Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03382 and RBAM_020910

See Amino acid alignment / Visit BSNT_03382 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:35
# Commandline: needle
#    -asequence dna-align/BSNT_03382___ubiE.1.9828.seq
#    -bsequence dna-align/RBAM_020910___ubiE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03382___ubiE-RBAM_020910___ubiE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03382___ubiE-RBAM_020910___ubiE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03382___ubiE
# 2: RBAM_020910___ubiE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 703
# Identity:     612/703 (87.1%)
# Similarity:   612/703 (87.1%)
# Gaps:           2/703 ( 0.3%)
# Score: 2684.0
# 
#
#=======================================

BSNT_03382___      1 ATGCAGGACTCAAAAGAACAGCGCGTACACGGAGTATTTGAAAAAATATA     50
                     ||||||||.|||||||||||||||||||||||.||.|||||||||||.||
RBAM_020910__      1 ATGCAGGAGTCAAAAGAACAGCGCGTACACGGCGTGTTTGAAAAAATCTA     50

BSNT_03382___     51 TAAAAACTATGACCAAATGAACTCTGTCATCAGTTTTCAGCAGCATAAAA    100
                     ||||||.||||||||||||||||||||.||||||||||||||||||||||
RBAM_020910__     51 TAAAAATTATGACCAAATGAACTCTGTTATCAGTTTTCAGCAGCATAAAA    100

BSNT_03382___    101 AATGGCGCGATAAAACGATGCGCATCATGAATGTAAAAGAAGGCGCAAAA    150
                     |||||||||||||||||||||..|||||||||||||||||||||||||||
RBAM_020910__    101 AATGGCGCGATAAAACGATGCAGATCATGAATGTAAAAGAAGGCGCAAAA    150

BSNT_03382___    151 GCACTTGATGTCTGCTGCGGAACGGCTGACTGGACGATCGCTCTTGCAAA    200
                     ||.|||||||||||||||||||||||||||||||||||.||.||.|||.|
RBAM_020910__    151 GCGCTTGATGTCTGCTGCGGAACGGCTGACTGGACGATTGCCCTCGCAGA    200

BSNT_03382___    201 AGCGGCCGGCAAAAGCGGCGAGATCAAGGGCTTGGATTTCAGTGAAAATA    250
                     |||||||||.|||||||||||.|||||.||..||||||||||..||||||
RBAM_020910__    201 AGCGGCCGGAAAAAGCGGCGAAATCAAAGGACTGGATTTCAGCAAAAATA    250

BSNT_03382___    251 TGCTGAGTGTCGGCGAGCAGAAAGTAAAAGACGGCGGATTCAGCCAAATT    300
                     |||||||..||||.|||.|.|||||.|||||.|||||.|.||||||||||
RBAM_020910__    251 TGCTGAGCATCGGTGAGAAAAAAGTGAAAGAGGGCGGTTACAGCCAAATT    300

BSNT_03382___    301 GAACTGCTGCACGGAAATGCGATGGAGCTTCCTTTTGATGATGATACATT    350
                     ||.||..||||||||||||||||||||||||||||.|.|||||||.|.||
RBAM_020910__    301 GAGCTTTTGCACGGAAATGCGATGGAGCTTCCTTTCGCTGATGATTCTTT    350

BSNT_03382___    351 TGATTATGTCACCATTGGCTTCGGGCTCCGCAATGTCCCTGATTACTTGA    400
                     |||||.|||||||||.|||||||||||.||.||.||.||.||.||..|||
RBAM_020910__    351 TGATTTTGTCACCATCGGCTTCGGGCTGCGGAACGTTCCCGACTATCTGA    400

BSNT_03382___    401 CTGTACTGAAAGAGATGAGACGTGTAGTGAAGCCGGGCGGGCAGGTGGTA    450
                     |.||.||||||||.|||.|.||.||.||.||.||||||||||||||.|||
RBAM_020910__    401 CCGTGCTGAAAGAAATGCGGCGGGTCGTCAAACCGGGCGGGCAGGTTGTA    450

BSNT_03382___    451 TGTCTGGAAACGTCCCAGCCGGAAATGATCGGATTCAGACAGGCTTACTT    500
                     |||||||||||.|||||||||||||||.||||||||||||||||.||.||
RBAM_020910__    451 TGTCTGGAAACATCCCAGCCGGAAATGTTCGGATTCAGACAGGCATATTT    500

BSNT_03382___    501 TATGTACTTTAAGTATATTATGCCGTTTTTCGGGAAACTGTTTGCGAAGA    550
                     |.|.||.|||||.||.||.|||||.||.|||||.|||.||||||||||||
RBAM_020910__    501 TCTTTATTTTAAATACATCATGCCTTTCTTCGGAAAAATGTTTGCGAAGA    550

BSNT_03382___    551 GCTATAAAGAATATTCTTGGCTTCAAGAATCAGCCAGAG-ATTTCCCTGG    599
                     |||||||||||||||||||||||||||||||.||.|||| ||||||| ||
RBAM_020910__    551 GCTATAAAGAATATTCTTGGCTTCAAGAATCGGCAAGAGAATTTCCC-GG    599

BSNT_03382___    600 AATGAAGGAACTGGCAGGCCTGTTTGAAGAGGCGGGCCTGAAAAATGTTA    649
                     .|||||.||.||.||..|.|||||||||||.||||||||||..|||||.|
RBAM_020910__    600 TATGAAAGAGCTTGCGCGTCTGTTTGAAGAAGCGGGCCTGACGAATGTCA    649

BSNT_03382___    650 AATATCATTCGTTTACTGGCGGAGTCGCTGCCACGCATATCGGATGGAAA    699
                     ||||.|||||||||||.||||||||.||.||.|||||||||||.||||||
RBAM_020910__    650 AATACCATTCGTTTACCGGCGGAGTGGCCGCTACGCATATCGGTTGGAAA    699

BSNT_03382___    700 TGA    702
                     |||
RBAM_020910__    700 TGA    702


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