Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03144 and RBAM_019050
See
Amino acid alignment /
Visit
BSNT_03144 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:00
# Commandline: needle
# -asequence dna-align/BSNT_03144___yozC.1.9828.seq
# -bsequence dna-align/RBAM_019050___yozC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03144___yozC-RBAM_019050___yozC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03144___yozC-RBAM_019050___yozC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03144___yozC
# 2: RBAM_019050___yozC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 205
# Identity: 156/205 (76.1%)
# Similarity: 156/205 (76.1%)
# Gaps: 2/205 ( 1.0%)
# Score: 572.0
#
#
#=======================================
BSNT_03144___ 1 ATGATTCATAAAAATTGGCTTGA-AAAAGAAACAATTAAAAAAGTAAAGT 49
|||||||||||.||||||| .|| ||||||||...|.|||||.||.||.|
RBAM_019050__ 1 ATGATTCATAATAATTGGC-AGACAAAAGAAAGCGTCAAAAAGGTCAAAT 49
BSNT_03144___ 50 GTGTGCAGACAAACGCAAAAAAATATATCGTAAACCGCGTTTTAACGCCG 99
|.||.||.|||.|.||.||||||||.||.||.||....||..|.||||||
RBAM_019050__ 50 GCGTACATACAGATGCGAAAAAATACATTGTCAAAAATGTGCTGACGCCG 99
BSNT_03144___ 100 GGAAAAGAATATGAAGTAAAAAATGAAACAGAGGAGTTTCTCTTTGTGGT 149
||.|||||.||||||||.||||||||||||||.||.||..|.|||||.||
RBAM_019050__ 100 GGTAAAGAGTATGAAGTCAAAAATGAAACAGAAGAATTCATTTTTGTTGT 149
BSNT_03144___ 150 CGACAATACGAATAAAGTCGGCGGCTATTATAAAGAATACTTCGAAGAGA 199
.||||||||.||.||||||||.||||..||.|||||.||.||.|||||..
RBAM_019050__ 150 AGACAATACAAACAAAGTCGGAGGCTTCTACAAAGAGTATTTTGAAGAAG 199
BSNT_03144___ 200 TGTAA 204
|.|||
RBAM_019050__ 200 TTTAA 204
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.