Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03153 and RBAM_019130
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:02
# Commandline: needle
# -asequence dna-align/BSNT_03153___kgd.1.9828.seq
# -bsequence dna-align/RBAM_019130___sucA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03153___kgd-RBAM_019130___sucA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03153___kgd-RBAM_019130___sucA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03153___kgd
# 2: RBAM_019130___sucA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2840
# Identity: 2343/2840 (82.5%)
# Similarity: 2343/2840 (82.5%)
# Gaps: 10/2840 ( 0.4%)
# Score: 9676.5
#
#
#=======================================
BSNT_03153___ 1 ATGTTTCAAAATAGTATGAAACAACGAATGAATTGGGAAGATTTTTACGG 50
|||||||||||||.||||||||||.|||||||||||||||||||||||||
RBAM_019130__ 1 ATGTTTCAAAATAATATGAAACAAAGAATGAATTGGGAAGATTTTTACGG 50
BSNT_03153___ 51 TCCGAACCTCGGCTATGCGCTGGAGCTTTACGATCAGTATACCCAGGATC 100
.||||||||||||||.||.||||||||.|||||.||.|||.|..|.||||
RBAM_019130__ 51 ACCGAACCTCGGCTACGCACTGGAGCTGTACGACCAATATGCTGAAGATC 100
BSNT_03153___ 101 CGAACAGCATTGACCCGGATTTGAAGGAAATGTTCGACGAGCTCGGTGCT 150
|..||||||||||.||||||.||||.||.|||||.|||||.|||||.|||
RBAM_019130__ 101 CAGACAGCATTGATCCGGATCTGAAAGACATGTTTGACGAACTCGGCGCT 150
BSNT_03153___ 151 CCGCCAAGCGATATAAAAGAGGCCTCGGGAACAAAAGAAAAGGGACGTGT 200
|||||||||.|.|||||||||||.|||||||||||.|||.|||||||.||
RBAM_019130__ 151 CCGCCAAGCCAAATAAAAGAGGCATCGGGAACAAAGGAACAGGGACGCGT 200
BSNT_03153___ 201 TACAGCCGATCTGATTCAAAAGATCGCATCCGCAGTCAGACTTGCAGAAG 250
.||.||.|||||||||||||||||||||.|.|||||.|.|||||||||||
RBAM_019130__ 201 CACCGCAGATCTGATTCAAAAGATCGCAGCAGCAGTTAAACTTGCAGAAG 250
BSNT_03153___ 251 ATATCCGAACCTATGGCCATTTGAACGCTTCCGTCAATCCGCTCAGAAAG 300
||||.|||||||||||||||.|||||||||||||||||||||||||||||
RBAM_019130__ 251 ATATTCGAACCTATGGCCATCTGAACGCTTCCGTCAATCCGCTCAGAAAG 300
BSNT_03153___ 301 GATGAGAAAAAGAGCGAACTTTTTCCATTATCCGATTACGGGCTAACAGA 350
|||..||||||||||||.||.|||||.|||||||||||||||||.|||||
RBAM_019130__ 301 GATCCGAAAAAGAGCGAGCTCTTTCCGTTATCCGATTACGGGCTTACAGA 350
BSNT_03153___ 351 AGAGGAAATAAAAGCAATACCTGCGTCTGTCATCTGCAAAGACGCTCCTA 400
|||.|||||.|||||||||||.||||||||||||||.||||||||.|||.
RBAM_019130__ 351 AGAAGAAATGAAAGCAATACCCGCGTCTGTCATCTGTAAAGACGCACCTG 400
BSNT_03153___ 401 AAAACATTACGAACGGTTTAGAAGCCATTCAGTATTTACGAAATACGTAT 450
..||.||.||.|||||.|||||||||||.|||.|||||||.|||||.|||
RBAM_019130__ 401 CCAATATAACAAACGGCTTAGAAGCCATCCAGCATTTACGCAATACCTAT 450
BSNT_03153___ 451 AAAAGAACCATCTCTTTTGAATTTGACCATGTGCATGACTTCAAAGAGCG 500
||||||||||||||.||.||.|||||||||||||||||.|||.|||||||
RBAM_019130__ 451 AAAAGAACCATCTCCTTCGAGTTTGACCATGTGCATGATTTCGAAGAGCG 500
BSNT_03153___ 501 CGAGTGGCTGACAAGAAAGATTGAATCTGGCGAGCTGTTCCAGAAGAACT 550
||..|||.|.||||.||.|.|.|||||.||.||.|||||||.|||.||.|
RBAM_019130__ 501 CGCATGGATTACAAAAATGGTCGAATCCGGAGAACTGTTCCGGAAAAATT 550
BSNT_03153___ 551 CAGCTGAAAAGCTGTCAGCTGTGCTGGAAAGATTGACAGAAGTAGAGGGC 600
||.|.|||||.||||||||.||..|.||||||.||||.||||||||.||.
RBAM_019130__ 551 CACCGGAAAAACTGTCAGCCGTTTTAGAAAGACTGACGGAAGTAGAAGGA 600
BSNT_03153___ 601 TTTGAGCAGTTTTTGCACCGCACATTCGTCGGGCAGAAGCGCTTTTCCAT 650
|||||.||.|||||.|||||.|||||||||||.||||||||.||.||.||
RBAM_019130__ 601 TTTGAACAATTTTTACACCGGACATTCGTCGGTCAGAAGCGTTTCTCAAT 650
BSNT_03153___ 651 TGAGGGTCTGGACGCTCTTGTTCCAGTGCTTGATGACATTATTGCACAAT 700
||||||..|.|||||.|||||.||.||.|||||.||||||||.||.||.|
RBAM_019130__ 651 TGAGGGATTAGACGCGCTTGTGCCGGTTCTTGACGACATTATCGCCCAGT 700
BSNT_03153___ 701 CTGTCAAATCAGGCACGACAAGCGTCAACATCGGGATGGCGCACAGGGGA 750
||||.|||.|.|||||.||.|..|||||.|||||||||||||||||.||.
RBAM_019130__ 701 CTGTGAAAGCGGGCACAACCAATGTCAATATCGGGATGGCGCACAGAGGC 750
BSNT_03153___ 751 CGCCTGAATGT-CTTGGCACATGTGCTCGGCAAACCGTATGAAATCATCT 799
||..|.||||| ||| ||.|||||||||||||||||||||||.||.||.|
RBAM_019130__ 751 CGTTTAAATGTGCTT-GCGCATGTGCTCGGCAAACCGTATGAGATTATTT 799
BSNT_03153___ 800 TCTCTGAATTCCAGCATGCGCCGAATAAAGATCTTGTCCCGTCTGAGGGA 849
||||.||||||||||||||||||||||||||.|||||.||||||||.|||
RBAM_019130__ 800 TCTCAGAATTCCAGCATGCGCCGAATAAAGACCTTGTGCCGTCTGAAGGA 849
BSNT_03153___ 850 TCAATTGGAATCAGCTACGGATGGACAGGGGATGTCAAATACCATTTGGG 899
||.|..||.|||||||||||.|||||.||.|||||.||||||||..|.||
RBAM_019130__ 850 TCGACCGGCATCAGCTACGGCTGGACGGGCGATGTAAAATACCACCTCGG 899
BSNT_03153___ 900 GGCGAATCGGGAGCTTCAAGACGCTGAAACAAAATCAGCGCGCATTACGT 949
.||..|..|..|||||||.||.||||||||.|||...|||||.||||||.
RBAM_019130__ 900 TGCAGACAGACAGCTTCAGGATGCTGAAACCAAAAGTGCGCGGATTACGC 949
BSNT_03153___ 950 TAGCGAACAATCCGAGCCACTTGGAATTTATCAATCCGATTGTTGAAGGC 999
|.||.||.||.|||||||||||||||||.||||||||||||||.|||||.
RBAM_019130__ 950 TTGCAAATAACCCGAGCCACTTGGAATTCATCAATCCGATTGTGGAAGGA 999
BSNT_03153___ 1000 AGCACAAGAGCAGCACAGGAAACGCGAACACAAAGCGGATACCCGGTACA 1049
|||||..|.||.|||||||||||..||||.||||..||.||||||||.||
RBAM_019130__ 1000 AGCACGCGGGCGGCACAGGAAACAAGAACGCAAAAGGGGTACCCGGTTCA 1049
BSNT_03153___ 1050 AGATGAAACAAAATCGCTTGCCATTTTAATCCATGGAGACGCTGCATTTC 1099
|||.||||||||||||||.|||||||||||.||.||.|||||.||.||||
RBAM_019130__ 1050 AGACGAAACAAAATCGCTCGCCATTTTAATTCACGGTGACGCAGCGTTTC 1099
BSNT_03153___ 1100 CTGGGGAAGGAATTGTAGCTGAAACATTGAATTTAAGCTCTTTAAAAGGG 1149
|.||.|||||.|||||.||.||.||..||||.|||||||||.|.|||||.
RBAM_019130__ 1100 CGGGAGAAGGCATTGTCGCCGAGACGCTGAACTTAAGCTCTCTGAAAGGC 1149
BSNT_03153___ 1150 TATCAAGTAGGCGGTGCGATTCATATTATCGCCAATAACATGATCGGATT 1199
|||||.||.|||||.||.||||||||.|||||||||||.||||||||.||
RBAM_019130__ 1150 TATCAGGTCGGCGGGGCCATTCATATCATCGCCAATAATATGATCGGCTT 1199
BSNT_03153___ 1200 TACAACAGAAAGCGCTGAATCCAGATCGACAAAATATGCCAGCGACCTGG 1249
||||||.|||||||.||||||..||||.||.|||||||||||.||..|||
RBAM_019130__ 1200 TACAACTGAAAGCGATGAATCACGATCCACGAAATATGCCAGTGATTTGG 1249
BSNT_03153___ 1250 CCAAGGGTTATGAAATTCCGATTGTTCACGTGAATGCGGACGATCCTGAA 1299
|.|||||.||||||||||||||.||||||||.||.|||||.|||||.|||
RBAM_019130__ 1250 CGAAGGGCTATGAAATTCCGATCGTTCACGTCAACGCGGATGATCCGGAA 1299
BSNT_03153___ 1300 GCTTGTCTTTCAGCTGTTAAGTTTGCGGTCGAATACCGAAAAACATTCAA 1349
||.||.||.|||||.|||||.||||||||.||||||||.||....|||||
RBAM_019130__ 1300 GCATGCCTGTCAGCCGTTAAATTTGCGGTTGAATACCGGAAGCGGTTCAA 1349
BSNT_03153___ 1350 CAAGGATTTTCTGATTGATTTGATCGGGTACAGACGCTATGGACACAACG 1399
.||.|||||..|.||.|||||.||||||||||||||.||.||.|||||.|
RBAM_019130__ 1350 TAAAGATTTCTTAATCGATTTAATCGGGTACAGACGGTACGGCCACAATG 1399
BSNT_03153___ 1400 AAATGGATGAACCGTCAACCACTCAGCCAATGCTGTATGATGCTGTCAGA 1449
||||||||||.||||||||.||.|||||.|||||||||||.||.||||||
RBAM_019130__ 1400 AAATGGATGAGCCGTCAACGACACAGCCGATGCTGTATGACGCCGTCAGA 1449
BSNT_03153___ 1450 AAGCATCCGACCGTCAAACAAATTTTCGCTGAAAAGCTGGTAAAAGAAGG 1499
||.||.|||||.|||||.|..||.||.||.|||||.||.||||..|||||
RBAM_019130__ 1450 AAACACCCGACTGTCAAGCGGATCTTTGCGGAAAAACTCGTAAGTGAAGG 1499
BSNT_03153___ 1500 CGTGCTTACCGAGGAAGTCGTTCAAAACATCGAAAAATCGGTAACGAAGC 1549
..||.|.|.|||||||...|..|||||||||||||...|.||.||.||.|
RBAM_019130__ 1500 TCTGATCAGCGAGGAAAAAGCGCAAAACATCGAAACGGCAGTGACAAAAC 1549
BSNT_03153___ 1550 GCATTGAGGATGCATATCAGAAAGTTCCGTCTAAAAAGGAACACACTGCT 1599
|.|||||.||.||.|||.|.||.||.||..|.|||||.|||.||.|.|..
RBAM_019130__ 1550 GAATTGAAGACGCCTATAAAAAGGTGCCCGCCAAAAAAGAAGACGCCGTA 1599
BSNT_03153___ 1600 TGTGAAATTGAACTTCCAGAGCCTGTATCAAACGGTTTCCCAGATGTGGA 1649
.|.|||||||||.|.||.||.||.||.||.||||||||.|||||.||.||
RBAM_019130__ 1600 CGGGAAATTGAATTGCCGGAACCGGTGTCCAACGGTTTTCCAGACGTTGA 1649
BSNT_03153___ 1650 CACTTCGATTGATTTTGATGTGCTCCGCAAGTTGAATGGCGAATTGATCA 1699
|||..|.|||||.||||||||.|||||||||.||||.||||||.|.||||
RBAM_019130__ 1650 CACAGCCATTGACTTTGATGTTCTCCGCAAGCTGAACGGCGAACTTATCA 1699
BSNT_03153___ 1700 ACTGGCCGGAGTCATTTAATGTTTTCGGCAAGCTAAAGCGCATTTTAGAA 1749
||||||||||.||.|||||.||.|||||||||||.||..|.||..|.|||
RBAM_019130__ 1700 ACTGGCCGGAATCTTTTAACGTGTTCGGCAAGCTGAAAAGAATCCTGGAA 1749
BSNT_03153___ 1750 AGACGCGCCAAGGCGTTCGATGATGACAGAAAAGTGGAATGGTCTTTGGC 1799
|||||.||.||.|||||.|||||||||.|.|||||.||||||||.|||||
RBAM_019130__ 1750 AGACGTGCAAAAGCGTTTGATGATGACCGTAAAGTTGAATGGTCATTGGC 1799
BSNT_03153___ 1800 AGAATCACTCGCGTTTGCTTCAATTATGAAAGACGGAACACCGATTCGTT 1849
.|||||.||.|||||||||||.|||.||||||||||.||.|||||.||..
RBAM_019130__ 1800 TGAATCGCTTGCGTTTGCTTCCATTTTGAAAGACGGCACGCCGATCCGGC 1849
BSNT_03153___ 1850 TAACAGGACAGGATTCCGAGCGCGGAACGTTCGCCCAAAGAAACCTTGTG 1899
|.||.|||||||||||.|||||||||||||||||.|||||||||||||||
RBAM_019130__ 1850 TGACCGGACAGGATTCAGAGCGCGGAACGTTCGCTCAAAGAAACCTTGTG 1899
BSNT_03153___ 1900 CTTCATGACAGTGAGACGGGCAAAGAATTTG-TGCCGCTTCATCACTTAT 1948
||.||||||||.||.||.||..||||||||| |||| ||.|||||||||.
RBAM_019130__ 1900 CTGCATGACAGCGAAACAGGAGAAGAATTTGTTGCC-CTCCATCACTTAG 1948
BSNT_03153___ 1949 CTGACTGCAGC-ACATCATTTGCTGTTCATAACAGCCCGCTGTCTGAAGG 1997
..|||||| || .|.||||||.|.||.||||||||||||||.||||||||
RBAM_019130__ 1949 ACGACTGC-GCTGCTTCATTTACGGTGCATAACAGCCCGCTCTCTGAAGG 1997
BSNT_03153___ 1998 ATCGGTTCTCGGTTTTGAATACGGCTATAACGTGCATTCACCGGAAACGC 2047
||||||||||||.||||||||.||.||.||||||.||||.||.|||||||
RBAM_019130__ 1998 ATCGGTTCTCGGCTTTGAATATGGATACAACGTGTATTCGCCTGAAACGC 2047
BSNT_03153___ 2048 TTGTTTTGTGGGAAGCACAGTACGGAGATTTTGCCAACGCTGCTCAAGTG 2097
||||..|||||||.||.||||||||.||.|||||.||.||.||||||||.
RBAM_019130__ 2048 TTGTGATGTGGGAGGCGCAGTACGGGGACTTTGCTAATGCGGCTCAAGTC 2097
BSNT_03153___ 2098 TATTTTGACCAATTTATTTCTGCCGGACGCGCGAAATGGGGCCAAAAATC 2147
||||||||.|||||.||.|||||.|||||.||.||||||||.||||||||
RBAM_019130__ 2098 TATTTTGATCAATTCATATCTGCAGGACGGGCAAAATGGGGACAAAAATC 2147
BSNT_03153___ 2148 CGGATTAGTCATGTTGCTCCCGCACGGTTACGAGGGACAGGGGCCTGAGC 2197
.|||.|.||||||.||||.||.|||||||||||.||.|||||.|||||.|
RBAM_019130__ 2148 AGGACTGGTCATGCTGCTGCCTCACGGTTACGAAGGGCAGGGCCCTGAAC 2197
BSNT_03153___ 2198 ACTCAAGCGGAAGAATCGAGCGATTCCTGCAGCTTGCAGCGGAAAACAAC 2247
||||.|||||..|..|||||||.|||||||||||.||.||||||||||||
RBAM_019130__ 2198 ACTCCAGCGGCCGCGTCGAGCGGTTCCTGCAGCTGGCGGCGGAAAACAAC 2247
BSNT_03153___ 2248 TGGACGGTTGCCAACCTGACAAGCGCGGCACAGTATTTCCATATTTTAAG 2297
||||||||.||||||||||||||.|||||.|||||||||||.||||||||
RBAM_019130__ 2248 TGGACGGTGGCCAACCTGACAAGTGCGGCTCAGTATTTCCACATTTTAAG 2297
BSNT_03153___ 2298 AAGACAGGCTAAAATGCTGCTTCGTGAAGAAATCAGACCGCTCGTCATTA 2347
||||||.||.|||||||||||||||||.||||||.|.|||||.||.||.|
RBAM_019130__ 2298 AAGACAAGCGAAAATGCTGCTTCGTGAGGAAATCCGCCCGCTTGTGATCA 2347
BSNT_03153___ 2348 TGACGCCGAAGAGCCTTCTTCGCAACCCAAATACGGTGTCGGAAGTGCAG 2397
||||||||||||||||.||.||||||||.||||||||.||.|||||||||
RBAM_019130__ 2348 TGACGCCGAAGAGCCTGCTGCGCAACCCGAATACGGTATCTGAAGTGCAG 2397
BSNT_03153___ 2398 GAGCTCAGCGAAAGCCGCTTCCAGCCTGTTTATGAACAGTCGGGACTTTC 2447
||.||.|||||||||||.|||.|||||||.|||||.|||||.||.|||||
RBAM_019130__ 2398 GAACTGAGCGAAAGCCGATTCAAGCCTGTCTATGAGCAGTCCGGTCTTTC 2447
BSNT_03153___ 2448 TCATGACTATGAAAAAGTAACCAGACTTGTATTATCCAGCGGTAAAGTGT 2497
.||||..||.||||||||.||..|..|.||||||||.|||||.|||||||
RBAM_019130__ 2448 CCATGCTTACGAAAAAGTGACTCGCGTCGTATTATCAAGCGGAAAAGTGT 2497
BSNT_03153___ 2498 CTATAGACATTAGCGATCATTTTAATAAGTTAGAAGACGGTAAAGAGTGG 2547
|.||.||.||.||||||||.||.||.||..|.||||.||.|||.||.|||
RBAM_019130__ 2498 CAATTGATATCAGCGATCACTTCAACAAAATGGAAGGCGATAAGGATTGG 2547
BSNT_03153___ 2548 CTTCACATTGCGAGAATCGAACAGCTGTATCCATTCCCGGCAAAAGGAGT 2597
|||||.|||||.||||||||||||||||||||.|||||||||||| ||..
RBAM_019130__ 2548 CTTCATATTGCCAGAATCGAACAGCTGTATCCGTTCCCGGCAAAA-GATA 2596
BSNT_03153___ 2598 CAAAGAA--TTATTTGCAAAACTTCCGAACCTGAAAGAAATCGTTTGGGT 2645
|.|||.| || ||.||.|||||.|||||||||.||||.|||||||||||
RBAM_019130__ 2597 CGAAGGAGCTT-TTCGCCAAACTGCCGAACCTGCAAGAGATCGTTTGGGT 2645
BSNT_03153___ 2646 GCAGGAAGAGCCGCAGAACATGGGGGCTTGGGGTTATATCAGCCCGTATT 2695
.||||||||||||||||||||||||||.|||.|||||||||||||||||.
RBAM_019130__ 2646 TCAGGAAGAGCCGCAGAACATGGGGGCATGGAGTTATATCAGCCCGTATC 2695
BSNT_03153___ 2696 TGACAGAGATTGCACCAGAGGGAGTAAGCGTTCAATATATTGGACGAAGA 2745
||.|.||.||.||.|||.|.|||||||..||.|||||.||.||.||||||
RBAM_019130__ 2696 TGTCGGAAATCGCGCCAAAAGGAGTAAATGTCCAATACATCGGCCGAAGA 2745
BSNT_03153___ 2746 AGACGATCCAGCCCTGCAGAGGGAGATCCGACAGTTCATAAAAAAGAACA 2795
|||||||||||.||.|||||.||||||||||||||.||.|||||||||||
RBAM_019130__ 2746 AGACGATCCAGTCCCGCAGAAGGAGATCCGACAGTCCACAAAAAAGAACA 2795
BSNT_03153___ 2796 GGAACGTATTGTATCTGATAGCTTGACTCGCAAAAACTAA 2835
||||||.|||||||||||||||||||||||||||||||||
RBAM_019130__ 2796 GGAACGCATTGTATCTGATAGCTTGACTCGCAAAAACTAA 2835
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