Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03209 and RBAM_019480
See
Amino acid alignment /
Visit
BSNT_03209 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:15
# Commandline: needle
# -asequence dna-align/BSNT_03209___yodN.1.9828.seq
# -bsequence dna-align/RBAM_019480___yodN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03209___yodN-RBAM_019480___yodN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03209___yodN-RBAM_019480___yodN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03209___yodN
# 2: RBAM_019480___yodN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 687
# Identity: 563/687 (82.0%)
# Similarity: 563/687 (82.0%)
# Gaps: 12/687 ( 1.7%)
# Score: 2323.0
#
#
#=======================================
BSNT_03209___ 1 ATGAAGCAAAATAAACCGAAATTCCAAGTAGGGGATATCGTAGTCGTCAT 50
|||||||.|.|||||||||||||.|||||.||.||.|||||.||||||.|
RBAM_019480__ 1 ATGAAGCCAGATAAACCGAAATTTCAAGTGGGAGACATCGTGGTCGTCGT 50
BSNT_03209___ 51 TATGTATGGAACAGTCGGCACCATCACAAAAGTACACCAAATTGATAAAC 100
.|||||.|||||.|||||||||||.||.||.||.||.|||||||||||||
RBAM_019480__ 51 GATGTACGGAACCGTCGGCACCATTACGAAGGTTCATCAAATTGATAAAC 100
BSNT_03209___ 101 ACTATCTTTATGAAGTCAATCATAACGAAGT--TTTATACTTTGAATCAT 148
|.||||||||.||||||||||||||.||||| ||||| ||||||||.|
RBAM_019480__ 101 ATTATCTTTACGAAGTCAATCATAATGAAGTGCTTTAT--TTTGAATCGT 148
BSNT_03209___ 149 CTATTCAGCTTTATAAAGATTATGAGGGTGTCATTGTCGACATGGAGAAG 198
|.||.|||||||||||||||||||||||.||.||.|||||.|||||.||.
RBAM_019480__ 149 CCATCCAGCTTTATAAAGATTATGAGGGCGTGATCGTCGATATGGAAAAA 198
BSNT_03209___ 199 CTTGATATTGAGTATGAATTCCTTATTGGGGACGTTGTTTATGTAAAAGA 248
.|.||||||||.||||||||.||.||.||.|||||.||.||||||||.||
RBAM_019480__ 199 TTGGATATTGAATATGAATTTCTGATCGGCGACGTCGTATATGTAAAGGA 248
BSNT_03209___ 249 TTATGGAAAAGAACTCTTTCGCATTATCGGCCATAGAACAGAAATTTGGA 298
.||.|||||.|||.|.||.||..|.||||||||.|||||.|||||.||||
RBAM_019480__ 249 CTACGGAAAGGAATTATTCCGTGTCATCGGCCACAGAACTGAAATATGGA 298
BSNT_03209___ 299 GATATTTAGAAGATGGCTGGGAAGATATCATTTATGAGCTGACCCGTTTA 348
||||||||||.|||||||||||.|||||.||||||||||||||.||..|.
RBAM_019480__ 299 GATATTTAGAGGATGGCTGGGAGGATATTATTTATGAGCTGACTCGGCTG 348
BSNT_03209___ 349 AAGGATGGAGAGTGGCTTGAAACGGAGGAAGAGGATCTCACGCTGGTGCT 398
||.||.|||||||||||||||||||||||||||||||||||||||||.||
RBAM_019480__ 349 AAAGACGGAGAGTGGCTTGAAACGGAGGAAGAGGATCTCACGCTGGTTCT 398
BSNT_03209___ 399 TAGAAAATATGAAATGGACCAGTTTGTGCATCAGCTGTTGTTTGTCCATT 448
.|||||||||||||||||.||||||||||||||||||.||||||||||.|
RBAM_019480__ 399 GAGAAAATATGAAATGGATCAGTTTGTGCATCAGCTGCTGTTTGTCCACT 448
BSNT_03209___ 449 ATGTCGGAGAAACTGGC----CATGAGATCGGCGAAGATATCGCATCGTC 494
||||.||.||| || ||||||||||||||.||||.||...||||
RBAM_019480__ 449 ATGTTGGGGAA----GCATCTCATGAGATCGGCGAGGATACCGTCGCGTC 494
BSNT_03209___ 495 TGCTCTTCTTCAGTTTGAAGGCGATGATGAAGATCAAGATACCCTTCACA 544
||||||||||||||||||||||||||.|||.||||..|||.||||.||..
RBAM_019480__ 495 TGCTCTTCTTCAGTTTGAAGGCGATGCTGATGATCCCGATGCCCTGCATG 544
BSNT_03209___ 545 TCCTTGCTGTGTCAATTGTTGATGAGCTTCTGGATATTTATAATGACTAC 594
|.||.||.||.||.|||||.||||||||.||.|||||||||||.||.||.
RBAM_019480__ 545 TGCTGGCGGTATCGATTGTAGATGAGCTGCTTGATATTTATAACGATTAT 594
BSNT_03209___ 595 AAAATTCTGTACGAAATGTTTCATGATGAAGAATATAAAGACATGATGAT 644
||.|||||.||..|..||||...|||.||||||||||||||.|||||||.
RBAM_019480__ 595 AAGATTCTTTATCATTTGTTCGGTGACGAAGAATATAAAGATATGATGAA 644
BSNT_03209___ 645 GTTTGTTTTGGAAAGTTTAAAAGAGCATTTCAGTTAG 681
.|||||..|||||||..|....|||||||||||.|||
RBAM_019480__ 645 TTTTGTGCTGGAAAGCCTGCGGGAGCATTTCAGCTAG 681
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.