Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02973 and RBAM_017780

See Amino acid alignment / Visit BSNT_02973 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:49
# Commandline: needle
#    -asequence dna-align/BSNT_02973___sspP.1.9828.seq
#    -bsequence dna-align/RBAM_017780___sspP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02973___sspP-RBAM_017780___sspP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02973___sspP-RBAM_017780___sspP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02973___sspP
# 2: RBAM_017780___sspP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity:     124/147 (84.4%)
# Similarity:   124/147 (84.4%)
# Gaps:           0/147 ( 0.0%)
# Score: 528.0
# 
#
#=======================================

BSNT_02973___      1 ATGACCAATAAGAATACAAGTAAAGATATGCATAAAAACGCCCCTAAAGG     50
                     |||||.|||||.|||||.||||||||||||||||||||.||.||.||.||
RBAM_017780__      1 ATGACAAATAAAAATACGAGTAAAGATATGCATAAAAATGCTCCGAAGGG     50

BSNT_02973___     51 ACACAATCCCGGCCAACCTGAGCCTCTAAGCGGAAGCAAAAAAGTAAAGA    100
                     .||.||.||||||||.||.||.||.||.|||||||||||||||||.||.|
RBAM_017780__     51 CCATAACCCCGGCCAGCCGGAACCGCTGAGCGGAAGCAAAAAAGTGAAAA    100

BSNT_02973___    101 ACCGAAACCATACAAGACAAAAGCACAACTCAAGCCATGATATGTAA    147
                     ||||.|||||||||||||||||.||.||..|||||||.|||||||||
RBAM_017780__    101 ACCGCAACCATACAAGACAAAAACATAATACAAGCCACGATATGTAA    147


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