Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03234 and RBAM_019850
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:21
# Commandline: needle
# -asequence dna-align/BSNT_03234___msrB.1.9828.seq
# -bsequence dna-align/RBAM_019850___msrB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03234___msrB-RBAM_019850___msrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03234___msrB-RBAM_019850___msrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03234___msrB
# 2: RBAM_019850___msrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 436
# Identity: 355/436 (81.4%)
# Similarity: 355/436 (81.4%)
# Gaps: 2/436 ( 0.5%)
# Score: 1439.0
#
#
#=======================================
BSNT_03234___ 1 ATGGCGTACAATAAAGAAGAAAAAATAAAGTCATTAAATCGCATGCAATA 50
|||||.|..|||||||||||||||||.||.||||||||.|||||||||||
RBAM_019850__ 1 ATGGCTTTTAATAAAGAAGAAAAAATCAAATCATTAAACCGCATGCAATA 50
BSNT_03234___ 51 TGAAGTAACGCAAAATAACGGCACGGAGCCGCCATTTCAAAATGAATATT 100
||||||.||.|||||||||||.|||||||||||.|||||||||||||..|
RBAM_019850__ 51 TGAAGTCACACAAAATAACGGAACGGAGCCGCCGTTTCAAAATGAATTCT 100
BSNT_03234___ 101 GGGATCATAAGGAAGAAGGGTTGTATGTAGACATTGTGTCAGGCAAGCCA 150
|||||||.||.|||||.|||.|||||||.||.||.||.||.||.|||||.
RBAM_019850__ 101 GGGATCACAAAGAAGAGGGGCTGTATGTTGATATCGTATCGGGAAAGCCC 150
BSNT_03234___ 151 TTGTTTACATCCAAGGATAAATTTGATTCCCACTGCGGCTGGCCAAGCTT 200
||||||||.||...|||||||||.|||||.||.|||||||||||.||.||
RBAM_019850__ 151 TTGTTTACTTCTCTGGATAAATTCGATTCTCATTGCGGCTGGCCCAGTTT 200
BSNT_03234___ 201 TACAAAGCCGATTGAAGAGGAAGAAGTGGAAGAAAAACTGGACACGAGCC 250
||||||.||||||||.||.|||||.||.||.||||||||||||||.||||
RBAM_019850__ 201 TACAAAACCGATTGAGGAAGAAGAGGTTGACGAAAAACTGGACACAAGCC 250
BSNT_03234___ 251 ACGGCATGATTCGCACAGAAGTAAGAAGCCGAACTGCTGATTCTCATCTT 300
||||.|||||.||.||.|||||.||||||..|||.||||||||.|| |||
RBAM_019850__ 251 ACGGGATGATCCGGACGGAAGTGAGAAGCAAAACAGCTGATTCCCA-CTT 299
BSNT_03234___ 301 -GGCCACGTATTTAATGACGGACCTGGTCCAAACGGACTTCGTTACTGCA 349
||||||||||||||||||||.||.||.||||.|||.||.|||||.||||
RBAM_019850__ 300 AGGCCACGTATTTAATGACGGTCCGGGGCCAAGCGGTCTCCGTTATTGCA 349
BSNT_03234___ 350 TAAATTCAGCAGCGCTGCGGTTTGTTCCGAAGCATAAGCTAAAAGAAGAA 399
|.||.||.||.||.||.||||||.|||||||..|.|||||.||.|||||.
RBAM_019850__ 350 TTAACTCTGCGGCACTCCGGTTTATTCCGAAAGACAAGCTGAAGGAAGAG 399
BSNT_03234___ 400 GGATACGAAAGCTATCTGCATCTCTTTAATAAATAA 435
||.||.|||..||..||||||.|.|||.|.|||||.
RBAM_019850__ 400 GGCTATGAAGCCTGCCTGCATTTATTTGAAAAATAG 435
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