Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03362 and RBAM_020760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:33
# Commandline: needle
# -asequence dna-align/BSNT_03362___aroE.1.9828.seq
# -bsequence dna-align/RBAM_020760___aroE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03362___aroE-RBAM_020760___aroE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03362___aroE-RBAM_020760___aroE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03362___aroE
# 2: RBAM_020760___aroE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1337
# Identity: 971/1337 (72.6%)
# Similarity: 971/1337 (72.6%)
# Gaps: 67/1337 ( 5.0%)
# Score: 3509.0
#
#
#=======================================
BSNT_03362___ 1 ATGAAACTTTTTATGCTGATTGAGGTGGAAAAAATGAAACGAGAAAAGGT 50
.|||||.|||||||.||
RBAM_020760__ 1 ---------------------------------TTGAAAAGAGAAAAAGT 17
BSNT_03362___ 51 GCAGGCCTTACATGGAGAAATACATATTCCCGGTGATAAATCCATTTCTC 100
|..|.|.|||.|.||.|||||.||||||||.||.|||||||||||.||.|
RBAM_020760__ 18 GACGTCTTTAAACGGTGAAATTCATATTCCGGGGGATAAATCCATCTCCC 67
BSNT_03362___ 101 ACCGCTCTGTTATGTTTGGCGCGCTAGCGGCAGGCACAACAACTGTTAAA 150
||||.|||||||||||.||.|||||.||||.|||.||.|||||.||.|||
RBAM_020760__ 68 ACCGTTCTGTTATGTTCGGAGCGCTTGCGGAAGGAACCACAACGGTAAAA 117
BSNT_03362___ 151 AACTTTCTGCCGGGAGCAGATTGTCTGAGCACGATCGATTGCTTTAGAAA 200
||||||.||||.|||||.||||||||||||||.||.|..|||||.|||||
RBAM_020760__ 118 AACTTTTTGCCCGGAGCCGATTGTCTGAGCACCATTGCCTGCTTCAGAAA 167
BSNT_03362___ 201 AATGGGTGT-TCACATTGAGCAAAGCGGCAGCGATGTCGTGATTCATGGA 249
||||||||| || ||||||.||||.|||.||.|||||...|||..|.||.
RBAM_020760__ 168 AATGGGTGTCTC-CATTGAACAAAACGGAAGTGATGTAACGATATACGGG 216
BSNT_03362___ 250 AAAGGAATCGATGCCCTGAAAGAGCCAGAAAGCCTTTTAGATGTCGGAAA 299
||.||.||.||.||.||....|||||.||.||||||.|.|||||||||||
RBAM_020760__ 217 AAGGGCATTGACGCACTTTGTGAGCCTGACAGCCTTCTTGATGTCGGAAA 266
BSNT_03362___ 300 TTCAGGTACAACGATTCGCCTGATGCTCGGAATATTGGCGGGCCGTCCTT 349
|||.||.||.||.||.||.|||||||||||.||.||.||.||.||.||.|
RBAM_020760__ 267 TTCCGGCACGACCATCCGTCTGATGCTCGGCATTTTAGCCGGACGCCCAT 316
BSNT_03362___ 350 TTTACAGCGCGGTAGCCGGAGATGAGAGCATTGCGAAGCGCCCAATGAAG 399
||.||||..|||||||.||.||.||.||.|||||.||||||||.||||||
RBAM_020760__ 317 TTCACAGTACGGTAGCGGGCGACGAAAGTATTGCAAAGCGCCCGATGAAG 366
BSNT_03362___ 400 CGTGTGACTGAGCCTTTGAAAAAAATGGGGGCTAAAATCGACGGCAGAGC 449
.|.|||||.||||||||.|||.|.|||||.||....||.|||||.|||||
RBAM_020760__ 367 AGGGTGACGGAGCCTTTAAAACAGATGGGAGCCGCGATTGACGGAAGAGC 416
BSNT_03362___ 450 CGGCGGAGAGTTTACACCGCTGTCAGTGAGCGGCGCTTCATTAAAAGGAA 499
.|.|||||..|||||.||..|.||.||.||.||||....|||.|||||.|
RBAM_020760__ 417 GGACGGAGGATTTACGCCTTTATCCGTAAGAGGCGGACAATTGAAAGGCA 466
BSNT_03362___ 500 TTGATTATGTATCACCTGTTGCAAGCGCGCAAATTAAATCTGCTGTTTTG 549
|||||||.||.||.|||||||||||||||||.||.|||||.||.||..||
RBAM_020760__ 467 TTGATTACGTCTCCCCTGTTGCAAGCGCGCAGATCAAATCCGCCGTGCTG 516
BSNT_03362___ 550 TTGGCCGGATTACAGGCTGAGGGCACAACAACTGTCACAGAGCCCCATAA 599
.|.||||||||.||||||||.||.||.||.||.|||||.|||||.|||||
RBAM_020760__ 517 CTTGCCGGATTGCAGGCTGAAGGGACGACGACCGTCACTGAGCCTCATAA 566
BSNT_03362___ 600 ATCTCGGGACCACACTGAGCGGATGCTTTCTGCTTTTGGCGTTAAGCTTT 649
|||..|.|||||.||.||.||||||||....||||||||||...|||||.
RBAM_020760__ 567 ATCAAGAGACCATACGGAACGGATGCTGAACGCTTTTGGCGCCGAGCTTG 616
BSNT_03362___ 650 CTGAAGATCAAACGAGTGTTTCCATTGCTGGTGGCCAGAAACT-----GA 694
|.|||....|.|||||.|.||||.|..|.||.||.|||||.|| ||
RBAM_020760__ 617 CGGAAACGGAGACGAGCGCTTCCGTAACGGGCGGTCAGAAGCTCCGGGGA 666
BSNT_03362___ 695 CAGCTGCTGATATTTTTGTTCCTGGAGACATTTCTTCAGCCGCGTTTTTC 744
|||||||||||.||.||.||.||.|||||||||||.||.||||||
RBAM_020760__ 667 -----GCTGATATTTTCGTGCCCGGCGATATTTCTTCAGCGGCCTTTTTC 711
BSNT_03362___ 745 CTTGCTGCTGGCGCGATGGTTCCAAACAGCAGAATTGTATTGAAAAACGT 794
||.||.||.|||||..|.|||||....|||.|.|||||..||||||||||
RBAM_020760__ 712 CTCGCGGCAGGCGCTGTCGTTCCCGGAAGCCGGATTGTGCTGAAAAACGT 761
BSNT_03362___ 795 AGGTTTAAATCCGACTCGGACAGGTATTATTGACGTCCTTCAAA--ACAT 842
.||..|.||.|||||.||.||.||.||.|||||.||| |.||| |.||
RBAM_020760__ 762 CGGCCTGAACCCGACACGCACGGGAATGATTGATGTC--TTAAAGCAAAT 809
BSNT_03362___ 843 GGGGGCAAAACTTGAAATCAAACCATC---TGCTGATAGCGGTGCAGAGC 889
||||||...|||||||.|.|..||.|| .||.||.||| |||||||
RBAM_020760__ 810 GGGGGCTTCACTTGAAGTGATTCCTTCAGAAGCGGACAGC---GCAGAGC 856
BSNT_03362___ 890 CTTATGGAGATTTGATTATAGAAACGTCATCTCTAAAAGCAGTTGAAATC 939
||||.|||||..||.||||.|||||.|||.||||.|||||.|..||||||
RBAM_020760__ 857 CTTACGGAGACCTGGTTATTGAAACCTCAGCTCTGAAAGCGGCAGAAATC 906
BSNT_03362___ 940 GGAGGAGATATCATTCCGCGTTTAATTGATGAGATCCCTATCATCGCGCT 989
||.|||||.||||||||.|||||||||||.||||||||.||.|||||.||
RBAM_020760__ 907 GGCGGAGAAATCATTCCCCGTTTAATTGACGAGATCCCGATTATCGCCCT 956
BSNT_03362___ 990 TCTTGCGACTCAGGCGGAAGGAACTACCGTTATTAAGGACGCGGCAGAGC 1039
|.|.||.||.|||||.|||||.||.||.||.|||||.|||||.||.||||
RBAM_020760__ 957 TTTGGCAACGCAGGCTGAAGGCACAACTGTCATTAAAGACGCTGCGGAGC 1006
BSNT_03362___ 1040 TAAAAGTGAAAGAAACAAACCGTATTGATACTGTTGTTTCTGAGCTTCGC 1089
|.||.|||||.|||||.|||||.||.||.||.||.||.||.|||||.||.
RBAM_020760__ 1007 TGAAGGTGAAGGAAACGAACCGGATCGACACCGTCGTATCAGAGCTCCGG 1056
BSNT_03362___ 1090 AAGCTGGGTGCTGAAATTGAACCGACAGCAGATGGAATGAAGGTTTATGG 1139
||..|.||.||.||.|||||||||||.|.|||.||.|||||..|..|.||
RBAM_020760__ 1057 AAAATCGGCGCAGACATTGAACCGACTGAAGACGGCATGAAAATACACGG 1106
BSNT_03362___ 1140 TAAACAAACG-TTGAAAGGCGGCGCGGCAGTGTCCAGCCACGGAGATCAT 1188
.|||.||||| ||| ..|||||.||.|..|||||.||||||||.||.||.
RBAM_020760__ 1107 CAAAAAAACGCTTG-CGGGCGGAGCCGATGTGTCAAGCCACGGTGACCAC 1155
BSNT_03362___ 1189 CGAATCGGAATGATGCTTGGTATTGCTTCCTGTATAACGGAGGAGCCGAT 1238
||.|||||.||||||||||||.|.|||||.||..|.||.||.||||||||
RBAM_020760__ 1156 CGCATCGGCATGATGCTTGGTGTCGCTTCATGCCTGACAGAAGAGCCGAT 1205
BSNT_03362___ 1239 TGAAAT-CGAGCACACGGATGCCATTCACGTTTCTTATCCAACCTTCTTC 1287
|||.|| ||.| |.||.||.||.||.||.||.||.|||||.||.||.||.
RBAM_020760__ 1206 TGACATCCGTG-ATACTGAGGCAATCCATGTCTCATATCCGACATTTTTT 1254
BSNT_03362___ 1288 GAGCATTTA----AATAAGCTTTCGAAAAAATCCTGA 1320
||||||||| |||.|| |.||||||.|||||
RBAM_020760__ 1255 GAGCATTTAGATCAATTAG----CCAAAAAAGCCTGA 1287
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