Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03314 and RBAM_020400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:29
# Commandline: needle
# -asequence dna-align/BSNT_03314___yppG.1.9828.seq
# -bsequence dna-align/RBAM_020400___yppG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03314___yppG-RBAM_020400___yppG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03314___yppG-RBAM_020400___yppG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03314___yppG
# 2: RBAM_020400___yppG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 457
# Identity: 270/457 (59.1%)
# Similarity: 270/457 (59.1%)
# Gaps: 101/457 (22.1%)
# Score: 708.5
#
#
#=======================================
BSNT_03314___ 1 ATG-AACGG------GAGC--TCTCGAAGCTAT---CC-----TCGGCAA 33
||| ||.|| |||| |.|| ||..||| || .||||
RBAM_020400__ 1 ATGCAATGGAGAGCAGAGCCATATC-AAAATATGTACCAGCAGCCGGC-- 47
BSNT_03314___ 34 ATGGGCTATTATTATCCTCAGCATATGCAAGGATATTATCAGCAG----- 78
|||.||||..||.||.|||||.||.|| |..|||| ||||||
RBAM_020400__ 48 --GGGATATTTCTACCCGCAGCAGATACA--GCCATTA-CAGCAGCCGTA 92
BSNT_03314___ 79 ---GCTGCA-------CCCGGTTATTTAGAGCAACAACTGCC---TCAGC 115
||.||| || ||| |||.||.|.||| |||.|
RBAM_020400__ 93 TCCGCAGCAGATACAGCC-----ATT----GCAGCAGCCGCCATATCATC 133
BSNT_03314___ 116 AGCA---------------------TTAT-GGACAGCAGGATTA-----T 138
|||| |||| .|| |.|||||.|| .
RBAM_020400__ 134 AGCAAGGGCAGTACCCGCAGCAATTTTATCCGA-ATCAGGAATACGGTCA 182
BSNT_03314___ 139 TAT-CAGCC----TTATGCTCCGATC-----------CAGCCTATGCCTA 172
||| ||||| || |||||| .|| |||.| |||||..
RBAM_020400__ 183 TATGCAGCCGCCGTT-TGCTCC-CTCTCCTCCTCAGGCAGGC-ATGCCCG 229
BSNT_03314___ 173 TGCAGCCGCCTGTATTTTCTAACCCTTATCCTATCCCAAGGCCTAATCAA 222
.|..||.|||.|..|||...||.|||||.||..|.||.||.||.|||||.
RBAM_020400__ 230 GGGGGCAGCCGGGGTTTGTGAATCCTTACCCCGTTCCCAGACCGAATCAG 279
BSNT_03314___ 223 CAGCAGCCTTCACAATT-TCAAAGCATTATGTCGCAGTTCAAAAAAGCCA 271
||||||.||||.||||| || |.||||..|.||.|||||.||||||.|.|
RBAM_020400__ 280 CAGCAGTCTTCCCAATTCTC-AGGCATACTCTCCCAGTTTAAAAAAACGA 328
BSNT_03314___ 272 ATGGGCAATTTGATTTTAATAAAATGATGGATACGACAGGTCAAGTAATG 321
|.||.||.|||||.||||||||||||||.|||||.||.||.||..|..|.
RBAM_020400__ 329 ACGGACAGTTTGACTTTAATAAAATGATAGATACAACGGGGCAGATGGTA 378
BSNT_03314___ 322 AGTGCAATGAATCAGGTCGGATCTTTAATAAAGGGATTTACCAGCTTTTT 371
||.||..|.||||||||||||||..|..|.||.||.||.|||||..|.||
RBAM_020400__ 379 AGCGCCGTAAATCAGGTCGGATCGCTGGTGAAAGGCTTCACCAGTATCTT 428
BSNT_03314___ 372 TAAATGA 378
.||||.|
RBAM_020400__ 429 CAAATAA 435
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