Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03146 and RBAM_019060

See Amino acid alignment / Visit BSNT_03146 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:00
# Commandline: needle
#    -asequence dna-align/BSNT_03146___dhaS.1.9828.seq
#    -bsequence dna-align/RBAM_019060___dhaS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03146___dhaS-RBAM_019060___dhaS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03146___dhaS-RBAM_019060___dhaS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03146___dhaS
# 2: RBAM_019060___dhaS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1490
# Identity:    1198/1490 (80.4%)
# Similarity:  1198/1490 (80.4%)
# Gaps:           4/1490 ( 0.3%)
# Score: 4807.5
# 
#
#=======================================

BSNT_03146___      1 ATGAGTTCTTTAACGATGCAAGTGACGAAAAGGCTGGAGACATTTTTACA     50
                     ||||||||||||||||||||..|.||.|||||||||||.|||||||||||
RBAM_019060__      1 ATGAGTTCTTTAACGATGCAGATCACAAAAAGGCTGGAAACATTTTTACA     50

BSNT_03146___     51 GGGAACAAAGAAGCTTTATATTGACGGTAAGTTTGTTCCGAGTGCCTCAG    100
                     |||.||.|||||.||||||||||||||.||.|||||||||||..|.||||
RBAM_019060__     51 GGGTACGAAGAAACTTTATATTGACGGAAAATTTGTTCCGAGCACTTCAG    100

BSNT_03146___    101 GGGCAACCTTTGACACTCCAAACCCGGCGACCGGCGAAACCTTGATGACG    150
                     |..||||.||||.|||.||.||.|||||.|||||.|||||..||||||||
RBAM_019060__    101 GATCAACATTTGTCACACCGAATCCGGCAACCGGAGAAACGCTGATGACG    150

BSNT_03146___    151 CTGTATGAAGCCCAGGCTGCGGATGTGGACAAAGCGGTTAAAGCTGCCCG    200
                     ||.||.||.||.|||.|.|..||..|.||||..||.||.|||||.||.||
RBAM_019060__    151 CTTTACGAGGCACAGTCAGAAGACATTGACAGTGCAGTGAAAGCGGCACG    200

BSNT_03146___    201 GAAAGCCTTTGACCAAGGTGAATGGAGAACAATGTCTCCAGCTTCGAGAA    250
                     .|||||||||||.||.||.||||||.|.||.|||.|..|.|||||.||||
RBAM_019060__    201 CAAAGCCTTTGATCACGGCGAATGGCGCACTATGCCGGCCGCTTCCAGAA    250

BSNT_03146___    251 GCAGACTGATGTATAAGCTGGCGGACTTAATGGAAGAGCATAAAACTGAG    300
                     ||||.||||||||||||||.||.||.||||||||||||||.|||||.||.
RBAM_019060__    251 GCAGGCTGATGTATAAGCTTGCCGATTTAATGGAAGAGCACAAAACGGAA    300

BSNT_03146___    301 CTTGCTCAGCTTGAAACACTTGATAATGGGAAACCGATCAATGAAACGAC    350
                     ||.||.||||||||||||||||||||.||.||||||||.||||||||.||
RBAM_019060__    301 CTCGCGCAGCTTGAAACACTTGATAACGGAAAACCGATTAATGAAACAAC    350

BSNT_03146___    351 TAATGGAGATATTCCGCTGGCTATTGAGCATATGCGCTATTACGCCGGCT    400
                     .|||||.|||||.|||||.||.||||||||||||||.|||||.|||||.|
RBAM_019060__    351 AAATGGGGATATCCCGCTCGCAATTGAGCATATGCGTTATTATGCCGGGT    400

BSNT_03146___    401 GGTGTACAAAAATAACAGGACAGACGATTCCGGTTTCCGGCGCTTATTTT    450
                     |||.||||||.|||||.|||||.|||||||||||..|||||.|.||||||
RBAM_019060__    401 GGTCTACAAAGATAACCGGACAAACGATTCCGGTCGCCGGCTCATATTTT    450

BSNT_03146___    451 AATTATACGCGTCATGAGCCTGTCGGTGTCGTCGGCCAGATCATTCCATG    500
                     |||||.||.||.||||||||||||||.|||||.||.||||||||.||.||
RBAM_019060__    451 AATTACACCCGCCATGAGCCTGTCGGCGTCGTGGGGCAGATCATCCCTTG    500

BSNT_03146___    501 GAATTTCCCGCTCCTGATGGCGATGTGGAAAATGGGCGCGGCACTTGCAA    550
                     |||.|||||||||||.|||||||||||||||||||||||.||.|||||.|
RBAM_019060__    501 GAACTTCCCGCTCCTTATGGCGATGTGGAAAATGGGCGCCGCCCTTGCCA    550

BSNT_03146___    551 CAGGCTGTACAATCGTCCTCAAACCGGCTGAACAAACACCGCTTTCAGCT    600
                     |||||||.||||||||..|.||||||||.|||||.||||||||..|.||.
RBAM_019060__    551 CAGGCTGCACAATCGTTTTGAAACCGGCGGAACAGACACCGCTGACCGCC    600

BSNT_03146___    601 CTTTATTTGGCAGAATTAATTGACCAAGCCGGTTTCCCTGCCGGTGTAAT    650
                     ||.|||||.||.||.|||||.||.||.||.||.|||||||.|||.||.||
RBAM_019060__    601 CTCTATTTAGCGGAGTTAATAGATCAGGCGGGCTTCCCTGACGGCGTCAT    650

BSNT_03146___    651 CAACATCATCCCGGGATTCGGTGAAGATG--CGGGAGAAGCGCTGACGAA    698
                     |||.||..||||.||.|||||.| |||.|  |||| |||||||||||.||
RBAM_019060__    651 CAATATTGTCCCAGGGTTCGGCG-AGACGGCCGGG-GAAGCGCTGACCAA    698

BSNT_03146___    699 CCACGAAGCGGTTGATAAAATTGCCTTTACCGGTTCCACTGAAATCGGAA    748
                     |||.||.|..||.||||||.|.||.|||||||||||.||.||||||||.|
RBAM_019060__    699 CCATGACGATGTCGATAAACTCGCTTTTACCGGTTCTACAGAAATCGGCA    748

BSNT_03146___    749 AGAAAATCATGTCCACCGCAGCGAAAAGCATTAAGCGTGTTACATTGGAG    798
                     |.|||||||||...|..||.||.||||..|||||.||.||.|||.|||||
RBAM_019060__    749 AAAAAATCATGGAAAAAGCCGCAAAAAAAATTAAACGCGTGACACTGGAG    798

BSNT_03146___    799 CTGGGCGGAAAATCACCTAATATTCTTCTGCCGGATGCGAATTTGAAAAA    848
                     ||.||||||||.||||||||.||..||.||||.||.||.||||||||.||
RBAM_019060__    799 CTTGGCGGAAAGTCACCTAACATCATTTTGCCTGACGCCAATTTGAAGAA    848

BSNT_03146___    849 AGCCATCCCGGGCGCTTTAAACGGTGTGATGTTTAACCAGGGCCAAGTCT    898
                     ||||||.||.||||||||||||||.||.||||||||.|||||.||.||.|
RBAM_019060__    849 AGCCATTCCCGGCGCTTTAAACGGGGTCATGTTTAATCAGGGGCAGGTAT    898

BSNT_03146___    899 GCTGTGCGGGCTCACGTGTCTTCATTCATAAAGACCAATATGATGAAGTT    948
                     ||||.||.|||||.||||||||||||||.||||||.||||||||||.||.
RBAM_019060__    899 GCTGCGCAGGCTCCCGTGTCTTCATTCACAAAGACAAATATGATGAGGTC    948

BSNT_03146___    949 GTTGATGAAATGGCGTCCTATGCTGAGTCACTCCGCCAAGGAGCGGGACT    998
                     ||....|||||||..||.|||||..|.||.||.|..|||||.||.||.||
RBAM_019060__    949 GTCAGCGAAATGGTTTCATATGCGAAATCGCTTCAGCAAGGCGCCGGCCT    998

BSNT_03146___    999 TCATAAAGATACTCAAATCGGGCCTCTCGTAAGCAAGGAACAGCATGAGC   1048
                     |||..|||||||.||||||||.||.|||||.||..|||||||||||||||
RBAM_019060__    999 TCACCAAGATACACAAATCGGCCCGCTCGTCAGTCAGGAACAGCATGAGC   1048

BSNT_03146___   1049 GCGTTCTTTCCTATATTCAAAAAGGAAAAGATGAAGGAGCAAAAGCAGTG   1098
                     ||||.|||||.||||||.||||||||||||..||||||||.|||||.||.
RBAM_019060__   1049 GCGTGCTTTCATATATTGAAAAAGGAAAAGCGGAAGGAGCCAAAGCTGTC   1098

BSNT_03146___   1099 ACCGGCGGAAGCTGTCCTTTTGAAGCAGGATATTTTGTCGCACCGACTGT   1148
                     .|.|||||.|||||.||.|||||||.|||.|||||||||.|.||||||||
RBAM_019060__   1099 GCGGGCGGCAGCTGCCCGTTTGAAGAAGGGTATTTTGTCTCCCCGACTGT   1148

BSNT_03146___   1149 GTTTGCGAATGTTGAAGACGAAATGACCATCGCAAAAGAAGAAATTTTCG   1198
                     .||||||.||||.||.|||...||||||||||||||||||||||||||||
RBAM_019060__   1149 ATTTGCGGATGTGGATGACAGCATGACCATCGCAAAAGAAGAAATTTTCG   1198

BSNT_03146___   1199 GACCCGTGCTGACTGCAATTCCGTACGAAACAGTCGATGAAGTTATTGAA   1248
                     |.||.||..|..|.||.||||||||.||.||.||.||||||||.|||||.
RBAM_019060__   1199 GCCCTGTTTTAGCCGCCATTCCGTATGATACGGTAGATGAAGTCATTGAG   1248

BSNT_03146___   1249 CGGGCAAACCATTCAGAATATGGGCTTGCAGCCGGACTATGGACAGAGAA   1298
                     |||||.||||..||.|||||.||.||||||||||||||.|||||.|||||
RBAM_019060__   1249 CGGGCGAACCGCTCGGAATACGGCCTTGCAGCCGGACTTTGGACTGAGAA   1298

BSNT_03146___   1299 CGTCAAGCAGGCTCACTATATCGCGGACCGACTTCAAGCCGGAACCGTTT   1348
                     .||.||..|.||.||.||.||.||.|||||.||.||||||||.|||||||
RBAM_019060__   1299 TGTGAAAAACGCCCATTACATTGCTGACCGTCTCCAAGCCGGCACCGTTT   1348

BSNT_03146___   1349 GGGTCAACTGCTATAATGTGTTTGACGCGGCGTCTCCATTTGGCGGTTAT   1398
                     |||||||||||||.|||||.||.||.|||||.|||||.||.|||||.|||
RBAM_019060__   1349 GGGTCAACTGCTACAATGTTTTCGATGCGGCATCTCCTTTCGGCGGCTAT   1398

BSNT_03146___   1399 AAACAGTCAGGACTCGGACGAGAAATGGGATCATATGCCTTGGATAATTA   1448
                     ||.||.||.||.|||||.||.||||||||.||.||.||..||.|||||||
RBAM_019060__   1399 AAGCAATCCGGCCTCGGGCGGGAAATGGGCTCTTACGCGCTGAATAATTA   1448

BSNT_03146___   1449 CACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAA   1488
                     .||||||||.|||||.||.|||.|.||.||.|||||.|||
RBAM_019060__   1449 TACAGAAGTGAAAAGCGTCTGGATCAATCTGGAAGATTAA   1488


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