Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03269 and RBAM_020060
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:25
# Commandline: needle
# -asequence dna-align/BSNT_03269___ugtP.1.9828.seq
# -bsequence dna-align/RBAM_020060___ugtP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03269___ugtP-RBAM_020060___ugtP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03269___ugtP-RBAM_020060___ugtP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03269___ugtP
# 2: RBAM_020060___ugtP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1157
# Identity: 922/1157 (79.7%)
# Similarity: 922/1157 (79.7%)
# Gaps: 22/1157 ( 1.9%)
# Score: 3652.0
#
#
#=======================================
BSNT_03269___ 1 TTGAATACCAATAAAAGAGTATTAATTTTGACTGCAAATTACGGAAATGG 50
||||||||||||||||.||||||||||||||||||||||||||||||.||
RBAM_020060__ 1 TTGAATACCAATAAAAAAGTATTAATTTTGACTGCAAATTACGGAAACGG 50
BSNT_03269___ 51 ACATGTGCAGGTAGCCAAAACACTTTATGAACAATGTGTACGGCTCGGCT 100
.|||||.||.||.||||||||.||.||.|||||.|||.|.||.|||||||
RBAM_020060__ 51 GCATGTTCAAGTGGCCAAAACGCTCTACGAACAGTGTCTGCGTCTCGGCT 100
BSNT_03269___ 101 TTCAGCATGTAACAGTTTCTAATTTGTACCAAGAGTCAAATCCGATTGTT 150
| || ||||.||.|||||.||||||||.|||||||||||||||||||||
RBAM_020060__ 101 T--AG-ATGTGACGGTTTCCAATTTGTATCAAGAGTCAAATCCGATTGTT 147
BSNT_03269___ 151 TCAGAGGTAACTCAATACCTTTATTTAAAAAGCTTCTCAATCGGGAAACA 200
||||||||.|||||||||||||||||||||||||||||||||||||||||
RBAM_020060__ 148 TCAGAGGTTACTCAATACCTTTATTTAAAAAGCTTCTCAATCGGGAAACA 197
BSNT_03269___ 201 GTTTTATCGTTTGTTTTATTACGGAGTTGACAAAATCTATAATAAACGTA 250
||||||||||||||||||||||||||||||||||||||||||||||||.|
RBAM_020060__ 198 GTTTTATCGTTTGTTTTATTACGGAGTTGACAAAATCTATAATAAACGCA 247
BSNT_03269___ 251 AATTCAATATTTACTTTAAAATGGGTAATAAAAGATTGGGCGAACTTGTC 300
|||||||||||||.|||||||||||.||||||.|.||.|||.|.||.||.
RBAM_020060__ 248 AATTCAATATTTATTTTAAAATGGGAAATAAACGTTTAGGCCAGCTCGTT 297
BSNT_03269___ 301 GATGAACATCAGCCCGATATTATTATTAATACATTTCCGATGATCGTCGT 350
||.||.|||.||||.||.||||||||.|||||||||||||||||.|||||
RBAM_020060__ 298 GAAGAGCATAAGCCGGACATTATTATCAATACATTTCCGATGATTGTCGT 347
BSNT_03269___ 351 GCCGGAATACAGACGCCGAACTGGAAGAGTCATTCCTACCTTCAACGTTA 400
.||||||||||||||..||||.||||.|||.||.||.||.||||||||||
RBAM_020060__ 348 ACCGGAATACAGACGGAGAACCGGAAAAGTGATCCCGACGTTCAACGTTA 397
BSNT_03269___ 401 TGACTGATTTTTGTCTTCATAAAATTTGGGTTCACGAAAACGTGGATAAA 450
||||.|||||.||.|||||.|||||.||||||||.|||||.||.||||||
RBAM_020060__ 398 TGACCGATTTCTGCCTTCACAAAATCTGGGTTCATGAAAATGTTGATAAA 447
BSNT_03269___ 451 TATTATGTGGCGACAGATTACGTGAAGGAAAAACTGCTGGAGATCGGCAC 500
||||||||.||.||||||||||||||||||||||||.|.||.||||||||
RBAM_020060__ 448 TATTATGTCGCCACAGATTACGTGAAGGAAAAACTGATTGAAATCGGCAC 497
BSNT_03269___ 501 TCATCCAAGCAATGTAAAAATCACAGGAATTCCAATCAGGCCGCAATTTG 550
|||.||.|.|||.|||||.|||||.||.|||||.|||||.||.|||||.|
RBAM_020060__ 498 TCACCCGAACAACGTAAAGATCACGGGCATTCCCATCAGACCTCAATTCG 547
BSNT_03269___ 551 AAGAATCCATGCCGGTTGGCCCGATATATAAAAAGTACAATCTTTCACCA 600
|.|||||.||||||...|..|||||.||||||||.||||||||.||.||.
RBAM_020060__ 548 AGGAATCGATGCCGAAAGAGCCGATTTATAAAAAATACAATCTCTCTCCC 597
BSNT_03269___ 601 AACAAAAAAGTGCTTCTGATCATGGCAGGTGCCCACGGTGTATTAAAGAA 650
.||||||||||.|||||.||.|||||.||.||.||.|||||..|.||.||
RBAM_020060__ 598 GACAAAAAAGTTCTTCTTATTATGGCGGGAGCGCATGGTGTGCTGAAAAA 647
BSNT_03269___ 651 CGTAAAAGAGCTGTGCGAAAACCTTGTCAAGGATGACCAAGTGCAAGTGG 700
|||||||||.|||||||||||.||.||..|.||.||.||.|||||.||.|
RBAM_020060__ 648 CGTAAAAGAACTGTGCGAAAATCTCGTTCATGACGATCAGGTGCAGGTTG 697
BSNT_03269___ 701 TTGTCGTGTGCGGGAAAAATACGGCT--TTAAAAGAATCTTTGAGTGC-G 747
|.||.||.|||||.|||| ||.||| .|.||||||||..|.| || |
RBAM_020060__ 698 TGGTGGTATGCGGCAAAA--ACAGCTCGCTGAAAGAATCCCTCA--GCAG 743
BSNT_03269___ 748 CTT-GAGGCGGAAAATGGTGACAAATTAAAAGTTCTGGGCTATGTGGAGC 796
||| ||.|..||.||||..|||....|.|||||||||||||||||.||..
RBAM_020060__ 744 CTTAGAAGGTGACAATGCCGACCGGCTGAAAGTTCTGGGCTATGTAGAAA 793
BSNT_03269___ 797 GCATTGATGAGCTATTTCGGATCACAGATTGCATGATTACCAAGCCCGGC 846
|.|||||.|||||.||.||.||.||.||.||||||||.||.||.||.|||
RBAM_020060__ 794 GAATTGACGAGCTGTTCCGTATTACGGACTGCATGATCACGAAACCGGGC 843
BSNT_03269___ 847 GGCATTACTTTGACAGAAGCCACAGCCATTGGAGTGCCTGTCATTCTGTA 896
|||||.||..||||.|||||.||.||.||.|||||.||.||.|||.||||
RBAM_020060__ 844 GGCATCACACTGACGGAAGCGACGGCGATCGGAGTACCCGTTATTTTGTA 893
BSNT_03269___ 897 CAAACCCGTGCCTGGCCAGGAAAAAGAAAATGCAAACTTCTTTGAAGACC 946
||||||.||.||.||.||||||||||||||.||.|..|||||||||||.|
RBAM_020060__ 894 CAAACCGGTTCCCGGGCAGGAAAAAGAAAACGCCATTTTCTTTGAAGATC 943
BSNT_03269___ 947 GCGGAGCTGCCATCGTTGTGAACCGTCATGAAGAGATTCTCGAATCAGTC 996
||||.||.||..||||.||.|||||.||.|||||.|||.|.||.||.|||
RBAM_020060__ 944 GCGGTGCGGCTGTCGTGGTCAACCGCCACGAAGAAATTTTAGAGTCTGTC 993
BSNT_03269___ 997 ACTTCCCTTCTTGCAGATGAAGATACCTTGCATCGCATGAAGAAAAACAT 1046
||.|||||||||||.|||||.||.|...||.|.||.||||||.|.||.||
RBAM_020060__ 994 ACCTCCCTTCTTGCGGATGAGGAGAAGCTGAACCGGATGAAGGACAATAT 1043
BSNT_03269___ 1047 TAAGGACCTTCATTTAGCAAACTCCTCTGAAGTGATTTTAGAGGATATCC 1096
|||...||||||..|..|.|||||.|||||.||.|||||..||||.||..
RBAM_020060__ 1044 TAAAAGCCTTCACCTCCCCAACTCTTCTGAGGTCATTTTGCAGGACATTA 1093
BSNT_03269___ 1097 TGAAGGAATCAGAAATGATGACTGCCAAACAAAAAGCC--AAAGTGC--T 1142
|.||.|||||.|||||||||.| |...|||.| |.|..|| |
RBAM_020060__ 1094 TAAAAGAATCTGAAATGATGGC-------CGGGAAGGCGGATATGGCATT 1136
BSNT_03269___ 1143 ATCGTAA 1149
|||||||
RBAM_020060__ 1137 ATCGTAA 1143
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