Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03146 and RBAM_019060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:00
# Commandline: needle
# -asequence dna-align/BSNT_03146___dhaS.1.9828.seq
# -bsequence dna-align/RBAM_019060___dhaS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03146___dhaS-RBAM_019060___dhaS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03146___dhaS-RBAM_019060___dhaS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03146___dhaS
# 2: RBAM_019060___dhaS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1490
# Identity: 1198/1490 (80.4%)
# Similarity: 1198/1490 (80.4%)
# Gaps: 4/1490 ( 0.3%)
# Score: 4807.5
#
#
#=======================================
BSNT_03146___ 1 ATGAGTTCTTTAACGATGCAAGTGACGAAAAGGCTGGAGACATTTTTACA 50
||||||||||||||||||||..|.||.|||||||||||.|||||||||||
RBAM_019060__ 1 ATGAGTTCTTTAACGATGCAGATCACAAAAAGGCTGGAAACATTTTTACA 50
BSNT_03146___ 51 GGGAACAAAGAAGCTTTATATTGACGGTAAGTTTGTTCCGAGTGCCTCAG 100
|||.||.|||||.||||||||||||||.||.|||||||||||..|.||||
RBAM_019060__ 51 GGGTACGAAGAAACTTTATATTGACGGAAAATTTGTTCCGAGCACTTCAG 100
BSNT_03146___ 101 GGGCAACCTTTGACACTCCAAACCCGGCGACCGGCGAAACCTTGATGACG 150
|..||||.||||.|||.||.||.|||||.|||||.|||||..||||||||
RBAM_019060__ 101 GATCAACATTTGTCACACCGAATCCGGCAACCGGAGAAACGCTGATGACG 150
BSNT_03146___ 151 CTGTATGAAGCCCAGGCTGCGGATGTGGACAAAGCGGTTAAAGCTGCCCG 200
||.||.||.||.|||.|.|..||..|.||||..||.||.|||||.||.||
RBAM_019060__ 151 CTTTACGAGGCACAGTCAGAAGACATTGACAGTGCAGTGAAAGCGGCACG 200
BSNT_03146___ 201 GAAAGCCTTTGACCAAGGTGAATGGAGAACAATGTCTCCAGCTTCGAGAA 250
.|||||||||||.||.||.||||||.|.||.|||.|..|.|||||.||||
RBAM_019060__ 201 CAAAGCCTTTGATCACGGCGAATGGCGCACTATGCCGGCCGCTTCCAGAA 250
BSNT_03146___ 251 GCAGACTGATGTATAAGCTGGCGGACTTAATGGAAGAGCATAAAACTGAG 300
||||.||||||||||||||.||.||.||||||||||||||.|||||.||.
RBAM_019060__ 251 GCAGGCTGATGTATAAGCTTGCCGATTTAATGGAAGAGCACAAAACGGAA 300
BSNT_03146___ 301 CTTGCTCAGCTTGAAACACTTGATAATGGGAAACCGATCAATGAAACGAC 350
||.||.||||||||||||||||||||.||.||||||||.||||||||.||
RBAM_019060__ 301 CTCGCGCAGCTTGAAACACTTGATAACGGAAAACCGATTAATGAAACAAC 350
BSNT_03146___ 351 TAATGGAGATATTCCGCTGGCTATTGAGCATATGCGCTATTACGCCGGCT 400
.|||||.|||||.|||||.||.||||||||||||||.|||||.|||||.|
RBAM_019060__ 351 AAATGGGGATATCCCGCTCGCAATTGAGCATATGCGTTATTATGCCGGGT 400
BSNT_03146___ 401 GGTGTACAAAAATAACAGGACAGACGATTCCGGTTTCCGGCGCTTATTTT 450
|||.||||||.|||||.|||||.|||||||||||..|||||.|.||||||
RBAM_019060__ 401 GGTCTACAAAGATAACCGGACAAACGATTCCGGTCGCCGGCTCATATTTT 450
BSNT_03146___ 451 AATTATACGCGTCATGAGCCTGTCGGTGTCGTCGGCCAGATCATTCCATG 500
|||||.||.||.||||||||||||||.|||||.||.||||||||.||.||
RBAM_019060__ 451 AATTACACCCGCCATGAGCCTGTCGGCGTCGTGGGGCAGATCATCCCTTG 500
BSNT_03146___ 501 GAATTTCCCGCTCCTGATGGCGATGTGGAAAATGGGCGCGGCACTTGCAA 550
|||.|||||||||||.|||||||||||||||||||||||.||.|||||.|
RBAM_019060__ 501 GAACTTCCCGCTCCTTATGGCGATGTGGAAAATGGGCGCCGCCCTTGCCA 550
BSNT_03146___ 551 CAGGCTGTACAATCGTCCTCAAACCGGCTGAACAAACACCGCTTTCAGCT 600
|||||||.||||||||..|.||||||||.|||||.||||||||..|.||.
RBAM_019060__ 551 CAGGCTGCACAATCGTTTTGAAACCGGCGGAACAGACACCGCTGACCGCC 600
BSNT_03146___ 601 CTTTATTTGGCAGAATTAATTGACCAAGCCGGTTTCCCTGCCGGTGTAAT 650
||.|||||.||.||.|||||.||.||.||.||.|||||||.|||.||.||
RBAM_019060__ 601 CTCTATTTAGCGGAGTTAATAGATCAGGCGGGCTTCCCTGACGGCGTCAT 650
BSNT_03146___ 651 CAACATCATCCCGGGATTCGGTGAAGATG--CGGGAGAAGCGCTGACGAA 698
|||.||..||||.||.|||||.| |||.| |||| |||||||||||.||
RBAM_019060__ 651 CAATATTGTCCCAGGGTTCGGCG-AGACGGCCGGG-GAAGCGCTGACCAA 698
BSNT_03146___ 699 CCACGAAGCGGTTGATAAAATTGCCTTTACCGGTTCCACTGAAATCGGAA 748
|||.||.|..||.||||||.|.||.|||||||||||.||.||||||||.|
RBAM_019060__ 699 CCATGACGATGTCGATAAACTCGCTTTTACCGGTTCTACAGAAATCGGCA 748
BSNT_03146___ 749 AGAAAATCATGTCCACCGCAGCGAAAAGCATTAAGCGTGTTACATTGGAG 798
|.|||||||||...|..||.||.||||..|||||.||.||.|||.|||||
RBAM_019060__ 749 AAAAAATCATGGAAAAAGCCGCAAAAAAAATTAAACGCGTGACACTGGAG 798
BSNT_03146___ 799 CTGGGCGGAAAATCACCTAATATTCTTCTGCCGGATGCGAATTTGAAAAA 848
||.||||||||.||||||||.||..||.||||.||.||.||||||||.||
RBAM_019060__ 799 CTTGGCGGAAAGTCACCTAACATCATTTTGCCTGACGCCAATTTGAAGAA 848
BSNT_03146___ 849 AGCCATCCCGGGCGCTTTAAACGGTGTGATGTTTAACCAGGGCCAAGTCT 898
||||||.||.||||||||||||||.||.||||||||.|||||.||.||.|
RBAM_019060__ 849 AGCCATTCCCGGCGCTTTAAACGGGGTCATGTTTAATCAGGGGCAGGTAT 898
BSNT_03146___ 899 GCTGTGCGGGCTCACGTGTCTTCATTCATAAAGACCAATATGATGAAGTT 948
||||.||.|||||.||||||||||||||.||||||.||||||||||.||.
RBAM_019060__ 899 GCTGCGCAGGCTCCCGTGTCTTCATTCACAAAGACAAATATGATGAGGTC 948
BSNT_03146___ 949 GTTGATGAAATGGCGTCCTATGCTGAGTCACTCCGCCAAGGAGCGGGACT 998
||....|||||||..||.|||||..|.||.||.|..|||||.||.||.||
RBAM_019060__ 949 GTCAGCGAAATGGTTTCATATGCGAAATCGCTTCAGCAAGGCGCCGGCCT 998
BSNT_03146___ 999 TCATAAAGATACTCAAATCGGGCCTCTCGTAAGCAAGGAACAGCATGAGC 1048
|||..|||||||.||||||||.||.|||||.||..|||||||||||||||
RBAM_019060__ 999 TCACCAAGATACACAAATCGGCCCGCTCGTCAGTCAGGAACAGCATGAGC 1048
BSNT_03146___ 1049 GCGTTCTTTCCTATATTCAAAAAGGAAAAGATGAAGGAGCAAAAGCAGTG 1098
||||.|||||.||||||.||||||||||||..||||||||.|||||.||.
RBAM_019060__ 1049 GCGTGCTTTCATATATTGAAAAAGGAAAAGCGGAAGGAGCCAAAGCTGTC 1098
BSNT_03146___ 1099 ACCGGCGGAAGCTGTCCTTTTGAAGCAGGATATTTTGTCGCACCGACTGT 1148
.|.|||||.|||||.||.|||||||.|||.|||||||||.|.||||||||
RBAM_019060__ 1099 GCGGGCGGCAGCTGCCCGTTTGAAGAAGGGTATTTTGTCTCCCCGACTGT 1148
BSNT_03146___ 1149 GTTTGCGAATGTTGAAGACGAAATGACCATCGCAAAAGAAGAAATTTTCG 1198
.||||||.||||.||.|||...||||||||||||||||||||||||||||
RBAM_019060__ 1149 ATTTGCGGATGTGGATGACAGCATGACCATCGCAAAAGAAGAAATTTTCG 1198
BSNT_03146___ 1199 GACCCGTGCTGACTGCAATTCCGTACGAAACAGTCGATGAAGTTATTGAA 1248
|.||.||..|..|.||.||||||||.||.||.||.||||||||.|||||.
RBAM_019060__ 1199 GCCCTGTTTTAGCCGCCATTCCGTATGATACGGTAGATGAAGTCATTGAG 1248
BSNT_03146___ 1249 CGGGCAAACCATTCAGAATATGGGCTTGCAGCCGGACTATGGACAGAGAA 1298
|||||.||||..||.|||||.||.||||||||||||||.|||||.|||||
RBAM_019060__ 1249 CGGGCGAACCGCTCGGAATACGGCCTTGCAGCCGGACTTTGGACTGAGAA 1298
BSNT_03146___ 1299 CGTCAAGCAGGCTCACTATATCGCGGACCGACTTCAAGCCGGAACCGTTT 1348
.||.||..|.||.||.||.||.||.|||||.||.||||||||.|||||||
RBAM_019060__ 1299 TGTGAAAAACGCCCATTACATTGCTGACCGTCTCCAAGCCGGCACCGTTT 1348
BSNT_03146___ 1349 GGGTCAACTGCTATAATGTGTTTGACGCGGCGTCTCCATTTGGCGGTTAT 1398
|||||||||||||.|||||.||.||.|||||.|||||.||.|||||.|||
RBAM_019060__ 1349 GGGTCAACTGCTACAATGTTTTCGATGCGGCATCTCCTTTCGGCGGCTAT 1398
BSNT_03146___ 1399 AAACAGTCAGGACTCGGACGAGAAATGGGATCATATGCCTTGGATAATTA 1448
||.||.||.||.|||||.||.||||||||.||.||.||..||.|||||||
RBAM_019060__ 1399 AAGCAATCCGGCCTCGGGCGGGAAATGGGCTCTTACGCGCTGAATAATTA 1448
BSNT_03146___ 1449 CACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAA 1488
.||||||||.|||||.||.|||.|.||.||.|||||.|||
RBAM_019060__ 1449 TACAGAAGTGAAAAGCGTCTGGATCAATCTGGAAGATTAA 1488
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Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.