Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03375 and RBAM_020860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:35
# Commandline: needle
# -asequence dna-align/BSNT_03375___aroB.1.9828.seq
# -bsequence dna-align/RBAM_020860___aroB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03375___aroB-RBAM_020860___aroB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03375___aroB-RBAM_020860___aroB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03375___aroB
# 2: RBAM_020860___aroB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1144
# Identity: 802/1144 (70.1%)
# Similarity: 802/1144 (70.1%)
# Gaps: 110/1144 ( 9.6%)
# Score: 2694.5
#
#
#=======================================
BSNT_03375___ 1 ATG-AAGACACTGCATGTTCAAACTGCTTCCTCGTCATATCCTGTTTTTA 49
||| |||| .||..|.||||..||.||||||||..|||||||.||.|.||
RBAM_020860__ 1 ATGAAAGA-GCTTGAGGTTCGGACAGCTTCCTCCGCATATCCCGTGTATA 49
BSNT_03375___ 50 TCGGACAAGGTATCAGAAAAAAGGC--TTGCGAACTATTAACCTCTTTAA 97
||||..|||||||.||.|||.|||| .||| .||.||..|.||..|.|
RBAM_020860__ 50 TCGGTGAAGGTATAAGGAAACAGGCCGCTGC--CCTTTTGTCTTCACTGA 97
BSNT_03375___ 98 ACAGGCCTTTAACAAGGATTATGCTTGTCACGGATGAAGAAGTGGACCGC 147
|||||||..|.||||.|||..|.||..|||..||||..|||||.|||||.
RBAM_020860__ 98 ACAGGCCGCTGACAAAGATCCTTCTCATCATCGATGCTGAAGTTGACCGG 147
BSNT_03375___ 148 CTGTATGGTGATGAAATGCTCC--ATTTGCTGCAAGATAAATGGCCTGTG 195
||.||.||||||||.|||.||| .||| |..|.||.|.||||||.|||
RBAM_020860__ 148 CTTTACGGTGATGAGATGTTCCGGCTTT--TAAACGAAACATGGCCCGTG 195
BSNT_03375___ 196 AAAAAAGTGACGGTACCGAGTGGAGAGCAGGCAAAATCCATGGACATGTA 245
||||||||||..||.||.||.|||||..|.||.||||| |.||
RBAM_020860__ 196 AAAAAAGTGATCGTTCCAAGCGGAGAAGAAGCGAAATC--------TCTA 237
BSNT_03375___ 246 CACAAA------------ATTGCAGAGTGAAGCGATTCG-TTTTCATTTG 282
||| ||| ||.|..||||||| ||| |||.|||.||
RBAM_020860__ 238 ---AAAGAGTATGAACGGATT-CAAACGGAAGCGA-TCGCTTTCCATATG 282
BSNT_03375___ 283 GATCGCTCCTCATGCATCATCGCATTCGGTGGCGGTGTTGTAGGG-GATC 331
||.|||||||||||.||.|||||.|||||.|||||.| ||..||| |||.
RBAM_020860__ 283 GACCGCTCCTCATGTATGATCGCCTTCGGAGGCGGCG-TGACGGGTGATT 331
BSNT_03375___ 332 TTGCCGG-TTTTGTGGCTGCCACTTTTATGCGCGGCATTGATTTCATCCA 380
|.||||| ||||| .||.||.||||||||||||||.|||||||||||.||
RBAM_020860__ 332 TGGCCGGCTTTTG-CGCAGCAACTTTTATGCGCGGAATTGATTTCATTCA 380
BSNT_03375___ 381 AATGCCTACGACGCT-CTTGGCGCATGACAGCGCAGTCGGAGGAAAAGTA 429
||||||.||.||.|| ||| ||.|||||||||||.|||||.||.||.||.
RBAM_020860__ 381 AATGCCGACAACACTGCTT-GCCCATGACAGCGCGGTCGGCGGCAAGGTG 429
BSNT_03375___ 430 GCCGTGAACCATCCGCTTGGAAAAAATCTAATCGGTGCGTTTTATCAGCC 479
|||||.||||||...||.|||||.||..|||||||.||||||||||||||
RBAM_020860__ 430 GCCGTCAACCATAAACTCGGAAAGAACTTAATCGGCGCGTTTTATCAGCC 479
BSNT_03375___ 480 GAAAGCCGTGCTCTATGATACAGATTTCCTGCGTTCT-------CTGCCT 522
||||||.|||.|.||.|||||.|| || |||| |||||.
RBAM_020860__ 480 GAAAGCGGTGATTTACGATACGGA------GC-TTCTGAAAACCCTGCCG 522
BSNT_03375___ 523 GAAAAAGAGCTTAGGTCCGGAATGGCAGAAGTGATTAAACACGCTTTTAT 572
|||.|||||||.||.||.||.|||||.||||||||.||||||||.|||||
RBAM_020860__ 523 GAACAAGAGCTGAGATCGGGCATGGCTGAAGTGATCAAACACGCGTTTAT 572
BSNT_03375___ 573 CTATGA-CAGAGCGTTTCTGGAGGAGCTGCTGAATATCCAC-----TCAC 616
|...|| || .||.|||.|.||..|.||.|| ||| .|||
RBAM_020860__ 573 CGCCGATCA-TGCTTTTTTAGAAAAACTTCT-------CACGTTTGACAC 614
BSNT_03375___ 617 --TGCGTGATATCACTAATGATCAGCTGAATGACATGATTTTTAAAGGCA 664
|||..|...|.||.|..|.|.||||||||||.|||||||.||||||.|
RBAM_020860__ 615 GTTGCAAGGACTGACAAGCGCTGAGCTGAATGAAATGATTTATAAAGGAA 664
BSNT_03375___ 665 TTTCAATTAAAGCGTCTGTCGTTCAGCAGGATGAAAAAGAAGAGGGGATA 714
|||||||.|||.||.|.|||||.|...||||.|||||.||||||||||||
RBAM_020860__ 665 TTTCAATCAAATCGGCCGTCGTGCGTGAGGACGAAAAGGAAGAGGGGATA 714
BSNT_03375___ 715 AGAGCTTACTTAAACTTCGGGCATACGCTCGGTCATGCCGTTGAGGCGGA 764
|||||||...|.||.|||||.|||||||||||.|||||||||||||||||
RBAM_020860__ 715 AGAGCTTTTCTGAATTTCGGCCATACGCTCGGCCATGCCGTTGAGGCGGA 764
BSNT_03375___ 765 ATATGGATACGGGCAGATCACTCACGGTGATGCCGTAGCCCTCGGAATGC 814
|||.||.|||||.|.|||.||.||.||.|||||.||.||||||||.||||
RBAM_020860__ 765 ATACGGCTACGGACGGATTACACATGGAGATGCGGTCGCCCTCGGCATGC 814
BSNT_03375___ 815 AGTTTGCTTTATATATAAGCGAAAAGACTGTAGGCTGTGAAATGGACAGA 864
|||||||..|.||..|.||.|||.||..||.|.|.||..|.|||.||||.
RBAM_020860__ 815 AGTTTGCCCTTTACGTGAGTGAACAGGTTGCACGTTGCAAGATGAACAGG 864
BSNT_03375___ 865 AAA----------------CGTTTGGTCAGCT-GGCTAAAAAGCCTGGGT 897
||| .|.|||| ||| ||||| ||.|||
RBAM_020860__ 865 AAAGAACTCACACAATGGCTGATTGG---GCTCGGCTA-----CCCGGG- 905
BSNT_03375___ 898 TATCCAAGTCAAATCAGAAAAGAGACGGAAACTTCGGTTCTCTTGGACCG 947
||| .||||||.||||.|..|||||..|||||||||..|.|||
RBAM_020860__ 906 -----AAG---CATCAGACAAGATATTGAAACGCCGGTTCTCTCCGCCCG 947
BSNT_03375___ 948 TATGATGAATGATAAGAAAACCCGTGGCGGGAAGATTCAGTTTATTGTGC 997
.||||||||||||||.|||||.||.||.||.|.||..|||||.||.|||.
RBAM_020860__ 948 GATGATGAATGATAAAAAAACGCGCGGAGGCATGACACAGTTCATCGTGT 997
BSNT_03375___ 998 TCAATGAATTAGGGAAAGTTGCTGATCATACAT--TTTCCAGAAATGAAC 1045
|.||.||||||||..||| .||.|..| |.||| ||||.|.|.||||.|
RBAM_020860__ 998 TAAAGGAATTAGGCGAAG-CGCGGGAC-TGCATGCTTTCAAAAGATGAGC 1045
BSNT_03375___ 1046 TTGAGAGCTGGCTGAACAAATGGCGATTGGAGGAGACATCATGA 1089
|.||.|..|.||||||||||||||||.|||||||.|||.|||||
RBAM_020860__ 1046 TCGAAAATTTGCTGAACAAATGGCGAATGGAGGAAACAGCATGA 1089
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