Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02984 and RBAM_017850
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:50
# Commandline: needle
# -asequence dna-align/BSNT_02984.1.9828.seq
# -bsequence dna-align/RBAM_017850___yneP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02984-RBAM_017850___yneP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02984-RBAM_017850___yneP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02984
# 2: RBAM_017850___yneP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 420
# Identity: 342/420 (81.4%)
# Similarity: 342/420 (81.4%)
# Gaps: 6/420 ( 1.4%)
# Score: 1371.5
#
#
#=======================================
BSNT_02984 1 TTGCATGTATCAAAAAAAGAAATAGAAGTGCGTTATGCAGAAACAGATCA 50
||||||||.|||||||||||||||||||||||||||||.|||||||||||
RBAM_017850__ 1 TTGCATGTGTCAAAAAAAGAAATAGAAGTGCGTTATGCGGAAACAGATCA 50
BSNT_02984 51 AATGGGGATTGTCTATCACGCAAATTATCTT-GTGTGGATGGAGGTCGGC 99
||||||.||.||||||||.||.||||| ||| ||.|||||||||||||||
RBAM_017850__ 51 AATGGGCATCGTCTATCATGCCAATTA-CTTAGTCTGGATGGAGGTCGGC 99
BSNT_02984 100 AGAACGGCCTTGATTAAGGACTTAGGCTT--TTTATATAGTGATATGGAA 147
||||||||..||||||||||..|.||.|| ||||.| || |||||||||
RBAM_017850__ 100 AGAACGGCGCTGATTAAGGAACTCGGATTCCTTTACA-AG-GATATGGAA 147
BSNT_02984 148 AAAAAAGGCATTCTGTCCCCAGTCGTTGATATCAATATTTCCTATAAAAA 197
.|.|.|||..|.||||||||.||..|.|||||||..|||||.||||||||
RBAM_017850__ 148 GATAGAGGAGTGCTGTCCCCTGTATTGGATATCAGCATTTCTTATAAAAA 197
BSNT_02984 198 GCCGCTTCATTACGGAGAAACCGCGGTTGTACATACATGGATAGAGGAAT 247
|||.||.|..|||||||||||.||.||.||||||||.|||||.||.||||
RBAM_017850__ 198 GCCACTCCGCTACGGAGAAACGGCTGTCGTACATACTTGGATTGAAGAAT 247
BSNT_02984 248 ATAACGGCTTTAAAACCGTCTATGGTTATCACATTTATAATCCGGCCGGT 297
.||||||.|||||||||||.||.||.||.|||||.||||||||||.....
RBAM_017850__ 248 CTAACGGATTTAAAACCGTTTACGGCTACCACATCTATAATCCGGATCAA 297
BSNT_02984 298 GAGCTTTCCATCAAAGCCACCTCATCTCATATTTGTGTGGATAAAGAAAG 347
||.|||.||||||||||.||.||.||||||||.||.||.||||||||.||
RBAM_017850__ 298 GAACTTGCCATCAAAGCGACATCCTCTCATATATGCGTTGATAAAGAGAG 347
BSNT_02984 348 CTTTAAGCCAATTCAATTCCGCAAAGCTTTTCCTGATTGGCACACATCAT 397
|||.||.||.|||||.||.|||||.|||||||||||||||||..|..|.|
RBAM_017850__ 348 CTTCAAACCGATTCAGTTTCGCAAGGCTTTTCCTGATTGGCATGCCGCTT 397
BSNT_02984 398 ATGAAAAGGCCAAAAAATAG 417
|.||||||||.||||||||.
RBAM_017850__ 398 ACGAAAAGGCAAAAAAATAA 417
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