Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03202 and RBAM_019430

See Amino acid alignment / Visit BSNT_03202 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:13
# Commandline: needle
#    -asequence dna-align/BSNT_03202.1.9828.seq
#    -bsequence dna-align/RBAM_019430.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03202-RBAM_019430.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03202-RBAM_019430.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03202
# 2: RBAM_019430
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 126
# Identity:     101/126 (80.2%)
# Similarity:   101/126 (80.2%)
# Gaps:           0/126 ( 0.0%)
# Score: 405.0
# 
#
#=======================================

BSNT_03202         1 ATGGGTAAAAAACATCGCAACCGGATCACCGGCCAAAAAAAGAACAATCA     50
                     |||||.||||||||.|||||||||.|.||||||||.||||||||||||||
RBAM_019430        1 ATGGGCAAAAAACAGCGCAACCGGGTAACCGGCCAGAAAAAGAACAATCA     50

BSNT_03202        51 TATACCTGAAAAAGATATCATTGCAGCTGAAGAAGCACACGGGAAAGAAT    100
                     ..|.||.|....|||..|||||||||||||.|||||.||.||.|||||..
RBAM_019430       51 CGTGCCCGTTTCAGACGTCATTGCAGCTGATGAAGCGCATGGAAAAGAGC    100

BSNT_03202       101 ATTCTGCTGCCAAACGCAAGCCTTAA    126
                     ||||.||.||.|||||.|||||||||
RBAM_019430      101 ATTCCGCCGCTAAACGGAAGCCTTAA    126


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