Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03143 and RBAM_019030

See Amino acid alignment / Visit BSNT_03143 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:00
# Commandline: needle
#    -asequence dna-align/BSNT_03143___yozO.1.9828.seq
#    -bsequence dna-align/RBAM_019030___yozO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03143___yozO-RBAM_019030___yozO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03143___yozO-RBAM_019030___yozO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03143___yozO
# 2: RBAM_019030___yozO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     286/345 (82.9%)
# Similarity:   286/345 (82.9%)
# Gaps:           0/345 ( 0.0%)
# Score: 1194.0
# 
#
#=======================================

BSNT_03143___      1 TTGGGTATTTTTTCTGTTAGCAGATCAACGGACGCAAAGAAGCTTGAGGC     50
                     |||||.|||||||||||.|||||||||||.|||.||||.|||||.|||||
RBAM_019030__      1 TTGGGAATTTTTTCTGTCAGCAGATCAACCGACACAAAAAAGCTGGAGGC     50

BSNT_03143___     51 TTTGCTCGTTGAAGGGGAAAGAATAGAATCGATTTATAAGCTCCGAGTGG    100
                     ||||||||||||.||.|||.|.||.|||.||||||||||.||.||.||.|
RBAM_019030__     51 TTTGCTCGTTGAGGGAGAACGGATCGAAACGATTTATAAACTGCGGGTTG    100

BSNT_03143___    101 ACCAAATTTGCTTTACAAATAAGCGGATCATTTTCTTTGACAATAAAATG    150
                     |||||||.||||||||.|||||.||..|.|||||||||||.|||||||||
RBAM_019030__    101 ACCAAATATGCTTTACGAATAAACGAGTGATTTTCTTTGATAATAAAATG    150

BSNT_03143___    151 TTTTCTAAAAAGAAGGTTCGTGTATTTCTTCCATATAAAACAATTGAAAG    200
                     ||.||.||||||||.||.||.|||||||||||||||||||||||||||||
RBAM_019030__    151 TTCTCCAAAAAGAAAGTGCGCGTATTTCTTCCATATAAAACAATTGAAAG    200

BSNT_03143___    201 CTTTGCCATTCAAGAAGCGGGAATGTTTGATCCGGACACTGGGCTTTTAT    250
                     |||.|||||||||||||||||.|||||||||||.||.||.||||||.|||
RBAM_019030__    201 CTTCGCCATTCAAGAAGCGGGGATGTTTGATCCCGATACCGGGCTTGTAT    250

BSNT_03143___    251 TGATGACAAGAAGCAAAACGTTCGAATTAGAATTTGCGAAAGACACCGAT    300
                     |.||||||||..|.|||||.||||||||.||||||||.|||||.||.||.
RBAM_019030__    251 TAATGACAAGGGGAAAAACTTTCGAATTGGAATTTGCAAAAGAAACGGAC    300

BSNT_03143___    301 TTAAGCGAGGTTCAGGCGGTGCTGACAAAGCATTTGTGCAGCTGA    345
                     ||.|..||||||||.||..|..|.|||||..|.||.|||||.|.|
RBAM_019030__    301 TTGACTGAGGTTCAAGCCATCTTAACAAAATACTTATGCAGTTAA    345


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