Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03364 and RBAM_020780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:34
# Commandline: needle
# -asequence dna-align/BSNT_03364___hisC.1.9828.seq
# -bsequence dna-align/RBAM_020780___hisC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03364___hisC-RBAM_020780___hisC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03364___hisC-RBAM_020780___hisC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03364___hisC
# 2: RBAM_020780___hisC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1099
# Identity: 828/1099 (75.3%)
# Similarity: 828/1099 (75.3%)
# Gaps: 32/1099 ( 2.9%)
# Score: 3044.5
#
#
#=======================================
BSNT_03364___ 1 TTGCGTATCAAAGAACATTTAAAACAGCTGAAGCCTTATCAGCCTGGAAA 50
||||..||.||||||||..|....||||||||.||.||||||||.||.||
RBAM_020780__ 1 TTGCAGATTAAAGAACAGCTGCGGCAGCTGAAACCGTATCAGCCGGGCAA 50
BSNT_03364___ 51 GCCGATTGAAGCAGTGAAATCAGAATA-TGGCTTGGATAAAGTTGTGAAG 99
.||.||.||||.|||||||...||||| .||||| ||.|||||.||.||.
RBAM_020780__ 51 ACCAATAGAAGAAGTGAAAATGGAATACGGGCTT-GAGAAAGTAGTAAAA 99
BSNT_03364___ 100 CTTGCTTCAAACGAGAATCCTTACGGCTGTTCAGAGGCTGCAAAAGAGGC 149
||.|||||.|||||.|||||.|.||||||||||.||||.||.|||||.||
RBAM_020780__ 100 CTCGCTTCTAACGAAAATCCGTTCGGCTGTTCACAGGCCGCTAAAGATGC 149
BSNT_03364___ 150 GCTTCATCATGAGATTCAACAGCTAGCCCTTTACCCGGACGGGTATAGCG 199
|||.|||||.||||||.|.|||||.||.||.||.||.|||||.||.||.|
RBAM_020780__ 150 GCTGCATCAGGAGATTGAGCAGCTTGCGCTGTATCCCGACGGTTACAGTG 199
BSNT_03364___ 200 CCGCTTTGCGGACAAGGCTCAGTAAGCACCTCAATGTCAGCGAAACATCA 249
||||||||.|.|||.||||||||.||||.||..|.|||||.|||.|.||.
RBAM_020780__ 200 CCGCTTTGAGAACACGGCTCAGTGAGCATCTGCAGGTCAGTGAATCTTCG 249
BSNT_03364___ 250 CTTATTTTCGGCAACGGTTCTGATGAAATCATTCAGATCATCTGCCGGGC 299
.|.||||||||||||||.||||||||..|..|.|||||.||||||||..|
RBAM_020780__ 250 ATCATTTTCGGCAACGGCTCTGATGAGCTTGTGCAGATTATCTGCCGTTC 299
BSNT_03364___ 300 ATTTCTAAACAATAAAACCAATACGATCACTGCTGCCCCGACTTTTCCGC 349
.||..||||..||.|..|.||.|||||.||.||.|||||||||||.||||
RBAM_020780__ 300 TTTATTAAATGATCAGGCAAACACGATTACCGCCGCCCCGACTTTCCCGC 349
BSNT_03364___ 350 AATATAAACATAATGCGGTTATTGAAGGTGCTGAAGTGCGTGAAATTGCA 399
||||.|.|||.||||||||.||||||||.|||||.|||||.||..||.|.
RBAM_020780__ 350 AATACAGACACAATGCGGTGATTGAAGGCGCTGAGGTGCGCGAGGTTCCG 399
BSNT_03364___ 400 CTTCGTCCCGACGGCTCACATGATTTAGACGCCATGTTAGAAGCCATCGA 449
||.||....||||||.|.||||||||.|||...|||.|.|||||.||.||
RBAM_020780__ 400 CTCCGCAGTGACGGCGCTCATGATTTGGACCGGATGCTGGAAGCAATTGA 449
BSNT_03364___ 450 CGAACAGACACAAGTCGTTTGGATATGCAGCCCGAATAATCCGACTGGCA 499
||...||||..||.||.|.|||.||||||.|||.|||||||||||.||.|
RBAM_020780__ 450 CGGCGAGACGAAAATCATATGGGTATGCAACCCCAATAATCCGACGGGGA 499
BSNT_03364___ 500 CTTATACATCTGA--AGGAG--AATTACTCGCATTTCTGGAGCGCGTTCC 545
|.|||||.||||| |.||| |||| ||.|||.|..|..|.|||||
RBAM_020780__ 500 CATATACTTCTGAGCAAGAGCTAATT----GCCTTTTTAAACAGAGTTCC 545
BSNT_03364___ 546 TTCACG----TGTCCTTGTTGTTCTTGACGAAGCATATTATGAATATGTA 591
|| |.|.||.|||||.|||||.|||||.||.||.||.|||||.
RBAM_020780__ 546 ----CGAGCATATACTCGTTGTACTTGATGAAGCGTACTACGAGTATGTT 591
BSNT_03364___ 592 ACAGCAGAGGATTACCCGGAAACCGTGCCGCTCTT-AAGCAAGTATTCCA 640
||.||.||.||||||||.||||.|.|.|||||.|| |||||| |||.|.|
RBAM_020780__ 592 ACGGCGGAAGATTACCCAGAAAGCATTCCGCTTTTAAAGCAA-TATCCGA 640
BSNT_03364___ 641 ATTTGATGATTTTGCGCACATTTTCAAAGGCATACGGTCTGGCAGCGCTC 690
||.|.|||||..|.|||||.||.||.||.||.|||||.||.||.|||||.
RBAM_020780__ 641 ATGTTATGATCCTCCGCACCTTCTCTAAAGCGTACGGACTTGCCGCGCTG 690
BSNT_03364___ 691 AGAGTCGGATACGGAATTGCTGACGAGAAC-CTGATTCGCCAGATTGAGC 739
.|.|||||||||||.|||||.||||| |.| |||||.|||||||||||.|
RBAM_020780__ 691 CGCGTCGGATACGGCATTGCGGACGA-AGCGCTGATCCGCCAGATTGAAC 739
BSNT_03364___ 740 CGGCGAGAGAGCCGTTTAATACGAGCCGTCTGGGCCAGGCTGCGGCGATT 789
||||||||||||||||.|||||||||.|..|.||.||||||.||||..|.
RBAM_020780__ 740 CGGCGAGAGAGCCGTTCAATACGAGCAGAATCGGTCAGGCTTCGGCACTG 789
BSNT_03364___ 790 GCCGCACTTGATGATCAAGCGTTTATTGCTTCC-----TGTGTCGAGCAA 834
||.||.||||||||.||..|.|||||| | ||.||||||.||
RBAM_020780__ 790 GCAGCGCTTGATGACCAGACATTTATT-----CAGGAATGCGTCGAGAAA 834
BSNT_03364___ 835 AATAATGCAGGCCTTCAGCAGTATTATGATTTTGCGAAAACTCATGGTTT 884
|||||.|||||||||.|||||||||||||||||||..|||||||.||.||
RBAM_020780__ 835 AATAAAGCAGGCCTTAAGCAGTATTATGATTTTGCAGAAACTCACGGATT 884
BSNT_03364___ 885 AAAGTGCTACCCTTCACAGACAAATTTTGTGTTAATTGACTTTAAACGTC 934
||..||.||.||||||||.||.||.||||||.|.|||||.|||||.||.|
RBAM_020780__ 885 AACTTGTTATCCTTCACAAACCAACTTTGTGCTCATTGATTTTAACCGCC 934
BSNT_03364___ 935 CTGCTGATGAACTGTTTCAGGCTCTGCTGGAAAAAGGCTATATCGTCCGG 984
|.||.|||||||||||.||.||.|||.||||||||||.|||||||||||.
RBAM_020780__ 935 CGGCGGATGAACTGTTCCAAGCCCTGTTGGAAAAAGGATATATCGTCCGC 984
BSNT_03364___ 985 TCAGGAAATGCATTAGGTTTCCCGACATCACTCCGGATTACGATCGGAAC 1034
||||||.|.||..|.||.||.||||||.|..|..||||||||.||||.||
RBAM_020780__ 985 TCAGGACAGGCGCTCGGATTTCCGACAGCGTTAAGGATTACGGTCGGTAC 1034
BSNT_03364___ 1035 AAAAGAGCAAAATGAAGAAATACTTGCCATTTTAGCTGAAATTTTATAA 1083
.||||||||.|||||.|||||.||..|.||||||||||||||.||||||
RBAM_020780__ 1035 GAAAGAGCAGAATGAGGAAATTCTCACAATTTTAGCTGAAATATTATAA 1083
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