Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03209 and RBAM_019480

See Amino acid alignment / Visit BSNT_03209 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:15
# Commandline: needle
#    -asequence dna-align/BSNT_03209___yodN.1.9828.seq
#    -bsequence dna-align/RBAM_019480___yodN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03209___yodN-RBAM_019480___yodN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03209___yodN-RBAM_019480___yodN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03209___yodN
# 2: RBAM_019480___yodN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 687
# Identity:     563/687 (82.0%)
# Similarity:   563/687 (82.0%)
# Gaps:          12/687 ( 1.7%)
# Score: 2323.0
# 
#
#=======================================

BSNT_03209___      1 ATGAAGCAAAATAAACCGAAATTCCAAGTAGGGGATATCGTAGTCGTCAT     50
                     |||||||.|.|||||||||||||.|||||.||.||.|||||.||||||.|
RBAM_019480__      1 ATGAAGCCAGATAAACCGAAATTTCAAGTGGGAGACATCGTGGTCGTCGT     50

BSNT_03209___     51 TATGTATGGAACAGTCGGCACCATCACAAAAGTACACCAAATTGATAAAC    100
                     .|||||.|||||.|||||||||||.||.||.||.||.|||||||||||||
RBAM_019480__     51 GATGTACGGAACCGTCGGCACCATTACGAAGGTTCATCAAATTGATAAAC    100

BSNT_03209___    101 ACTATCTTTATGAAGTCAATCATAACGAAGT--TTTATACTTTGAATCAT    148
                     |.||||||||.||||||||||||||.|||||  |||||  ||||||||.|
RBAM_019480__    101 ATTATCTTTACGAAGTCAATCATAATGAAGTGCTTTAT--TTTGAATCGT    148

BSNT_03209___    149 CTATTCAGCTTTATAAAGATTATGAGGGTGTCATTGTCGACATGGAGAAG    198
                     |.||.|||||||||||||||||||||||.||.||.|||||.|||||.||.
RBAM_019480__    149 CCATCCAGCTTTATAAAGATTATGAGGGCGTGATCGTCGATATGGAAAAA    198

BSNT_03209___    199 CTTGATATTGAGTATGAATTCCTTATTGGGGACGTTGTTTATGTAAAAGA    248
                     .|.||||||||.||||||||.||.||.||.|||||.||.||||||||.||
RBAM_019480__    199 TTGGATATTGAATATGAATTTCTGATCGGCGACGTCGTATATGTAAAGGA    248

BSNT_03209___    249 TTATGGAAAAGAACTCTTTCGCATTATCGGCCATAGAACAGAAATTTGGA    298
                     .||.|||||.|||.|.||.||..|.||||||||.|||||.|||||.||||
RBAM_019480__    249 CTACGGAAAGGAATTATTCCGTGTCATCGGCCACAGAACTGAAATATGGA    298

BSNT_03209___    299 GATATTTAGAAGATGGCTGGGAAGATATCATTTATGAGCTGACCCGTTTA    348
                     ||||||||||.|||||||||||.|||||.||||||||||||||.||..|.
RBAM_019480__    299 GATATTTAGAGGATGGCTGGGAGGATATTATTTATGAGCTGACTCGGCTG    348

BSNT_03209___    349 AAGGATGGAGAGTGGCTTGAAACGGAGGAAGAGGATCTCACGCTGGTGCT    398
                     ||.||.|||||||||||||||||||||||||||||||||||||||||.||
RBAM_019480__    349 AAAGACGGAGAGTGGCTTGAAACGGAGGAAGAGGATCTCACGCTGGTTCT    398

BSNT_03209___    399 TAGAAAATATGAAATGGACCAGTTTGTGCATCAGCTGTTGTTTGTCCATT    448
                     .|||||||||||||||||.||||||||||||||||||.||||||||||.|
RBAM_019480__    399 GAGAAAATATGAAATGGATCAGTTTGTGCATCAGCTGCTGTTTGTCCACT    448

BSNT_03209___    449 ATGTCGGAGAAACTGGC----CATGAGATCGGCGAAGATATCGCATCGTC    494
                     ||||.||.|||    ||    ||||||||||||||.||||.||...||||
RBAM_019480__    449 ATGTTGGGGAA----GCATCTCATGAGATCGGCGAGGATACCGTCGCGTC    494

BSNT_03209___    495 TGCTCTTCTTCAGTTTGAAGGCGATGATGAAGATCAAGATACCCTTCACA    544
                     ||||||||||||||||||||||||||.|||.||||..|||.||||.||..
RBAM_019480__    495 TGCTCTTCTTCAGTTTGAAGGCGATGCTGATGATCCCGATGCCCTGCATG    544

BSNT_03209___    545 TCCTTGCTGTGTCAATTGTTGATGAGCTTCTGGATATTTATAATGACTAC    594
                     |.||.||.||.||.|||||.||||||||.||.|||||||||||.||.||.
RBAM_019480__    545 TGCTGGCGGTATCGATTGTAGATGAGCTGCTTGATATTTATAACGATTAT    594

BSNT_03209___    595 AAAATTCTGTACGAAATGTTTCATGATGAAGAATATAAAGACATGATGAT    644
                     ||.|||||.||..|..||||...|||.||||||||||||||.|||||||.
RBAM_019480__    595 AAGATTCTTTATCATTTGTTCGGTGACGAAGAATATAAAGATATGATGAA    644

BSNT_03209___    645 GTTTGTTTTGGAAAGTTTAAAAGAGCATTTCAGTTAG    681
                     .|||||..|||||||..|....|||||||||||.|||
RBAM_019480__    645 TTTTGTGCTGGAAAGCCTGCGGGAGCATTTCAGCTAG    681


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