Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03309 and RBAM_020370
See
Amino acid alignment /
Visit
BSNT_03309 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:29
# Commandline: needle
# -asequence dna-align/BSNT_03309___yprA.1.9828.seq
# -bsequence dna-align/RBAM_020370___yprA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03309___yprA-RBAM_020370___yprA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03309___yprA-RBAM_020370___yprA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03309___yprA
# 2: RBAM_020370___yprA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2274
# Identity: 1722/2274 (75.7%)
# Similarity: 1722/2274 (75.7%)
# Gaps: 51/2274 ( 2.2%)
# Score: 6400.0
#
#
#=======================================
BSNT_03309___ 1 ATGAAAAAGAAATCACTGACTGAACTCATTTCTGATTTAAAAGGAA--AT 48
|||||.||.||||||||||..|||||.|||...||.|||||| || ||
RBAM_020370__ 1 ATGAAGAAAAAATCACTGAGCGAACTGATTCAGGAATTAAAA--AATCAT 48
BSNT_03309___ 49 GAAAACGTTGTGAATTGGCATGAAATTGAGCCTCGGGAAGCAAAAACAAG 98
|||||..|||||.|||||||||||...||.||.|||||.||.|||||.|.
RBAM_020370__ 49 GAAAATATTGTGCATTGGCATGAAGAGGAACCGCGGGAGGCGAAAACCAT 98
BSNT_03309___ 99 GCCTATGCCCGA--AAGTATAGACGAGAGAATCAAAGCGGCCCTTTCGAA 146
|||.|||||.|| |||||.|..||| |.|.|| ..|||| ||.|||||
RBAM_020370__ 99 GCCGATGCCGGAGCAAGTAGATCCGA-ACATTC-GGGCGG--CTCTCGAA 144
BSNT_03309___ 147 A--AGGGGCATTGATGAACTATATACTCACCAATATTCCGCTTTTCAATA 194
| |||||.||.||....||.|.|||.||.|||||.|||||||||||...
RBAM_020370__ 145 AAGAGGGGGATCGAGCGGCTCTTTACACATCAATACTCCGCTTTTCAGAC 194
BSNT_03309___ 195 TGTGCAAAAAGGAGAAAGCATTGTTACCGTAACGCCAACAGCATCAGGAA 244
.||.|||||.||||||||||||||..|.||.||.||.||.||.||.||||
RBAM_020370__ 195 GGTTCAAAACGGAGAAAGCATTGTGGCTGTCACACCGACGGCCTCCGGAA 244
BSNT_03309___ 245 AAACGTTATGCTACAACCTCCCAGTCCTGCAGTCCATCGCCCAAGATGAA 294
||||..|.|||||.||.||.||.||.||.|||||.|||||..||||||..
RBAM_020370__ 245 AAACACTGTGCTATAATCTTCCGGTTCTTCAGTCTATCGCGGAAGATGCC 294
BSNT_03309___ 295 ACAAACCGGGCGTTATATTTATTTCCGACTAAAGCGCTGGCACAAGACCA 344
.|||.|||.|||.|.||||||||||||||.||.|||||.||.||.||.||
RBAM_020370__ 295 TCAAGCCGCGCGCTTTATTTATTTCCGACAAAGGCGCTCGCGCAGGATCA 344
BSNT_03309___ 345 AAAGAGCGAGCTAAATGAAATTATTGATGAAATGGGCATTGATATTAAAA 394
|||.||||||||.||.|||||.||.||.||.|.||||||.||.|||||||
RBAM_020370__ 345 AAAAAGCGAGCTGAACGAAATCATAGACGAGACGGGCATGGACATTAAAA 394
BSNT_03309___ 395 GCTTTACATATGATGGGGATACGTCTCCGGCAATCAGACAAAAGGTGAGA 444
||||.||.|||||.||.||||||||||||||.|||||.||.||.||.|||
RBAM_020370__ 395 GCTTCACCTATGACGGAGATACGTCTCCGGCCATCAGGCAGAAAGTCAGA 444
BSNT_03309___ 445 AAAGCAGGTCATATTGTCATTACAAACCCCGATATGCTGCATTCTGCCAT 494
|||||.||.||||||||.||.|||||.|||||||||||.|||||.||.||
RBAM_020370__ 445 AAAGCCGGGCATATTGTGATCACAAATCCCGATATGCTTCATTCAGCTAT 494
BSNT_03309___ 495 TCTACCGCATCATACGAAATGGGTCAGTTTGTTTGAAAACCTTAAGTATA 544
|||.||.||.|||||.||||||||.|||.|||||||||||||.||.||||
RBAM_020370__ 495 TCTTCCCCACCATACAAAATGGGTGAGTCTGTTTGAAAACCTGAAATATA 544
BSNT_03309___ 545 TCGTCATCGATGAGCTTCATACGTATCGAGGTGTGTTCGGCAGCCATGTG 594
|||||||.|||||..|.||||||||.||.||.||.|||||||||||||||
RBAM_020370__ 545 TCGTCATTGATGAATTACATACGTACCGCGGCGTATTCGGCAGCCATGTG 594
BSNT_03309___ 595 GCAAATGTGATCCGGCGGCTAAAGCGGATCTGCCGGTTTTATGGAAGTGA 644
||.||.||.|||||.||..|||.|.|.||||||...|||||.||||||..
RBAM_020370__ 595 GCGAACGTCATCCGCCGTTTAATGAGAATCTGCGCTTTTTACGGAAGTAC 644
BSNT_03309___ 645 TCCGGTTTTTATTTGTACTTCCGCAACAATTGCCAACCCAAAGGAATTGG 694
.|||...|||||.|||||.|||||.|||||.|||||.||.|.||||||||
RBAM_020370__ 645 GCCGTCATTTATCTGTACATCCGCCACAATCGCCAATCCGAGGGAATTGG 694
BSNT_03309___ 695 GAGAGCAGCTGACAGGCAAACCGATGCGGCTGGTCGATGACAACGGCGCA 744
..|||||||||||.||.|||.|..||||.|||.|.||.||.||||||||.
RBAM_020370__ 695 CGGAGCAGCTGACGGGAAAATCAGTGCGCCTGATTGACGATAACGGCGCC 744
BSNT_03309___ 745 CCGAGCGGACGCAAGCATTTTGTGTTTTACAATCCGCCAATTGTGAACAA 794
|||..||||.|.|||||.||||..|||||||||||.||.|||||.||.||
RBAM_020370__ 745 CCGGCCGGAAGAAAGCACTTTGCTTTTTACAATCCTCCGATTGTAAATAA 794
BSNT_03309___ 795 ACCGCTCAATATTAGAAGGAGCGCAACCGCAGAAGTGAATGAACTGGCGA 844
||||||..|||||.|||..|||||.||||..||||||||.|||||.||.|
RBAM_020370__ 795 ACCGCTGCATATTCGAAAAAGCGCCACCGTGGAAGTGAACGAACTTGCCA 844
BSNT_03309___ 845 AAGAGTTCCTTAAAAACAAAG-TGCAGACCATTGTTTTTGCCAGAAGCAG 893
|| |.||..|||||||..||| |.|||||.||||||||||||||||||.|
RBAM_020370__ 845 AA-ACTTTTTTAAAAAATAAGATCCAGACGATTGTTTTTGCCAGAAGCCG 893
BSNT_03309___ 894 AGTTCGGGTGGAAATTATTTTAAGCCATATTCAGGAGCTTGTGAAAAAAG 943
.||.|||||.|||||||||||||||||.|||||||||.|.||.|||||||
RBAM_020370__ 894 TGTCCGGGTTGAAATTATTTTAAGCCACATTCAGGAGATCGTAAAAAAAG 943
BSNT_03309___ 944 AGATTGGAACAAAATCAATCAGAGGCTATCGGGGAGGCTATCTGCCGAAA 993
|.||.||..|.||.||..|||||||||||||.||.||.|||||.||||||
RBAM_020370__ 944 AAATCGGGTCGAAGTCTGTCAGAGGCTATCGCGGCGGATATCTTCCGAAA 993
BSNT_03309___ 994 GAGCGAAGAGAAATCGAAAGAGGCCTGAGAGAAGGCGACATTTTAGGAGT 1043
||..||||||||||.||..|.||..|.|||||.||...||||.|.||.||
RBAM_020370__ 994 GAAAGAAGAGAAATAGAGCGGGGGTTAAGAGACGGAAGCATTCTCGGCGT 1043
BSNT_03309___ 1044 GGTCAGTACGAATGCCTTAGAGCTTGGTGTTGATATCGGCCAGCTGCAAG 1093
.|||||.||.||.||..|.|||||.||.|||||||||||||||||.||.|
RBAM_020370__ 1044 TGTCAGCACAAACGCGCTGGAGCTCGGCGTTGATATCGGCCAGCTTCAGG 1093
BSNT_03309___ 1094 TGTGTGTAATGACTGGGTATCCCGGAAGTGTTGCAAGTGCTTGGCAGCAG 1143
|.||.||.|||||.|||||.||.||.|||||.||.||.||.|||||||||
RBAM_020370__ 1094 TCTGCGTGATGACGGGGTACCCGGGCAGTGTCGCGAGCGCATGGCAGCAG 1143
BSNT_03309___ 1144 GCCGGACGAGCCGGCAGAAGACACGGTGA-------ATCTTTGATTATTT 1186
||.||.||.|||||..|..|.||.||.|| ||| .|||
RBAM_020370__ 1144 GCGGGCCGGGCCGGGCGGCGGCAGGGAGAGGCGCTTATC-GTGA------ 1186
BSNT_03309___ 1187 TGGTAGCCAATTCAACACCGATTGACCAATATATTGTGCGGCATCCTGAA 1236
||||.||.||.||....||||||||||||||||||||.||.||||||||.
RBAM_020370__ 1187 TGGTGGCGAACTCTGATCCGATTGACCAATATATTGTCCGCCATCCTGAT 1236
BSNT_03309___ 1237 TATTTCTTTAATCGTTCGCCGGAATCTGCAAGAATCAATCCGGAGAATTT 1286
|||||||||||.||.|||||.|||||||||||.||.|||||.||.|||.|
RBAM_020370__ 1237 TATTTCTTTAAACGCTCGCCTGAATCTGCAAGGATTAATCCTGATAATCT 1286
BSNT_03309___ 1287 GATTATTTTAGTAGACCACTTAAAGTGTGCGGCTTATGAGCTTCCTTTTA 1336
.|||||.||.||.||.|||.|.||.||.||.||.||||||||.|||||.|
RBAM_020370__ 1287 CATTATATTGGTCGATCACCTGAAATGCGCCGCGTATGAGCTGCCTTTCA 1336
BSNT_03309___ 1337 GAGCTGATGAAGAATTTGGAGCCATGGAAGTCAGTGATATTCTTGAGTAT 1386
||||.||||||..|||.||||..|..||.|..||.||.|||||.||||||
RBAM_020370__ 1337 GAGCCGATGAAACATTCGGAGAAAATGATGCAAGAGACATTCTCGAGTAT 1386
BSNT_03309___ 1387 CTTCAGGAAGAGGCTGTTCTTCACCGCAACGGCGAACGGTACCATTGGGC 1436
.|..|.|||||.|..||.||||||...|||.|||||||.||.||.|||||
RBAM_020370__ 1387 TTAGAAGAAGAAGGGGTGCTTCACGAAAACCGCGAACGCTATCACTGGGC 1436
BSNT_03309___ 1437 AAGTGAGTCGTTTCCTGCTTCAAACATCAGTTTGCGTTCCGCCTCCCAGG 1486
|||.||.||.|||||.||.||.|||||||||.|.|||||.||.||.||||
RBAM_020370__ 1437 AAGCGAATCTTTTCCCGCCTCCAACATCAGTCTCCGTTCGGCGTCACAGG 1486
BSNT_03309___ 1487 AAAATGTCGTTATAGTTGATCAGTCGGATATTGCAAATGTAAGGATTATC 1536
||||.||.||.||.|||||.|.|||.||.|..||..||||||..||.|||
RBAM_020370__ 1487 AAAACGTGGTCATCGTTGACCGGTCAGAGACGGCTGATGTAAAAATCATC 1536
BSNT_03309___ 1537 GGTGAAATGGACCGTTTTAGTGCGATGACGCTTTTACATGATGAAGCAAT 1586
||.|||||||||||.||.||.||||||||||||.|.|||||||||||.||
RBAM_020370__ 1537 GGAGAAATGGACCGCTTCAGCGCGATGACGCTTCTTCATGATGAAGCGAT 1586
BSNT_03309___ 1587 TTATTTGCATGAAGGCGTTCAGTATCAAGTTGAGAAGCTCGATTGGGACC 1636
||||.|.||||||||.||.|||||.||.|||||.|||||.||||||||||
RBAM_020370__ 1587 TTATCTTCATGAAGGGGTGCAGTACCAGGTTGAAAAGCTTGATTGGGACC 1636
BSNT_03309___ 1637 ATAAAAAGGCGTATGTCAGAAAAGTCGATGTCGAATATTATACGGATGCA 1686
|||||||.|||||.||..||||.||||||||||||||||||||.|||||.
RBAM_020370__ 1637 ATAAAAAAGCGTACGTGCGAAAGGTCGATGTCGAATATTATACAGATGCC 1686
BSNT_03309___ 1687 AACCTGGCAGTTCAGCTGAAGGTATTAGAAATCGATAAAAC--------G 1728
||..|.||.||.||||||||.||..|.||.||.||.|.||| |
RBAM_020370__ 1687 AATTTAGCGGTGCAGCTGAAAGTGCTGGACATTGACAGAACGGACAGCAG 1736
BSNT_03309___ 1729 AAAGAAAAAAGCCGTACGTCATTGCACTACGGAGACGTCACTGTCAATGC 1778
||||||||.|||| ||.||.|.|||.||.||.||.||.||.||
RBAM_020370__ 1737 AAAGAAAACAGCC--------TTACATTTCGGCGATGTAACCGTGAACGC 1778
BSNT_03309___ 1779 CCTGCCGACCATTTTTAAAAAAATAAAAATGACCACTTTTGAAAATATTG 1828
.||.|||||.||.|||||||||||.||||||||.||.|||||||||||.|
RBAM_020370__ 1779 ACTTCCGACAATATTTAAAAAAATTAAAATGACGACATTTGAAAATATAG 1828
BSNT_03309___ 1829 GGTCTGGACCTATTCATTTGCCGGAAGAAGAACTGCATACAAGTGCAGCT 1878
|.||.||.||.||||||.|.||.|||||||||||||||||.|||||.||.
RBAM_020370__ 1829 GATCAGGGCCGATTCATCTTCCAGAAGAAGAACTGCATACCAGTGCTGCC 1878
BSNT_03309___ 1879 TGGCTCGAAATCAAAACAG-CGGATGAAGACATCGGGGAAAAGACACTGG 1927
|||||.| |||..|||.|| |||||...||.|||||.|||||.||.||.|
RBAM_020370__ 1879 TGGCTTG-AATTGAAAGAGACGGATTCGGAGATCGGCGAAAAAACGCTTG 1927
BSNT_03309___ 1928 AACAGCTGCTTCTTGGCATCTCGAATGTGCTGCAGCATATTGTCCCTGTG 1977
|||||||||||.|.|||||..|..|.||.|||||||||||.||.|||||.
RBAM_020370__ 1928 AACAGCTGCTTTTAGGCATTGCCCACGTCCTGCAGCATATCGTGCCTGTA 1977
BSNT_03309___ 1978 TATATCATGTGTGATCGAAATGATGTTCATGTTGTTTCTCAAATTAAAGC 2027
||..|||||||.||.||||||||.||.|||||.||..|.|||||.|||||
RBAM_020370__ 1978 TACGTCATGTGCGACCGAAATGACGTGCATGTCGTGCCGCAAATCAAAGC 2027
BSNT_03309___ 2028 AGCCCATACCGGATTGCCAACCATATTTTTATATGATCATTATCCGGGCG 2077
.||.|||||||||.|.||.||.||.|||.|.|||||||||||||||||||
RBAM_020370__ 2028 CGCACATACCGGACTTCCGACAATCTTTCTGTATGATCATTATCCGGGCG 2077
BSNT_03309___ 2078 GTATCGGTTTGGCGGAGGAAGTCTTTAAACGTTTTTCAGACATTAATGAA 2127
|.|||||..|.||.||.|||||.|.|||.||.|||...||.||.||||||
RBAM_020370__ 2078 GAATCGGACTTGCCGATGAAGTATATAAGCGATTTGATGAAATCAATGAA 2127
BSNT_03309___ 2128 GCGGCGAAACAACTGATTACACATTGTCCTTGTCATGACGGCTGTCCGTC 2177
|.|||..|.|..|||||.|.|||.|||||.|||||.|||||.|||||.||
RBAM_020370__ 2128 GGGGCTGAGCGCCTGATCAGACAATGTCCATGTCAAGACGGATGTCCTTC 2177
BSNT_03309___ 2178 TTGTATAGGTACAGAAATAGAAGGGATAAAAGCAAAGGAAAG-AATTTTG 2226
.||.||.||..|.|||||||||||.|||.|.||||| ||||| .||..|.
RBAM_020370__ 2178 CTGCATCGGCTCCGAAATAGAAGGAATAGATGCAAA-GAAAGCGATACTC 2226
BSNT_03309___ 2227 CAGCTGTTGGATCAAATGTCGTAA 2250
|.|||.|||.||.|..| ||||
RBAM_020370__ 2227 CGGCTCTTGAATTACGT---GTAA 2247
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.