Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02904 and RBAM_017350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence dna-align/BSNT_02904___xylA.1.9828.seq
# -bsequence dna-align/RBAM_017350___xylA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02904___xylA-RBAM_017350___xylA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02904___xylA-RBAM_017350___xylA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02904___xylA
# 2: RBAM_017350___xylA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1339
# Identity: 1218/1339 (91.0%)
# Similarity: 1218/1339 (91.0%)
# Gaps: 2/1339 ( 0.1%)
# Score: 5594.0
#
#
#=======================================
BSNT_02904___ 1 ATGGCTCAATCTCATTCCAGTTCAATTAACTATTTTGGAAGCGCAAACAA 50
||||||||.|||||||||.||||..|.||||||||||.||||||||||||
RBAM_017350__ 1 ATGGCTCACTCTCATTCCGGTTCGGTCAACTATTTTGAAAGCGCAAACAA 50
BSNT_02904___ 51 AGTGGTTTACGAAGGGAAAGATTCGACTAATCCTTTAGCATTTAAATATT 100
||||.||||||||||||||||.||.||.||||||||||||||||||||.|
RBAM_017350__ 51 AGTGATTTACGAAGGGAAAGAATCCACGAATCCTTTAGCATTTAAATACT 100
BSNT_02904___ 101 ATAATCCTCAAGAAGTAATCGGCGGAAAAACGATGAAAGAGCATTTGCGA 150
|||||.|||||||||||||.||||||||||||||||||||||||||||||
RBAM_017350__ 101 ATAATTCTCAAGAAGTAATTGGCGGAAAAACGATGAAAGAGCATTTGCGA 150
BSNT_02904___ 151 TTTTCTATTGCCTATTGGCATACATTTACTGCTGATGGTACGGACGTTTT 200
|||||||||||||||||||||||||||||.|||||.||.||.|||.||||
RBAM_017350__ 151 TTTTCTATTGCCTATTGGCATACATTTACCGCTGACGGCACAGACATTTT 200
BSNT_02904___ 201 TGGATCAGCTACGATGCAAAGACCATGGGATCACTATAAAGGCATGGATC 250
|||..|||||||||||||.|||||.|||||||||||||||||||||||||
RBAM_017350__ 201 TGGCGCAGCTACGATGCAGAGACCGTGGGATCACTATAAAGGCATGGATC 250
BSNT_02904___ 251 TAGCGAAGA-TGAGAGTAGAAGCAGCATTTGAGATGTTTGAAATACTAGA 299
|.||| ||| .|||.|||||.|||||.||||||.|||||||||.|||.||
RBAM_017350__ 251 TGGCG-AGAGCGAGGGTAGATGCAGCGTTTGAGCTGTTTGAAAAACTGGA 299
BSNT_02904___ 300 TGCACCATTCTTTGCTTTTCATGACCGGGATATTGCACCAGAAGGCAGTA 349
|||.|||||.|||||||||||||||||||||||.|||||.|||||.||||
RBAM_017350__ 300 TGCGCCATTTTTTGCTTTTCATGACCGGGATATCGCACCGGAAGGAAGTA 349
BSNT_02904___ 350 CGCTAAAAGAGACAAACCAAAATTTAGATATGATCGTGGGCATGATTAAA 399
||.|||||||||||||.||||||.|.|||.|.|||||||..|||||.|||
RBAM_017350__ 350 CGTTAAAAGAGACAAATCAAAATCTGGATTTAATCGTGGATATGATAAAA 399
BSNT_02904___ 400 GATTACATGAGAAATAGCGGCGTTAAGCTATTATGGAATACCGCAAACAT 449
||.||||||||||..||||||||||||.|||||||||||||.||||||||
RBAM_017350__ 400 GACTACATGAGAACCAGCGGCGTTAAGTTATTATGGAATACTGCAAACAT 449
BSNT_02904___ 450 GTTTACGAATCCCCGTTTCGTCCATGGTGCCGCGACTTCTTGCAATGCAG 499
||||||||||||||||||||||||||||||.|||||||||||.||.||||
RBAM_017350__ 450 GTTTACGAATCCCCGTTTCGTCCATGGTGCGGCGACTTCTTGTAACGCAG 499
BSNT_02904___ 500 ATGTGTTTGCGTATGCTGCAGCACAAGTGAAAAAAGGGTTAGAAACAGCA 549
||||.|||||||||||.|||||.|||||.||||||||.||||||||||||
RBAM_017350__ 500 ATGTATTTGCGTATGCCGCAGCCCAAGTAAAAAAAGGATTAGAAACAGCA 549
BSNT_02904___ 550 AAAGAGCTTGGCGCTGAGAACTATGTATTTTGGGGCGGCCGTGAAGGATA 599
||||||||||||||.|||||||||||||||||||||||.||||||||.||
RBAM_017350__ 550 AAAGAGCTTGGCGCGGAGAACTATGTATTTTGGGGCGGACGTGAAGGGTA 599
BSNT_02904___ 600 TGAAACATTGTTAAATACCGATTTAAAATTTGAGCTTGATAATTTGGCTA 649
.|||||.||||||||||||||||||||||||||||||||||||.||||.|
RBAM_017350__ 600 CGAAACTTTGTTAAATACCGATTTAAAATTTGAGCTTGATAATATGGCCA 649
BSNT_02904___ 650 GATTTATGCATATGGCAGTGGATTATGCGAAGGAAATCGGGTACACAGGG 699
|||||||||||||||||||||||||||||||||||||||||||.||||||
RBAM_017350__ 650 GATTTATGCATATGGCAGTGGATTATGCGAAGGAAATCGGGTATACAGGG 699
BSNT_02904___ 700 CAGTTTTTGATTGAGCCAAAACCAAAAGAGCCGACCACCCATCAATACGA 749
||||||||||||||.||||||||||||||||||||||||||||||||.||
RBAM_017350__ 700 CAGTTTTTGATTGAACCAAAACCAAAAGAGCCGACCACCCATCAATATGA 749
BSNT_02904___ 750 TACAGATGCAGCAACAACCATTGCCTTTTTGAAGCAATATGGCTTAGACA 799
|||.||.|||||||||||.|||||||||||.|||||||||||||||||||
RBAM_017350__ 750 TACGGACGCAGCAACAACTATTGCCTTTTTAAAGCAATATGGCTTAGACA 799
BSNT_02904___ 800 ATCATTTTAAATTAAATCTTGAAGCCAATCATGCCACATTAGCCGGGCAT 849
|||||||||||||||||||.||||||||||||||||||||||||||||||
RBAM_017350__ 800 ATCATTTTAAATTAAATCTCGAAGCCAATCATGCCACATTAGCCGGGCAT 849
BSNT_02904___ 850 ACATTCGAACATGAATTACGCATGGCAAGAGTACATGGTCTGCTTGGCTC 899
||||||||||||||||||||||||||.|||||.|||||.||.||||||||
RBAM_017350__ 850 ACATTCGAACATGAATTACGCATGGCGAGAGTGCATGGCCTTCTTGGCTC 899
BSNT_02904___ 900 TGTTGACGCAAACCAGGGTCATCCTCTTTTAGGCTGGGACACGGATGAAT 949
|||||||||.||.||||||.||||.|||||||||||||||||.|||||||
RBAM_017350__ 900 TGTTGACGCGAATCAGGGTGATCCGCTTTTAGGCTGGGACACAGATGAAT 949
BSNT_02904___ 950 TTCCGACGGATTTATATTCTACGACATTAGCAATGTACGAAATCCTGCAA 999
|||||||.||||||||||||.||||||||||||||||||||||||||.||
RBAM_017350__ 950 TTCCGACAGATTTATATTCTGCGACATTAGCAATGTACGAAATCCTGAAA 999
BSNT_02904___ 1000 AATGGCGGCCTAGGAAGCGGCGGATTAAACTTTGATGCGAAGGTCAGAAG 1049
||||||||.||.||||||||.||||||||||||||.||.||||||||.||
RBAM_017350__ 1000 AATGGCGGTCTTGGAAGCGGAGGATTAAACTTTGACGCAAAGGTCAGGAG 1049
BSNT_02904___ 1050 ATCTTCTTTTGAGCCTGATGATCTAATATATGCCCATATTGCAGGGATGG 1099
||||||||||||||||||||||.||.|||||||||||.||||||||||||
RBAM_017350__ 1050 ATCTTCTTTTGAGCCTGATGATTTACTATATGCCCATGTTGCAGGGATGG 1099
BSNT_02904___ 1100 ATGCATTTGCAAGAGGATTGAAAGTTGCCCACAAATTAATCGAAGATCGT 1149
||.|||||||||||||||||||||..||||.|||||||||||||||||||
RBAM_017350__ 1100 ATACATTTGCAAGAGGATTGAAAGCCGCCCGCAAATTAATCGAAGATCGT 1149
BSNT_02904___ 1150 GTGTTTGAAGATGTGATTCAACATCGTTACCGCAGCTTTACTGAAGGGAT 1199
|||||||||||||||||||||||.||||||||||||||||||||||||||
RBAM_017350__ 1150 GTGTTTGAAGATGTGATTCAACACCGTTACCGCAGCTTTACTGAAGGGAT 1199
BSNT_02904___ 1200 TGGTCTTGAAATTATAGAAGGAAGAGCTAATTTTCACACACTTGAGCAAT 1249
|||.|||||||||..|||||||||||||.|||||.|.|||||||||||||
RBAM_017350__ 1200 TGGGCTTGAAATTGCAGAAGGAAGAGCTGATTTTAAGACACTTGAGCAAT 1249
BSNT_02904___ 1250 ATGCGCTAAATCATAAATTAATTAAAAACGAATCTGGAAGACAGGAGAAA 1299
|||||||.||..||.|...|||||||||||||||.||.|||||||||...
RBAM_017350__ 1250 ATGCGCTGAACAATCAGCCAATTAAAAACGAATCAGGTAGACAGGAGCGG 1299
BSNT_02904___ 1300 TTAAAAGCGATATTGAACCAATACATTTTAGAAGTATAA 1338
||||||||||||||.|||||||||||||||.|.||||||
RBAM_017350__ 1300 TTAAAAGCGATATTAAACCAATACATTTTACAGGTATAA 1338
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