.||.|||||||||||.||||||
RBAM_020910__ 650 AATACCATTCGTTTACCGGCGGAGTGGCCGCTACGCATATCGGTTGGAAA 699
BSNT_03382___ 700 TGA 702
|||
RBAM_020910__ 700 TGA 702
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