Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03117 and RBAM_018910

See Amino acid alignment / Visit BSNT_03117 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:58
# Commandline: needle
#    -asequence dna-align/BSNT_03117___yozB.1.9828.seq
#    -bsequence dna-align/RBAM_018910___yozB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03117___yozB-RBAM_018910___yozB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03117___yozB-RBAM_018910___yozB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03117___yozB
# 2: RBAM_018910___yozB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 541
# Identity:     439/541 (81.1%)
# Similarity:   439/541 (81.1%)
# Gaps:           8/541 ( 1.5%)
# Score: 1777.0
# 
#
#=======================================

BSNT_03117___      1 ATGAACCAAACAGAAAATAAACCGAAAAATTACACGGGGATTGTCCTTAC     50
                     |||||.||.||||||||.|||||.||||.|||.||.||.||.||.||.||
RBAM_018910__      1 ATGAATCAGACAGAAAACAAACCTAAAAGTTATACCGGTATCGTGCTGAC     50

BSNT_03117___     51 GCTGACAGTTCTGATTAACGGTTTAATCGCAGTGCTGTTTTTTATGCCTA    100
                     ..||||.||||||||.|||||.|||||.||.|||||||||||||||||.|
RBAM_018910__     51 ATTGACCGTTCTGATCAACGGGTTAATTGCGGTGCTGTTTTTTATGCCGA    100

BSNT_03117___    101 AATTAGATCAGTTCAGCCATGCGAATATTCACATTTTGCCAATGCTGAAT    150
                     |||..|..|||.|||||..|||.||||||||.|||.||||.|||.|.|||
RBAM_018910__    101 AATCGGGACAGGTCAGCATTGCCAATATTCATATTCTGCCGATGTTAAAT    150

BSNT_03117___    151 GCGATATTCAACAGCTTTACGTTTATCTTCTTATTGGCCGCGCTGATTAT    200
                     ||.||.||.|||||||||||.||||||||.||..||||.|||||..||||
RBAM_018910__    151 GCCATTTTTAACAGCTTTACTTTTATCTTTTTGCTGGCAGCGCTCTTTAT    200

BSNT_03117___    201 GATTAAACAGAAAAATATCAAAGCTCACAAACGCTTTATTTTGGCCGCGT    250
                     ||||||.||.||||||||..||||.||.|||||.|||||||||||.||||
RBAM_018910__    201 GATTAAGCAAAAAAATATTCAAGCGCATAAACGTTTTATTTTGGCGGCGT    250

BSNT_03117___    251 TCACAACAACATTACTATTTTTGATTTGCTATGTGACG--TACCACTCGA    298
                     |.||.||.||.||.||.||||||||.||||||||  ||  ||||||||..
RBAM_018910__    251 TTACGACGACTTTGCTGTTTTTGATCTGCTATGT--CGTATACCACTCTG    298

BSNT_03117___    299 TTGCGGAAAACACGCTCTAT--GGCGGAGAAGGTATTATGCGCCCGATTT    346
                     |.||.|||||.|  ||.|||  |||||..|.|||||.||.||...|||||
RBAM_018910__    299 TGGCTGAAAATA--CTTTATTCGGCGGCCACGGTATCATTCGGGGGATTT    346

BSNT_03117___    347 ATTTCTTTATTTTAATTACACATATCTGCCTTTCTGCAATTATTGTGCCG    396
                     |||||||||||||||||||.||.|||||.|||||.||..||||.||||||
RBAM_018910__    347 ATTTCTTTATTTTAATTACGCACATCTGTCTTTCCGCCGTTATCGTGCCG    396

BSNT_03117___    397 CTTGCGCTGTTTACGCTGATCAGAGGCTTCAGCATGCAGGTGGAGCGCCA    446
                     ||||||||||||||||||||||||||.|||||||||||.|||||||||||
RBAM_018910__    397 CTTGCGCTGTTTACGCTGATCAGAGGATTCAGCATGCAAGTGGAGCGCCA    446

BSNT_03117___    447 CAAAAAAATTGCGAGATGGACAATGCCTCTATGGCTGTATGTAAGCCTTA    496
                     |||||||||.|||||||||||.|||||.||.|||||||||||.||.||.|
RBAM_018910__    447 CAAAAAAATCGCGAGATGGACGATGCCGCTCTGGCTGTATGTCAGTCTGA    496

BSNT_03117___    497 CAGGCGTTATTGTATATTTGATGATTTCACCGTATTACTAA    537
                     |.||.||.||||||||.||.|||||.|||||||||||.|||
RBAM_018910__    497 CGGGTGTCATTGTATACTTAATGATCTCACCGTATTATTAA    537


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