Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02958 and RBAM_017670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:48
# Commandline: needle
# -asequence dna-align/BSNT_02958___yneB.1.9828.seq
# -bsequence dna-align/RBAM_017670___yneB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02958___yneB-RBAM_017670___yneB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02958___yneB-RBAM_017670___yneB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02958___yneB
# 2: RBAM_017670___yneB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 659
# Identity: 501/659 (76.0%)
# Similarity: 501/659 (76.0%)
# Gaps: 13/659 ( 2.0%)
# Score: 1882.5
#
#
#=======================================
BSNT_02958___ 1 ATGAAAGCACTCATTTATGCCCGTGTAAGCACAAATAAAGAACAGCAGGA 50
|||||.||.||||||||||||||.|||||||||||.||||||||||||.|
RBAM_017670__ 1 ATGAAGGCGCTCATTTATGCCCGCGTAAGCACAAACAAAGAACAGCAGCA 50
BSNT_02958___ 51 AACGTCATTAAAGCGGCAGGAGGAGGAGCTTACGGCCATTGCAGCGGAGA 100
||||||||||||..|.|||||.||||||||.|..|..||.||.||.|..|
RBAM_017670__ 51 AACGTCATTAAAAAGACAGGAAGAGGAGCTCAGTGAGATCGCTGCTGCAA 100
BSNT_02958___ 101 ACGACATGGAAGTGGTCAAAGTGATTTCAGAAAAAGCCAGCGGATATGAA 150
|||.|||||||||.||.|||||.|||||.||.|||||||||||.||.|||
RBAM_017670__ 101 ACGGCATGGAAGTCGTGAAAGTCATTTCTGAGAAAGCCAGCGGTTACGAA 150
BSNT_02958___ 151 ATGGATCGGGATGGTGTATTTGAGCTGCTTGATGAGATTAAGAACGCTGG 200
|||||.||.||.||.||||||||..||||||||||.|||||.||..|...
RBAM_017670__ 151 ATGGACCGCGACGGAGTATTTGAAATGCTTGATGAAATTAAAAAATCACA 200
BSNT_02958___ 201 AATTGATGTCATTTTGGTTCAGGATGAGACAAGGCTCGGACGGGGAAACG 250
.|||||.|..||.|||||.|||||.||.||.||..|.|||.|.|||||||
RBAM_017670__ 201 TATTGACGCGATATTGGTGCAGGACGAAACGAGATTGGGAAGAGGAAACG 250
BSNT_02958___ 251 CAAAAATCGCACTGCTTCATTGCATTTATA--GAGAAGGTGTGAAAGTCT 298
|.||.||.||.||..|.|||||||||||.| ||||| .||.|||.|.|
RBAM_017670__ 251 CCAAGATTGCGCTTTTGCATTGCATTTACAGGGAGAA--CGTAAAAATAT 298
BSNT_02958___ 299 ATACAACGGCTCATAGAGGTGAACTGGAGTTATCGGAGGCTGACTCAATG 348
||||.||||||||||.|||||||||||||.|.||.||.|||||.||.|||
RBAM_017670__ 299 ATACGACGGCTCATAAAGGTGAACTGGAGCTTTCCGAAGCTGATTCGATG 348
BSNT_02958___ 349 GTCTTGGAAATCGTCAGCATTGTGGAAGAGTATCAGCGAAAGATTCACAA 398
||..|.|||||||||||.|||||.||.||.|||||..|.||.||||||||
RBAM_017670__ 349 GTACTCGAAATCGTCAGTATTGTTGAGGAATATCAAAGGAAAATTCACAA 398
BSNT_02958___ 399 CATGAAAATCAGACGGGGAATGAAACGTGCAGTAAAAAACGGTTTTAAAC 448
.|||||||||.|.||||||||||||.|.||.||.||||||||.|..||||
RBAM_017670__ 399 TATGAAAATCCGGCGGGGAATGAAAAGAGCCGTGAAAAACGGCTACAAAC 448
BSNT_02958___ 449 CGCAAAAAAACTTAAAAAACCAACATGGGAACAGTGGAAAAGAAAAAATA 498
|..||...||..|.||||||..|||||..|||||.|||||||||||||.|
RBAM_017670__ 449 CTGAACGGAATCTGAAAAACAGACATGAAAACAGCGGAAAAGAAAAAAAA 498
BSNT_02958___ 499 GAGGTGCCAATCTCTGAGATCGTCCGCCTAAGAGCGAATAAACTGACGTT 548
|||||.||..|.||.||.||..||.|.||.|||||.||.||.||.||.||
RBAM_017670__ 499 GAGGTTCCGGTTTCGGAAATTATCAGGCTGAGAGCCAACAAGCTTACCTT 548
BSNT_02958___ 549 TGCTGAAATCGCGGCTACCCTAAGAGGGTTTGGCTATGATGTCTCTAAAG 598
|||.||||||||.||.|||.||||.||.||.|||||.|||||.||.||||
RBAM_017670__ 549 TGCAGAAATCGCAGCGACCTTAAGGGGATTCGGCTACGATGTGTCCAAAG 598
BSNT_02958___ 599 CAACCGTTCACCGGCGTTTTCAGGAATA---CATAGAGAATGAAGAGACA 645
|.||.|||||||||||.||||||||||| |..|||.|..|| ||.||
RBAM_017670__ 599 CCACGGTTCACCGGCGGTTTCAGGAATATACCGCAGACACAGA--AGGCA 646
BSNT_02958___ 646 GCAGAGTGA 654
||.||
RBAM_017670__ 647 GCTGA---- 651
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