Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03381 and RBAM_020900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:35
# Commandline: needle
# -asequence dna-align/BSNT_03381___hepT.1.9828.seq
# -bsequence dna-align/RBAM_020900___hepT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03381___hepT-RBAM_020900___hepT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03381___hepT-RBAM_020900___hepT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03381___hepT
# 2: RBAM_020900___hepT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1052
# Identity: 766/1052 (72.8%)
# Similarity: 766/1052 (72.8%)
# Gaps: 91/1052 ( 8.7%)
# Score: 3029.0
#
#
#=======================================
BSNT_03381___ 0 -------------------------------------------------- 0
RBAM_020900__ 1 ATGTCAAATACCATTCGTTTACCGGCGGAGTGGCCGCTACGCATATCGGT 50
BSNT_03381___ 1 -------------------------------------ATGAAATTTAAAA 13
|||||||||||||
RBAM_020900__ 51 TGGAAATGATGAATATACAGATGTTTGGGTGAATGATATGAAATTTAAAA 100
BSNT_03381___ 14 TGGCCTACTCTTTTTTAAATGACGATATTGATGTAATCGAAAGAGAACTT 63
|||||||.||||||||||||||||||||||||||.||||||||.||.|||
RBAM_020900__ 101 TGGCCTATTCTTTTTTAAATGACGATATTGATGTGATCGAAAGGGAGCTT 150
BSNT_03381___ 64 GAACAAACCGTACGTTCCGATTACCCGCTTT--TAAGCGAGGCAGGTCTT 111
||.|||||.||.||.||.||.||.| |||| |.||.||.||.||.||.
RBAM_020900__ 151 GAGCAAACGGTGCGGTCAGACTATC--CTTTGCTGAGTGAAGCCGGGCTC 198
BSNT_03381___ 112 CACCTGCTGCAGGCCGGAGGGAAACGTATTCGTCCTGTTTTCGTGCTGCT 161
||.|||||.|||||.||.||.||.||.||.||.|||||||||||..||||
RBAM_020900__ 199 CATCTGCTCCAGGCGGGCGGCAAGCGGATCCGCCCTGTTTTCGTATTGCT 248
BSNT_03381___ 162 TTCTGGCATGTTTGGCGATTACGATATTAATAAGATTAAATATGTCGCCG 211
|||.||||||||.|||||.||.||.||||||||.||.||||||||.||.|
RBAM_020900__ 249 TTCCGGCATGTTCGGCGACTATGACATTAATAAAATAAAATATGTTGCGG 298
BSNT_03381___ 212 TCACTCTGGAAATGATTCACATGGCATCTTTGGTTCATGATGATGTCATT 261
|.||.||||||||||||||.|||||.||..|.||.|||||.||.||||||
RBAM_020900__ 299 TGACGCTGGAAATGATTCATATGGCGTCCCTCGTGCATGACGACGTCATT 348
BSNT_03381___ 262 GATGATGCAGAGCTTCGCCGAGGAAAACCGACAATCAAAGCAAAGTGGGA 311
|||||.||.|||||.||..|.|||||||||||.||||||||.||||||||
RBAM_020900__ 349 GATGACGCCGAGCTGCGGAGGGGAAAACCGACCATCAAAGCCAAGTGGGA 398
BSNT_03381___ 312 CAATCGTATTGCGATGTACACAGGCGATTATATGCTTGCGGGATCTCTTG 361
|||.||.||.||.|||||.||.||.|||||||||||||||||.||.||||
RBAM_020900__ 399 CAACCGCATCGCCATGTATACCGGTGATTATATGCTTGCGGGCTCACTTG 448
BSNT_03381___ 362 AAATGATGACGAGAATTAACGAACCGAAAGCCCATAGGATTTTGTCACAG 411
|.||||||||||||.|..|.||.|||||||||||..||||..||||..|.
RBAM_020900__ 449 AGATGATGACGAGATTGGATGAGCCGAAAGCCCACCGGATCCTGTCCAAA 498
BSNT_03381___ 412 ACGATCGTTGAAGTTTGTCTAGGGGAAATTGAGCAGATCAAAGACAAATA 461
||.|||||.|||||.||.||.||.||||||||.|||||||.|||.|||||
RBAM_020900__ 499 ACCATCGTAGAAGTATGCCTCGGAGAAATTGAACAGATCAGAGATAAATA 548
BSNT_03381___ 462 TAACATGGAACAAAATCTCAGAACGTATCTCCGCCGTATCAAAAGAAAAA 511
.||.|||||||||||.||||||||.|||.|.|||||.||||||.|.||||
RBAM_020900__ 549 CAATATGGAACAAAACCTCAGAACCTATTTGCGCCGCATCAAACGGAAAA 598
BSNT_03381___ 512 CAGCTCTCTTGATCGCGGTCAGCTGCCAGCTTGGTGCCATTGCGTCTGGA 561
|.|||||..|.||.||.||||||||||||||.||.|||||.||.||.|||
RBAM_020900__ 599 CGGCTCTTCTCATTGCCGTCAGCTGCCAGCTCGGCGCCATCGCTTCGGGA 648
BSNT_03381___ 562 GCTGATGAGAAGATTCATAAGGCATTGTACTGGTTTGGGTATTACGTCGG 611
|||||||||||||||||.||.|||||.||.|||||.||.||||||||.||
RBAM_020900__ 649 GCTGATGAGAAGATTCACAAAGCATTATATTGGTTCGGTTATTACGTGGG 698
BSNT_03381___ 612 CATGTCTTATCAGATTATTGATGATATTCTTGATTTTACTTCAACTGAAG 661
||||||.||||||||||||||.||.|||||||||||.||||||||.||||
RBAM_020900__ 699 CATGTCCTATCAGATTATTGACGACATTCTTGATTTCACTTCAACGGAAG 748
BSNT_03381___ 662 AAGAGCTGGGTAAACCCGTTGGAGGAGATTTGCTTCAAGGAAACGTCACA 711
|.||.|||||.|||||.||.|||||.|||.||||.||||||||.|||||.
RBAM_020900__ 749 AGGAACTGGGAAAACCGGTCGGAGGGGATCTGCTGCAAGGAAATGTCACT 798
BSNT_03381___ 712 TTGCCAGTGCTGTATGCCCTGAAAAATCCTGCATTAAAAAACCAGCTTAA 761
.||||.||..||||.||.||.....|.||||.|||.|||||.|||||.||
RBAM_020900__ 799 CTGCCCGTTTTGTACGCGCTCCGTCAGCCTGAATTGAAAAATCAGCTGAA 848
BSNT_03381___ 762 ATTGATTAACAGTGAGACAACGCAGGAGCAGCTTGAACCAATCATTGAAG 811
|||.|||||||||||.|||||.|||||||||||.|..||.||.||||||.
RBAM_020900__ 849 ATTAATTAACAGTGAAACAACACAGGAGCAGCTCGCCCCCATTATTGAAA 898
BSNT_03381___ 812 AAATCAAAAAAACAGATGCAATTGAAGCATCTATGGCAGTAAGCGAAATG 861
|.||.|||...|||||.||.||||||..|||.|||||.||.||.||.|.|
RBAM_020900__ 899 ATATTAAACGCACAGACGCGATTGAAAAATCAATGGCCGTCAGTGACAGG 948
BSNT_03381___ 862 TATCTGCAGAAAGCTTTTCAGAAATTAAACACGCTTCCACGAGGGCGCGC 911
||..|..|.|||||.|||.|.|||.|.||.||.||.||..||||.||.||
RBAM_020900__ 949 TACTTAAAAAAAGCGTTTGAAAAACTGAATACACTGCCGAGAGGACGTGC 998
BSNT_03381___ 912 ACGCTCGTCTCTTGCAGCCATCGCAAAATATATCGGTAAAAGAAAATTTT 961
.|||||.||..|.||.||||||||.|||||||||||.|||.|.|||||||
RBAM_020900__ 999 GCGCTCATCATTGGCCGCCATCGCCAAATATATCGGCAAACGGAAATTTT 1048
BSNT_03381___ 962 AA 963
||
RBAM_020900__ 1049 AA 1050
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