Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03376 and RBAM_020870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:35
# Commandline: needle
# -asequence dna-align/BSNT_03376___aroF.1.9828.seq
# -bsequence dna-align/RBAM_020870___aroF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03376___aroF-RBAM_020870___aroF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03376___aroF-RBAM_020870___aroF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03376___aroF
# 2: RBAM_020870___aroF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1193
# Identity: 960/1193 (80.5%)
# Similarity: 960/1193 (80.5%)
# Gaps: 22/1193 ( 1.8%)
# Score: 3916.0
#
#
#=======================================
BSNT_03376___ 1 ATGAAGGGAGAAGAAGTCATGAGATATTTAACAGCCGGAGAATCACACGG 50
||||||||.|||||||||||||||||||||||
RBAM_020870__ 1 ------------------ATGAGATACTTAACAGCCGGAGAATCACACGG 32
BSNT_03376___ 51 CCCCCAACTGACAACCATTATTGAGGGTGTACCTGCCGGGCTTTACATAA 100
.||.||.|||||.||.|||||.||.|||||.|||||.||||||||.||||
RBAM_020870__ 33 TCCGCAGCTGACGACAATTATAGAAGGTGTGCCTGCGGGGCTTTATATAA 82
BSNT_03376___ 101 CGGAGGAAGATATCAATTTTGAGCTTGCCAGACGCCAAAAAGGACACGGC 150
|.||.|||||.||.||||||||||||||||||||.||||||||.||||||
RBAM_020870__ 83 CTGAAGAAGACATTAATTTTGAGCTTGCCAGACGTCAAAAAGGGCACGGC 132
BSNT_03376___ 151 CGCGGCCGCCGCATGCAGATCGAAAAAGACCAG-GCCAAAATTATGAGCG 199
|||||.||||||||||||||.||||..|| ||| ||.||.||.|..||||
RBAM_020870__ 133 CGCGGACGCCGCATGCAGATTGAAACGGA-CAGAGCGAAGATCACAAGCG 181
BSNT_03376___ 200 GGGTGCGCCATGCACGTACACTCGGTTCACCAATTGCTCTCGTAGTTGAA 249
|.|||||.|||||.||.||||||||||||||.||.||.|||||.||.|||
RBAM_020870__ 182 GCGTGCGGCATGCCCGGACACTCGGTTCACCGATCGCGCTCGTTGTAGAA 231
BSNT_03376___ 250 AATAACGATTGGAAGCATTGGACAAAAATCATGGGCGCCGCCCCGATTAC 299
|||||.||.||||..||.|||||||||||||||||||||||.||||||||
RBAM_020870__ 232 AATAAAGACTGGACTCACTGGACAAAAATCATGGGCGCCGCACCGATTAC 281
BSNT_03376___ 300 AGAAGATGAAGAAAAGGAAATGAAGCGCCAGATTTCCAGACCTAGACCTG 349
||||||.|||||||..||||||||.|||||||||||.|||||.|||||.|
RBAM_020870__ 282 AGAAGAAGAAGAAAGTGAAATGAAACGCCAGATTTCAAGACCGAGACCGG 331
BSNT_03376___ 350 GGCACGCTGACTTAAACGGTGCAATTAAATATAATCATCGTGATATGAGA 399
|.|||||.||.||.||||||||.|||||.||||||||.||||||||||||
RBAM_020870__ 332 GACACGCAGATTTGAACGGTGCTATTAAGTATAATCACCGTGATATGAGA 381
BSNT_03376___ 400 AATGTGCTTGAGCGTTCTTCAGCAAGGGAAACAACTGTCAGAGTGGCGGC 449
||||||.|.||.||.|||||.||..|.||.|||||.||..|.|||||.||
RBAM_020870__ 382 AATGTGTTAGAACGATCTTCCGCGCGTGAGACAACGGTTCGCGTGGCTGC 431
BSNT_03376___ 450 AGGGGCTGTAGCTAAAAAGATTCTTTCTGAGCTTGGCATTAAGGTGGCGG 499
.||.||.||.||||||||||||.|..||||||||||||||||.||.||.|
RBAM_020870__ 432 CGGAGCCGTCGCTAAAAAGATTTTAGCTGAGCTTGGCATTAAAGTCGCCG 481
BSNT_03376___ 500 GCCACGTGTTGCAAATTGGC-GCTGTTAAAGCTGAAAAAACAGAATATAC 548
|.||.||..|||||||.||| || ||.|||||.||.|||||.||.||.||
RBAM_020870__ 482 GACATGTCCTGCAAATCGGCAGC-GTAAAAGCAGAGAAAACCGATTACAC 530
BSNT_03376___ 549 GTCAATTGAAGACCTGCAGCGCGTAACGGAAGAGTCTCCTGTCAGATGCT 598
.||.|||||.||.||..|.||.|||||||||||.||.||.||||||||||
RBAM_020870__ 531 ATCCATTGAGGATCTCAAACGGGTAACGGAAGAATCACCGGTCAGATGCT 580
BSNT_03376___ 599 ACGATGAAGAGGCAGGCAAAAAAATGATGGCTGCCATTGATGAAGCAAAG 648
||||||||||.||||||....||||||||||.||||||||||||||.|||
RBAM_020870__ 581 ACGATGAAGAAGCAGGCCGTCAAATGATGGCAGCCATTGATGAAGCGAAG 630
BSNT_03376___ 649 GCAAACGGAGATTCCATCGGCGGAATAGTAGAAGTCATTGTCGAGGGAAT 698
||||||||.||.||.|||||||||||.||.|||||.||.|||||.||.||
RBAM_020870__ 631 GCAAACGGCGACTCGATCGGCGGAATCGTTGAAGTGATCGTCGAAGGTAT 680
BSNT_03376___ 699 GCCGGTAGGCGTGGGCAGCTATGTCCATTATGACCGCAAACTGGATAGCA 748
||||||.||.||.||.|||||||||||.||||||||.||.|||||.||||
RBAM_020870__ 681 GCCGGTCGGTGTCGGAAGCTATGTCCACTATGACCGTAAGCTGGACAGCA 730
BSNT_03376___ 749 AGCTTGCTGCCGCTGTACTGTCAATTAATGCATTTAAAGGTGTGGAATTC 798
||||.|||||.||.||.|||||.|||||.||.||||||||.||.||.|||
RBAM_020870__ 731 AGCTCGCTGCTGCCGTTCTGTCGATTAACGCGTTTAAAGGCGTAGAGTTC 780
BSNT_03376___ 799 GGGATCGGATTTGAGGCGGCAGGCCGAAATGGAAGCGAAGTCCATGACGA 848
||.|||||.|||||.|||||.|||..|||.||.||.|||||.|||||.||
RBAM_020870__ 781 GGCATCGGTTTTGAAGCGGCCGGCAAAAACGGCAGTGAAGTTCATGATGA 830
BSNT_03376___ 849 GATCATTTGGGACGAGGAAAAAGGATACACCCGTGCTACTAACAGACTTG 898
.|||.|.|||||.||.||.|||||.||.||.||.||.||.|||||.||.|
RBAM_020870__ 831 AATCGTATGGGATGAAGAGAAAGGCTATACACGCGCCACAAACAGGCTCG 880
BSNT_03376___ 899 GCGGACTGGAAGGCGGCATGACGACAGGGATGCCAATCGTTGTCCGCGGA 948
|.|||.|.||||||||.||||||||.||.|||||.||.||.||||||||.
RBAM_020870__ 881 GAGGATTAGAAGGCGGTATGACGACGGGAATGCCGATTGTCGTCCGCGGC 930
BSNT_03376___ 949 GTCATGAAGCCGATTCCGACTTTGTATAAACCTCTGAAAAGTGTCGATAT 998
||.|||||.|||||.||.||||||||.||.||.||||||||.|||||.||
RBAM_020870__ 931 GTTATGAAACCGATCCCTACTTTGTACAAGCCGCTGAAAAGCGTCGACAT 980
BSNT_03376___ 999 TGAAACGAAAGAACCGTTTTCCGCCAGCATTGAACGTTCAGACAGCTGTG 1048
|||||||||||||||||||.|.||.|||||||||||||||||||||||||
RBAM_020870__ 981 TGAAACGAAAGAACCGTTTACAGCGAGCATTGAACGTTCAGACAGCTGTG 1030
BSNT_03376___ 1049 CTGTTCCTGCGGCAAGTGTAGTCGCTGAAGCGGCTGTCGCTTGGGAAATT 1098
|.|||||.||.|||||||||||.||||||||.||.||.||.||||||||.
RBAM_020870__ 1031 CGGTTCCGGCAGCAAGTGTAGTGGCTGAAGCAGCAGTGGCCTGGGAAATC 1080
BSNT_03376___ 1099 GCGAACGCAGTCGTTGAACAATTCGGATTAGATCAAATTGACCGCATTAG 1148
||.||.||.|||||.|||||||||||..|.||.||.||.|||||.||||.
RBAM_020870__ 1081 GCAAATGCCGTCGTAGAACAATTCGGGCTTGACCAGATCGACCGAATTAA 1130
BSNT_03376___ 1149 AGAAAATGTGGAGAATATGAGAAAACTGTCGAGGGAATTTTAA 1191
|||||||||.||.||.||||.||||.|.|||||||||||.|.|
RBAM_020870__ 1131 AGAAAATGTTGAAAACATGAAAAAATTATCGAGGGAATTCTGA 1173
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