Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03257 and RBAM_020000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:22
# Commandline: needle
# -asequence dna-align/BSNT_03257___yphP.1.9828.seq
# -bsequence dna-align/RBAM_020000___yphP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03257___yphP-RBAM_020000___yphP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03257___yphP-RBAM_020000___yphP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03257___yphP
# 2: RBAM_020000___yphP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 435
# Identity: 358/435 (82.3%)
# Similarity: 358/435 (82.3%)
# Gaps: 0/435 ( 0.0%)
# Score: 1482.0
#
#
#=======================================
BSNT_03257___ 1 ATGTCAATGGCTTATGAAGAATACATGCGCCAGCTTGTCGTACCGATGCG 50
|||||||||||||||||||||||.|||||.|||||.|||||.||||||||
RBAM_020000__ 1 ATGTCAATGGCTTATGAAGAATATATGCGACAGCTGGTCGTGCCGATGCG 50
BSNT_03257___ 51 CCGCGAGCTGACTGGAGCAGGTTTTGAAGAGTTAACAACAGCGGAAGAAG 100
|||.||||||||.||.||.||||||.|.||.|||||.||.||.|||||||
RBAM_020000__ 51 CCGTGAGCTGACGGGTGCGGGTTTTCAGGAATTAACGACTGCTGAAGAAG 100
BSNT_03257___ 101 TAGAAAACTTTATGGAAAAGGCAGAGGGCACAACTCTTGTAGTCGTTAAC 150
||||||.||||||||||.|||||||||||||.||..|.||.||.||.|||
RBAM_020000__ 101 TAGAAAGCTTTATGGAACAGGCAGAGGGCACGACATTGGTCGTTGTCAAC 150
BSNT_03257___ 151 TCTGTATGCGGCTGTGCGGCAGGCCTTGCGCGTCCTGCGGCTACACAGGC 200
||.||.|||||||||||.||.||.|||||.|||||.||.||.||.|||||
RBAM_020000__ 151 TCCGTGTGCGGCTGTGCAGCCGGTCTTGCCCGTCCGGCTGCGACTCAGGC 200
BSNT_03257___ 201 AGTCCTCCAGAATGACAAAACACCTGACAATACGGTGACTGTTTTTGCGG 250
.||..|.|||.||||.|||.|.|||||..|||||||.||.||.|||||.|
RBAM_020000__ 201 TGTTTTACAGCATGAAAAAGCGCCTGATCATACGGTTACCGTATTTGCCG 250
BSNT_03257___ 251 GCCAAGATAAAGAAGCTACTGCGAAAATGCGTGAGTATTTTACTGGCCAG 300
|.|||||||||||.||.||.||.|||||||||||.||||||||.||.|||
RBAM_020000__ 251 GTCAAGATAAAGACGCAACGGCAAAAATGCGTGAATATTTTACGGGGCAG 300
BSNT_03257___ 301 GAGCCTTCTTCACCATCAATGGCTCTTTTGAAAGGCAAAGAAGTCGTACA 350
||.|||||.||.||.||||||||.||.||.|||||.|||||.|||||.||
RBAM_020000__ 301 GAACCTTCCTCGCCTTCAATGGCGCTGTTAAAAGGGAAAGAGGTCGTTCA 350
BSNT_03257___ 351 TTTTATTCCGCGTCATGAAATTGAAGGACACGATATGGAAGAAATTATGA 400
|||||||||.||.||.|||||.|||||.||.||.|||||.||||||||||
RBAM_020000__ 351 TTTTATTCCCCGCCACGAAATCGAAGGGCATGACATGGAGGAAATTATGA 400
BSNT_03257___ 401 GAAATCTGACTGCTGCCTTCGATGCGCACTGCTAA 435
.|||||||||.|.||||||||||||||||||||.|
RBAM_020000__ 401 AAAATCTGACGGATGCCTTCGATGCGCACTGCTGA 435
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