Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03211 and RBAM_019500
See
Amino acid alignment /
Visit
BSNT_03211 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:16
# Commandline: needle
# -asequence dna-align/BSNT_03211___yozE.1.9828.seq
# -bsequence dna-align/RBAM_019500___yozE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03211___yozE-RBAM_019500___yozE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03211___yozE-RBAM_019500___yozE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03211___yozE
# 2: RBAM_019500___yozE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity: 179/229 (78.2%)
# Similarity: 179/229 (78.2%)
# Gaps: 8/229 ( 3.5%)
# Score: 696.0
#
#
#=======================================
BSNT_03211___ 1 ATGAAATCCTTTTATCACTATTTATTGAAATACAGACACCCTAAGCCGAA 50
|||||||||||||||||||||||..||||||||||.||.||.||||||.|
RBAM_019500__ 1 ATGAAATCCTTTTATCACTATTTGATGAAATACAGGCATCCCAAGCCGCA 50
BSNT_03211___ 51 GGACAGC-ATCAGTGAATTTGCCAATCAGGCGTATGAGGATCACAGCTTT 99
|||| || |||||..|.|||||.||||||||.||.||.||||||.|||||
RBAM_019500__ 51 GGAC-GCAATCAGCCAGTTTGCGAATCAGGCATACGAAGATCACGGCTTT 99
BSNT_03211___ 100 CCAAAAACATCTACCGATTATCATGAAATCAGTTCATATTTGGAGCTGAA 149
||.|||||.||.|.|||||||||.||..|||||||.|||||.||.||||.
RBAM_019500__ 100 CCGAAAACGTCAAGCGATTATCACGAGCTCAGTTCTTATTTAGAACTGAG 149
BSNT_03211___ 150 TGCTGATTACCTTCACACGATGGCGACGTTTGATGAAGCTTGGGATCAAT 199
.||.||.||..|..|.|||||||||||.|||||||||||||||||..|||
RBAM_019500__ 150 CGCCGACTATTTAGAAACGATGGCGACATTTGATGAAGCTTGGGAAAAAT 199
BSNT_03211___ 200 ACGAGTCTGAAGTG---CACGGCAGATAA 225
|.|||.|.||.||| ||||.|.||
RBAM_019500__ 200 ATGAGACCGAGGTGCATCACGCCTGA--- 225
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.