Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06148 and RBAM_019360
See
Amino acid alignment /
Visit
BSNT_06148 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:37
# Commandline: needle
# -asequence dna-align/BSNT_06148___bglA.1.9828.seq
# -bsequence dna-align/RBAM_019360___bglA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06148___bglA-RBAM_019360___bglA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06148___bglA-RBAM_019360___bglA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06148___bglA
# 2: RBAM_019360___bglA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1458
# Identity: 1121/1458 (76.9%)
# Similarity: 1121/1458 (76.9%)
# Gaps: 33/1458 ( 2.3%)
# Score: 4201.5
#
#
#=======================================
BSNT_06148___ 1 ATGGGAAACA-TGCCGAAGGATTTTTTATGGGGCGGTGCTTTAGCTGCCC 49
||||| .||| ||||.||.||||||||||||||.||.|||.|.||.||||
RBAM_019360__ 1 ATGGG-GACATTGCCAAAAGATTTTTTATGGGGAGGCGCTCTGGCCGCCC 49
BSNT_06148___ 50 ACCAATTTGAAGGCGGATGGAATCAAGGCGGTAAAGGGCCGAGTGTCGTC 99
|||||||||||||.|||||||||.|||||||.||.|||||||||||.||.
RBAM_019360__ 50 ACCAATTTGAAGGGGGATGGAATAAAGGCGGCAAGGGGCCGAGTGTAGTG 99
BSNT_06148___ 100 GATGTGATGACAGCGGGTGCGCACGGCGTGCCGAGAAAAATCACGGATAC 149
||.||.|||||.||.||.|||||.||.|||||..|.|||||.||.|||||
RBAM_019360__ 100 GACGTCATGACGGCAGGCGCGCATGGTGTGCCCCGGAAAATAACAGATAC 149
BSNT_06148___ 150 GATTGAAGAAAACGAATTTTATCCAAACCATGAAGCCATTGATTTCTATC 199
.||||||||....|||||||||||.||.||||||||.||||||||.||||
RBAM_019360__ 150 AATTGAAGAGCGGGAATTTTATCCGAATCATGAAGCGATTGATTTTTATC 199
BSNT_06148___ 200 ACAGATACAAGGAAGATATCGCTTTGTT-TGCGGAAATGGGATTAAAATG 248
|..|.||.||.||.||.|||||.||.|| .|| ||..||||..|.|||||
RBAM_019360__ 200 ATCGTTATAAAGAGGACATCGCATTATTCAGC-GAGCTGGGTCTGAAATG 248
BSNT_06148___ 249 CCTGCGGACGTCCATCGGCTGGAGCCGGATTTTTCCGAAAGGCGATGAGG 298
..|..|.||||||||||||||||||.|.||||||||.|||||.|||||.|
RBAM_019360__ 249 TTTAAGAACGTCCATCGGCTGGAGCAGAATTTTTCCTAAAGGTGATGAAG 298
BSNT_06148___ 299 CTGAACCGAACGAAGCTGGTTTGCAGTTTTATGATGATGTGTTTGATGAA 348
|.||.||.||.||.|..||.|||...|||||.||....||||||||||||
RBAM_019360__ 299 CCGAGCCCAATGAGGAAGGATTGGCTTTTTACGACCGGGTGTTTGATGAA 348
BSNT_06148___ 349 TTGCTGAAGCATGGGATCGAGCCGGTCATTACCCTGTCTCACTTTGAAAT 398
||||||||.||||||||.||.|||||.||.||.|||||.||.|||||.||
RBAM_019360__ 349 TTGCTGAAACATGGGATTGAACCGGTAATCACGCTGTCACATTTTGAGAT 398
BSNT_06148___ 399 GCCGCTGCACCTGGCAAGAGAATATGGCGGCTTCAGAAACCGGAA---AG 445
|||||||||..||||.||||||||.|||||.|||||||||.|.|| ||
RBAM_019360__ 399 GCCGCTGCATTTGGCGAGAGAATACGGCGGTTTCAGAAACAGAAAAACAG 448
BSNT_06148___ 446 TCGTGGACTTCTTCGTCAACTTTGCAGATGCTTGCTTTACCCGTTACAAA 495
|| ||| ||.||.||.||.||.||.||.|..||.|||...||.||.|||
RBAM_019360__ 449 TC--GGA-TTTTTTGTAAAATTCGCTGAAGTGTGTTTTGAACGCTATAAA 495
BSNT_06148___ 496 GAGAAAGTGAAGTACTGGATGACATTTAACGAGATCAACAACCAAATGGA 545
.|.||.||||||||.||||||||.||||||||.|||||.||..|.|||||
RBAM_019360__ 496 CATAAGGTGAAGTATTGGATGACGTTTAACGAAATCAATAATAAGATGGA 545
BSNT_06148___ 546 TGTGAACAATCCGTTGTTCCTATGGACGAATTCAGGTGTTGTGGTTGGCG 595
||||||.||||||.|.||..||||||||||.||.||.||.|..||....|
RBAM_019360__ 546 TGTGAATAATCCGATCTTTTTATGGACGAACTCGGGCGTCGCCGTCAAAG 595
BSNT_06148___ 596 AAAACGAAAACGCCAAGGAGGTCATGTATCA-AACGGCACACCACGAACT 644
|||||||||||||.||.||.||||||||||| ..|||| ||.||||||||
RBAM_019360__ 596 AAAACGAAAACGCAAAAGAAGTCATGTATCAGGCCGGC-CATCACGAACT 644
BSNT_06148___ 645 AGTGGCGAGCGCATTAGCAGTGGCAAAAGGAAAAGACATCAATCCAGAGT 694
..||||.||||||||.||.||..|.||.||||.||||||||||||.||||
RBAM_019360__ 645 GCTGGCAAGCGCATTGGCTGTTTCGAAGGGAAGAGACATCAATCCTGAGT 694
BSNT_06148___ 695 TCCAGATCGGGGCCATGGTATCACACGTGCCGATTTATCCTTTCTCCTCC 744
||..||||||.||.|||||||||||.||.||||||||.||.|.|||.||.
RBAM_019360__ 695 TCAGGATCGGCGCGATGGTATCACATGTTCCGATTTACCCGTACTCATCT 744
BSNT_06148___ 745 AATCCTAAAGATGTGATGCTGGCTGAAGAAGAAATGAGGCAGCGCTATTT 794
.|.||..|.|||||||||||||||||||||...|||||.||.||.|.|||
RBAM_019360__ 745 CACCCCGACGATGTGATGCTGGCTGAAGAAACGATGAGACAACGTTTTTT 794
BSNT_06148___ 795 CTTCCCTGATGTGCAGGTGCGCGGTTATTATCCAAGCTACGCGTTGAAGG 844
||||||.||.||||||||.|||||.||||||||||||||.|||||.||.|
RBAM_019360__ 795 CTTCCCGGACGTGCAGGTTCGCGGATATTATCCAAGCTATGCGTTAAAAG 844
BSNT_06148___ 845 AATTTGAACGCGAAGGCTACAACATCACA-TTCGAAGACGGCGATGATGA 893
|.||||||.|.||||||||..|.|| ||| ||.||||||||.|||||.||
RBAM_019360__ 845 AGTTTGAAAGAGAAGGCTATCAGAT-ACACTTTGAAGACGGTGATGAAGA 893
BSNT_06148___ 894 GATTTTAAGAAACGGAACC--GTCGATTACTTAGGCTTCAGCTATTACAT 941
||||||.|.|||||| || ||.||.|||.|.||.||||||||||||||
RBAM_019360__ 894 GATTTTGAAAAACGG--CCGAGTGGACTACCTCGGATTCAGCTATTACAT 941
BSNT_06148___ 942 GTCAACAACTGTGAAAAGCGATGTGAAAAATGATAACACTGACGATATTG 991
|||.|||||.||.|||||.|||||...|||.|||||.||.|..|||.|.|
RBAM_019360__ 942 GTCTACAACCGTAAAAAGTGATGTATCAAACGATAATACCGGGGATGTCG 991
BSNT_06148___ 992 TAAATGGCGGCTTGCCGAATGGTGTCGAAAATCCGTACATCACTTCGAGT 1041
||||.||.||.|||||.||.||.||.||||||||.||.||.||..|||||
RBAM_019360__ 992 TAAACGGAGGATTGCCAAACGGCGTGGAAAATCCTTATATTACAGCGAGT 1041
BSNT_06148___ 1042 GACTGGGGATGGGCGATTGATCCAACCGGGCTGAGATATACGTTAAATCG 1091
||.|||||.|||||||||||.||.|||||..|..|.||.||.|||||.||
RBAM_019360__ 1042 GATTGGGGCTGGGCGATTGACCCGACCGGTTTACGGTACACATTAAACCG 1091
BSNT_06148___ 1092 TTTTTATGACCGATACCAAATCCCGTTATTCATCGTTGAAAATGGCTTTG 1141
.||.||.|||||.|||||.||.||.|||||.|||||.|||||.||.||.|
RBAM_019360__ 1092 CTTATACGACCGCTACCAGATTCCATTATTTATCGTGGAAAACGGATTCG 1141
BSNT_06148___ 1142 GCGCAGTGGATACGCTGGAGGAGGACGG--CAAGGTTCATGA----TCCG 1185
||||..|.||.||..|.||.|||||||| ||| ||||||| ||..
RBAM_019360__ 1142 GCGCCATCGACACATTAGAAGAGGACGGTTCAA--TTCATGACACTTCAA 1189
BSNT_06148___ 1186 GAGCGCATTCAATATTTAAAATCGCATATTGAAGCATTGAAAAAAGCGGT 1235
|| |||.||||||||...||.|||||..||||.|||||||||||..|
RBAM_019360__ 1190 GA----ATTGAATATTTATCGTCACATATAAAAGCTTTGAAAAAAGCAAT 1235
BSNT_06148___ 1236 CACGTACGATGGTGTTGATTTAATTGGCTACACGCCGTGGGGCATTATTG 1285
|||.||.||||||||.|||.||||.|||||.||.||.|||||.|||||||
RBAM_019360__ 1236 CACATATGATGGTGTGGATGTAATGGGCTATACACCATGGGGAATTATTG 1285
BSNT_06148___ 1286 ATATTGTCTCCTTCACAACTGGCGAAATGAAAAAACGCTACGGCATGATC 1335
||||.||.||.||.|||||.||.||||||||||||||||||||||||||.
RBAM_019360__ 1286 ATATCGTGTCATTTACAACCGGAGAAATGAAAAAACGCTACGGCATGATT 1335
BSNT_06148___ 1336 TATGTTGATCGTGACAATGAAGGAAACGGATCCATGAAACGATATAAGAA 1385
|||||||||||.||.||||||||.|||||.||.||||..||...||||||
RBAM_019360__ 1336 TATGTTGATCGGGATAATGAAGGCAACGGTTCAATGAGGCGGCTTAAGAA 1385
BSNT_06148___ 1386 AGACTCCTTTGAGTGGTACAAAAATGTCATTCAAACGAACGGC---GAGG 1432
||||||.|||||.|||||.|||||.||.|||.||||.|||||| .|.|
RBAM_019360__ 1386 AGACTCATTTGAATGGTATAAAAAAGTGATTGAAACAAACGGCTCATATG 1435
BSNT_06148___ 1433 AACTATAA 1440
.|...|||
RBAM_019360__ 1436 TATCCTAA 1443
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.