Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03050 and RBAM_018540
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:55
# Commandline: needle
# -asequence dna-align/BSNT_03050___ggt.1.9828.seq
# -bsequence dna-align/RBAM_018540___ggt.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03050___ggt-RBAM_018540___ggt.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03050___ggt-RBAM_018540___ggt.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03050___ggt
# 2: RBAM_018540___ggt
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1793
# Identity: 1378/1793 (76.9%)
# Similarity: 1378/1793 (76.9%)
# Gaps: 46/1793 ( 2.6%)
# Score: 5223.0
#
#
#=======================================
BSNT_03050___ 1 ATGAAA---AGAACGT---GGAACGTCTGTTTAACAGCTCTGCTTAGT-- 42
|||||| |.||.|| .|||..|||||||.|..|.||||||.|||
RBAM_018540__ 1 ATGAAAAAGAAAAAGTTTATGAATCTCTGTTTTATCGTTCTGCTCAGTAC 50
BSNT_03050___ 43 GTTCTGTTAGTCGCTGGAAGTGTCCCTTTTCACGCGGAAGCTAAAAAACC 92
|| ||.|.|..||.|||||..||||||.|||.||..|.|||||.||||.
RBAM_018540__ 51 GT--TGCTCGCGGCCGGAAGCATCCCTTATCATGCTCAGGCTAAGAAACA 98
BSNT_03050___ 93 GCCCAAAAG-----CTACGATGAGTACAAACAAGTAGATGTTGGAAAAGA 137
.|| | |||.||.||.||||||||.||||||||.||.|||||
RBAM_018540__ 99 CCC-----GTTTTCCTATGACGACTACAAACAGGTAGATGTCGGCAAAGA 143
BSNT_03050___ 138 CGGCATGGTTGCGACCGCACATGCTCTTGCTTCTGAAATCGGTGCTGATG 187
||||||||||||.|||||.|||.||||.|||||..||||||||||.||.|
RBAM_018540__ 144 CGGCATGGTTGCCACCGCCCATCCTCTCGCTTCGCAAATCGGTGCAGACG 193
BSNT_03050___ 188 TGCTGAAAAAAGGAGGAAATGCTATTGACGCAGCGGTTGCCATTCAATTT 237
|||||||||||||.||.|||||.||||||||.|||||||||||||||||.
RBAM_018540__ 194 TGCTGAAAAAAGGCGGCAATGCAATTGACGCCGCGGTTGCCATTCAATTC 243
BSNT_03050___ 238 GCACTCAATGTAACAGAGCCGATGATGTCAGGTATTGGCGGCGGCGGTTT 287
|||.|.||.|||||.||.||.||||||||.||.||.|||||||||||.||
RBAM_018540__ 244 GCATTAAACGTAACTGAACCTATGATGTCGGGAATCGGCGGCGGCGGATT 293
BSNT_03050___ 288 TATGATGGTGTATGACGGAAAAACGAAGGATACAACGATAATCGACAGCC 337
|||||||||.|||||.|..||.|||||.||.||.||.||.||||||||||
RBAM_018540__ 294 TATGATGGTTTATGATGCGAAGACGAAAGACACCACCATTATCGACAGCC 343
BSNT_03050___ 338 GTGAGCGTGCTCCAGCAGGCGCAACTCCTGATATGTTTCTGGACGAAAAC 387
|.||.||.||.||.|||||||||||.||.||||||||.||.|||||||||
RBAM_018540__ 344 GGGAACGCGCACCGGCAGGCGCAACACCGGATATGTTCCTTGACGAAAAC 393
BSNT_03050___ 388 GGCAAAGCAATTCCTTTCTCTGAACGTGTAACAAAAGGTACTGCCGTTGG 437
||||||||.|||||||||||.|||||.||.||.|||||.|||||.||.||
RBAM_018540__ 394 GGCAAAGCCATTCCTTTCTCCGAACGCGTTACGAAAGGGACTGCAGTCGG 443
BSNT_03050___ 438 TGTTCCAGGCACTCTGAAAGGGCTGGAAGAAGCCTTGGACAAATGGGGAA 487
||||||.||.||..|.|||||.||.|||.||||..|.|||||||||||.|
RBAM_018540__ 444 TGTTCCGGGAACATTAAAAGGACTAGAAAAAGCGCTCGACAAATGGGGCA 493
BSNT_03050___ 488 CCCGTTCGATGAAGCTATTAATTACCCCTTCTATTAAACTCGCTGAAAAA 537
|.||.||.|||||.|.|.|.||.||||||||.||||||||.||...||||
RBAM_018540__ 494 CACGCTCCATGAAACAACTCATCACCCCTTCCATTAAACTTGCCTCAAAA 543
BSNT_03050___ 538 GGCTTTCCGATTGATTCGGTGTTGGCAGATGCCATTTCTGATTATCAGGA 587
|||||||||||.||||||||.||.||.||||||||.||.||||||.|.||
RBAM_018540__ 544 GGCTTTCCGATCGATTCGGTTTTAGCTGATGCCATCTCAGATTATAAAGA 593
BSNT_03050___ 588 AAAACTTTCACGGACTGCCGCAAAAGATGTATTTTTACCAAATGGCGAAC 637
.||..|.||||..|||||.||||||||.||.|||.|.||..|.||.||||
RBAM_018540__ 594 CAAGTTATCACACACTGCTGCAAAAGACGTGTTTCTTCCGGACGGAGAAC 643
BSNT_03050___ 638 CGCTTAAAGAAGGAGATACCCTTATTCAAAAGGATTTGGCTAAAACATTT 687
|.||.|||||||||||.||.||.||.|||||.||.||.||.|||||||||
RBAM_018540__ 644 CTCTGAAAGAAGGAGACACACTCATCCAAAAAGACTTAGCCAAAACATTT 693
BSNT_03050___ 688 A-AGCTTATTCGCTCCAAAGGCACTGACGCTTTTTATAAAGGAAAATTCG 736
| ||| ||||...|.|||||||||..|.||.||.|||.|.|||..||||.
RBAM_018540__ 694 ACAGC-TATTAAGTACAAAGGCACAAAAGCATTCTATGACGGAGCATTCT 742
BSNT_03050___ 737 CCAAGACGCTTTCTGACACTGTCCAGGATTTCGGCGGATCAATGACAGAA 786
||||.|.||||.|.||.||.||.|||||.||||||||.||||||||||||
RBAM_018540__ 743 CCAAAAAGCTTGCGGAAACAGTGCAGGAATTCGGCGGCTCAATGACAGAA 792
BSNT_03050___ 787 AAAGA-TTTAGAAAATTACGACATTACAATTGATGAACCGATTTGGGGAG 835
||||| .||| ||||.|.|.|..|.||.|||||.||||||||.|||||||
RBAM_018540__ 793 AAAGACATTA-AAAACTTCAATGTGACGATTGACGAACCGATCTGGGGAG 841
BSNT_03050___ 836 ACTATCAAGGCTATCAAATCGCTACTACTCCTCCTCCAAGCTCCGGCGGT 885
|.||.||.||||||||.|||||.|||.||||||||||||||||.||||||
RBAM_018540__ 842 ATTACCAGGGCTATCATATCGCAACTGCTCCTCCTCCAAGCTCGGGCGGT 891
BSNT_03050___ 886 ATTTTCTTATTGCAAATGCTGAAAATCCTTGATGATTTTAACCTTTCACA 935
.|||||.|.||||||||||||||..||.|.|||||||||||.|||||.||
RBAM_018540__ 892 GTTTTCCTGTTGCAAATGCTGAACCTCTTGGATGATTTTAAGCTTTCTCA 941
BSNT_03050___ 936 ATACGATGTCCGCTCATGGGAAAAATATCAGCTGCTTGCTGAAACGATGC 985
|||.|||.||||.||.|||.|||||||||||||.||.||.||||||||||
RBAM_018540__ 942 ATATGATATCCGTTCTTGGCAAAAATATCAGCTTCTCGCAGAAACGATGC 991
BSNT_03050___ 986 ATTTGTCATATGCCGACCGTGCGTCTTACGCAGGTGATCCCGAATTTGTA 1035
|||||.|.|||||.|||||.||..|.|..||.||.||.||.|||||.||.
RBAM_018540__ 992 ATTTGGCTTATGCTGACCGCGCCGCATTTGCCGGGGACCCAGAATTCGTC 1041
BSNT_03050___ 1036 AATGTTCCTCTCAAAGGCCTGCTT-CACCCCGATTATATTAAAGAACGC- 1083
||..|.|||||||||||||| ||| .|.||.||||||||.||.|..|||
RBAM_018540__ 1042 AACATCCCTCTCAAAGGCCT-CTTGAATCCAGATTATATCAATGCCCGCA 1090
BSNT_03050___ 1084 --CAGCAATTAATCAACCTAGATCAAGTGAATAAAAAACCGAAAGCCGGT 1131
|||| |.||..|..|.|||.||||.||||||||||||||||||||.
RBAM_018540__ 1091 GACAGC---TGATAGATATTGATAAAGTCAATAAAAAACCGAAAGCCGGC 1137
BSNT_03050___ 1132 GACCCTTGGAAATACCAAGAAGGATCAGCAAACTATAAACAAGTTGAACA 1181
|||||||||...||.||.|||||.||.|||||||||||||||||.||.||
RBAM_018540__ 1138 GACCCTTGGGCCTATCAGGAAGGTTCTGCAAACTATAAACAAGTGGAGCA 1187
BSNT_03050___ 1182 GCCGAAAGACAAAGTAGAAGGCCAAACAACCCACTTTACAGTTGCTGATC 1231
|||||..||||||..||||||||||||.||.|||||.||.||..||||||
RBAM_018540__ 1188 GCCGACTGACAAACAAGAAGGCCAAACGACTCACTTCACTGTAACTGATC 1237
BSNT_03050___ 1232 GATGGGGAAATGTTGTTTCTTACACAACAACAATCGAACAGCTATTCGGA 1281
|.|..||.|||||.||.|||||.||.||||||||.||||||||.|||||.
RBAM_018540__ 1238 GCTTCGGCAATGTCGTATCTTATACGACAACAATTGAACAGCTGTTCGGT 1287
BSNT_03050___ 1282 ACGGGTATTATGG-TCCCTGATTACGGTGTTATTTTAAACAATGAATTAA 1330
.|.||.||||||| ||||.|| |||||.|||.|.||.||.|||||.||||
RBAM_018540__ 1288 TCCGGCATTATGGTTCCCGGA-TACGGCGTTGTGTTGAATAATGAGTTAA 1336
BSNT_03050___ 1331 CGGATTTTGATGCGATACCAGGCGGAGCTAACGAAGTACAGCCAAACAAA 1380
|.||.||.||||||.|.||.|||||.||.||.|||||.|||||.||.|||
RBAM_018540__ 1337 CAGACTTCGATGCGGTGCCTGGCGGCGCAAATGAAGTGCAGCCGAATAAA 1386
BSNT_03050___ 1381 CGGCCTTTAAGCAGCATGACCCCGACGATTTTATTTAAGGATGACAAGCC 1430
||.||..|.|||||||||||.|||||.|||||||||||..||.||.|.||
RBAM_018540__ 1387 CGTCCGCTCAGCAGCATGACTCCGACTATTTTATTTAAAAATAACGAACC 1436
BSNT_03050___ 1431 TGTCCTCACTGTTGGATCTCCTGGCGGGGCCACAATTATTTCATCCGTTT 1480
||||||.|||||.||.||.||.|||||.||.||.||||||||.|||||..
RBAM_018540__ 1437 TGTCCTGACTGTCGGCTCCCCCGGCGGAGCAACGATTATTTCTTCCGTCC 1486
BSNT_03050___ 1481 TGCAAACCATTCTCTACCACATTGAATATGGTATGGAATTAAAAGCAGCT 1530
|||||||.||.||..||.|..||||.||.||.|||||..|.|||||.||.
RBAM_018540__ 1487 TGCAAACGATCCTGAACAAAGTTGAGTACGGCATGGATCTGAAAGCGGCG 1536
BSNT_03050___ 1531 GTTGAAGAGCCGAGAATTTACACAAACAGTATGAGCTCTTACCGTTACGA 1580
||.||||||||||||||||||||||||||.||||..||.||.||.||.||
RBAM_018540__ 1537 GTCGAAGAGCCGAGAATTTACACAAACAGCATGACATCCTATCGATATGA 1586
BSNT_03050___ 1581 AGACGGAGTTCCTAAAGATGTCCTCAGCAAGCTGAACGGTATGGGCCACA 1630
|.|.|||||.||..||||.|.||.||..||.|||||||..|||||.||.|
RBAM_018540__ 1587 AAAAGGAGTGCCGGAAGAAGCCCGCACAAAACTGAACGAAATGGGGCATA 1636
BSNT_03050___ 1631 AATTCGGCACAAGTCCGGTGGATATCGGAAACGTGCAAAGCATATCGATC 1680
|||||||||..||.|||||.||||||||.||.|||||||||||...|||.
RBAM_018540__ 1637 AATTCGGCAGCAGCCCGGTTGATATCGGGAATGTGCAAAGCATCCTGATT 1686
BSNT_03050___ 1681 GACCATGAAAACGGAACCTTTAAAGGCGTAGCTGATTCAAGCAGAAACGG 1730
||||.|||||||||.|||||.|..||.||.||.||.||||||.|||||||
RBAM_018540__ 1687 GACCGTGAAAACGGCACCTTCACCGGAGTTGCCGACTCAAGCCGAAACGG 1736
BSNT_03050___ 1731 CGCGGCGATCGGCATTAATTTAAAACGTAAAT---AA------ 1764
.||.||.||||||.|.||.||.||| |||| ||
RBAM_018540__ 1737 AGCCGCAATCGGCGTAAACTTGAAA---AAATGCGAAAAATGA 1776
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Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.