Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03167 and RBAM_019220
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:03
# Commandline: needle
# -asequence dna-align/BSNT_03167.1.9828.seq
# -bsequence dna-align/RBAM_019220___yojG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03167-RBAM_019220___yojG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03167-RBAM_019220___yojG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03167
# 2: RBAM_019220___yojG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 669
# Identity: 546/669 (81.6%)
# Similarity: 546/669 (81.6%)
# Gaps: 6/669 ( 0.9%)
# Score: 2202.0
#
#
#=======================================
BSNT_03167 1 ATGAAAGAACATGTACTAGTAATCCTGCCTCACCCTGATGATGAATCATA 50
|||||||||||||||||.||.|||||||||||||||||||||||||||||
RBAM_019220__ 1 ATGAAAGAACATGTACTCGTCATCCTGCCTCACCCTGATGATGAATCATA 50
BSNT_03167 51 TGGAGTGGCAGGCCTCATTGCCTTAAACAGAAAAAAAGACATTCCCGTTA 100
.|||||||||||.||.|||||.|||.|||||.|||||||.||||||||||
RBAM_019220__ 51 CGGAGTGGCAGGGCTGATTGCTTTACACAGACAAAAAGATATTCCCGTTA 100
BSNT_03167 101 CGTATGCCTGCGCCACTTTAGGTGAAATGGGCAGAAATATGGGCGATCCA 150
|||||||.|||||.||..|.||.|||||||||.|.||.|||||.|||||.
RBAM_019220__ 101 CGTATGCATGCGCAACGCTTGGCGAAATGGGCCGGAACATGGGAGATCCT 150
BSNT_03167 151 TTTTTCGCGAATCGGGAAACGTTGCCGCTGCTAAGAAAACAAGAGCTCAT 200
|||||||||||.||.|||||..||||||||.||||||||||||||||.||
RBAM_019220__ 151 TTTTTCGCGAACCGTGAAACACTGCCGCTGTTAAGAAAACAAGAGCTGAT 200
BSNT_03167 201 CAATGCTTGCAAAGAAATGGATATCAATGACCTTCGTATGCTTGGACTCC 250
|.|.||.|||||||.||||||..|.|.||||||..|.|||||.||.||.|
RBAM_019220__ 201 CGACGCATGCAAAGCAATGGACGTTACTGACCTGAGAATGCTCGGGCTTC 250
BSNT_03167 251 GTGACAAAACGCTCGAATTTGAAGACGATGAGTATTTAGCTGATATCATG 300
||||.|||||.||.|||||||||||.||.||||...|.||.|||||.|||
RBAM_019220__ 251 GTGATAAAACACTTGAATTTGAAGATGACGAGTGGCTCGCGGATATGATG 300
BSNT_03167 301 GAAGAGATCATAGATGATGTAAAACCAAGTTTAATTGTCACATTTTATCC 350
||||||||.||.||.|||||||||||.|||.|.|||||||||||.|| ||
RBAM_019220__ 301 GAAGAGATTATCGACGATGTAAAACCGAGTCTGATTGTCACATTCTA-CC 349
BSNT_03167 351 CGGA-CACGGTGTGCACCCTGACCATGATGCATGCGGGGAAGCGGTTATC 399
|||| |||||.||.||.||.||.||||||||||||||.||||||||||||
RBAM_019220__ 350 CGGAGCACGGCGTCCATCCGGATCATGATGCATGCGGCGAAGCGGTTATC 399
BSNT_03167 400 CGTGCATTATATCGCAAAAAGAAAGAAGACCGTCCGCGTACAATCTGCAT 449
.|.||..|.||..|.||.||.|||||.|||||.|||||.||..|.|||||
RBAM_019220__ 400 AGAGCGCTTTACAGAAAGAAAAAAGAGGACCGCCCGCGCACGCTTTGCAT 449
BSNT_03167 450 GGCCATTACCCGCAACAGAGAAGAGGTTCTCGGCGAAG-CTGATGTCGTG 498
|||.||.|||||||||||.||.||.|...||||| ||| ||||||||.|.
RBAM_019220__ 450 GGCAATCACCCGCAACAGGGAGGAAGCCGTCGGC-AAGCCTGATGTCATT 498
BSNT_03167 499 CTTGATATCAAAGAAGTAGCTGATATTAAAATGAATGCGTTAAGAGCTCA 548
||||||||.|||||.||.||.|||||||||||||||||.||||.|||.||
RBAM_019220__ 499 CTTGATATTAAAGAGGTTGCCGATATTAAAATGAATGCCTTAAAAGCGCA 548
BSNT_03167 549 CCGCACACAAACAGAAGGCATGCTCAGAGAGCTTGAAGAGAAATTGAAAA 598
||||||.|||||.|||||||||||.||||||||.|||||.|||.|.||||
RBAM_019220__ 549 CCGCACCCAAACGGAAGGCATGCTGAGAGAGCTGGAAGAAAAAATAAAAA 598
BSNT_03167 599 ATAATGAACCTGTTATGGCA-ACATGGTTTGAAGAAGAAATATATTGGAC 647
||||.||.||.|||.| .|| ||||||||||||||||||.|.||||||||
RBAM_019220__ 599 ATAACGAGCCGGTTCT-TCAGACATGGTTTGAAGAAGAAGTGTATTGGAC 647
BSNT_03167 648 GTATCAATGGAATGATTAA 666
.||||..|||||.||.|.|
RBAM_019220__ 648 ATATCCGTGGAAAGACTGA 666
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