Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02902 and RBAM_017330
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence dna-align/BSNT_02902___xynB.1.9828.seq
# -bsequence dna-align/RBAM_017330___xynB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02902___xynB-RBAM_017330___xynB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02902___xynB-RBAM_017330___xynB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02902___xynB
# 2: RBAM_017330___xynB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1602
# Identity: 1456/1602 (90.9%)
# Similarity: 1456/1602 (90.9%)
# Gaps: 0/1602 ( 0.0%)
# Score: 6696.0
#
#
#=======================================
BSNT_02902___ 1 ATGAAGATTACCAATCCCGTACTTAAAGGATTCAATCCCGATCCAAGTAT 50
||||||||||.||||||.|||||||||||||||||.||||||||.|||||
RBAM_017330__ 1 ATGAAGATTATCAATCCAGTACTTAAAGGATTCAACCCCGATCCGAGTAT 50
BSNT_02902___ 51 TTGTAGGGCAGGAGAGGATTATTATATCGCTGTATCTACATTTGAGTGGT 100
|||.||||..||||||||||||||||||||||||||||||||||||||||
RBAM_017330__ 51 TTGCAGGGTTGGAGAGGATTATTATATCGCTGTATCTACATTTGAGTGGT 100
BSNT_02902___ 101 TTCCGGGAGTCCAGATACACCACTCAAAAGATTTAGTAAATTGGCACTTA 150
|||||||||||||||||||||||||||||||||||||.||||||||||||
RBAM_017330__ 101 TTCCGGGAGTCCAGATACACCACTCAAAAGATTTAGTCAATTGGCACTTA 150
BSNT_02902___ 151 GTTGCACATCCATTACAGAGAGTTTCACAATTAGACATGAAAGGAAATCC 200
||||||||||||||||||||||||||.|||||||||||||||||||||||
RBAM_017330__ 151 GTTGCACATCCATTACAGAGAGTTTCGCAATTAGACATGAAAGGAAATCC 200
BSNT_02902___ 201 AAATTCAGGTGGGGTTTGGGCACCATGTTTAAGCTATAGTGATGGGAAGT 250
.||||||||.|||||.|||||.|||||||||||.||.||.||.||.||||
RBAM_017330__ 201 TAATTCAGGCGGGGTCTGGGCGCCATGTTTAAGTTACAGCGACGGAAAGT 250
BSNT_02902___ 251 TTTGGCTTATCTATACGGATGTTAAGGTAGTAGATGGCGCATGGAAAGAT 300
|||||||.||||||||||||||||||||.|||||||||||.|||||||||
RBAM_017330__ 251 TTTGGCTGATCTATACGGATGTTAAGGTTGTAGATGGCGCCTGGAAAGAT 300
BSNT_02902___ 301 TGTCACAATTATTTAGTTACTTGTGAAACGATTAATGGTGATTGGAGTGA 350
||.||||||||||||||.||||||||.||||||.|||||||||||.|.||
RBAM_017330__ 301 TGCCACAATTATTTAGTGACTTGTGACACGATTGATGGTGATTGGGGGGA 350
BSNT_02902___ 351 GCCGATTACATTAAATAGCTCGGGATTTGATGCTTCTTTGTTCCATGATA 400
||||||..|||||||.||||||||.|||||||||||||||||||||||||
RBAM_017330__ 351 GCCGATACCATTAAACAGCTCGGGTTTTGATGCTTCTTTGTTCCATGATA 400
BSNT_02902___ 401 AGGATGGAAAAAAGTATTTATTAAATATGTTATGGGATCACCGTATTGAT 450
.||||||.|||||.||||||||||||||||||||||||||.|||||||||
RBAM_017330__ 401 CGGATGGGAAAAAATATTTATTAAATATGTTATGGGATCAGCGTATTGAT 450
BSNT_02902___ 451 CGGCACTCATTTGGAGGAATTGTTATACAGGAATATTCTGATAAAGAGCA 500
||||||||.||||||||.|||||.||.|||||||||||||||||.|||||
RBAM_017330__ 451 CGGCACTCCTTTGGAGGCATTGTCATGCAGGAATATTCTGATAAGGAGCA 500
BSNT_02902___ 501 AAAATTAATCGGTAAACCAAAAGTTATATTTGAAGGAACGGATAGAAAAC 550
||||.|||||||||||||.|||||.||.|||.|||||||.||.|||||.|
RBAM_017330__ 501 AAAACTAATCGGTAAACCGAAAGTGATTTTTAAAGGAACTGAAAGAAAGC 550
BSNT_02902___ 551 TGACAGAAGCTCCGCATCTTTATCATATCGGGAACTATTATTATTTATTA 600
||||||||||.|||||.|||||.|.|||||||||||||||||||||||||
RBAM_017330__ 551 TGACAGAAGCGCCGCACCTTTACCGTATCGGGAACTATTATTATTTATTA 600
BSNT_02902___ 601 ACTGCAGAAGGAGGAACACGGTACGAACATGCTGCTACAATTGCCCGTTC 650
||.||||||||||||||.||||.|||||||||||||||||||||||||||
RBAM_017330__ 601 ACCGCAGAAGGAGGAACGCGGTTCGAACATGCTGCTACAATTGCCCGTTC 650
BSNT_02902___ 651 TGCAAATATTGAGGGGCCATATGAAGTTCATCCCGATAATCCAATCTTAA 700
|||||||||||||||.|||||||||||||||||.||||||||.|||||||
RBAM_017330__ 651 TGCAAATATTGAGGGTCCATATGAAGTTCATCCTGATAATCCTATCTTAA 700
BSNT_02902___ 701 CGTCATGGCATGACCCAGGAAATCCATTGCAAAAATGTGGTCATGCATCC 750
||||||||||||..||.|.||||||..||||||||||.||.|||||||||
RBAM_017330__ 701 CGTCATGGCATGCGCCGGAAAATCCGCTGCAAAAATGCGGACATGCATCC 750
BSNT_02902___ 751 ATTGTTCAAACACATACAGATGAGTGGTATTTAGCTCATTTAACGGGACG 800
|||||.|||||||||||||.||||||||||||||||||||||||||||||
RBAM_017330__ 751 ATTGTACAAACACATACAGGTGAGTGGTATTTAGCTCATTTAACGGGACG 800
BSNT_02902___ 801 TCCTATTCATCCTGACGATGATTCAATTTTTCAGCAGAGAGGATACTGTC 850
|||.||||||||.||||||||||||||||||||||||||||||||.||||
RBAM_017330__ 801 TCCCATTCATCCGGACGATGATTCAATTTTTCAGCAGAGAGGATATTGTC 850
BSNT_02902___ 851 CTTTGGGCAGAGAAACAGCTATTCAAAAACTTTACTGGAAAGATGAATGG 900
||.|||||||||||||||||||||||||.||.||.||||||||||..|||
RBAM_017330__ 851 CTCTGGGCAGAGAAACAGCTATTCAAAAGCTCTATTGGAAAGATGGCTGG 900
BSNT_02902___ 901 CCCTATGTAGTAGGTGGAAAAGAAGGAAGCTTGGAGGTAGATGCACCTTC 950
||.|||||||.|||.|||||||||||.||||||||.||.|||||.|||||
RBAM_017330__ 901 CCTTATGTAGCAGGCGGAAAAGAAGGGAGCTTGGAAGTGGATGCGCCTTC 950
BSNT_02902___ 951 TATACCCGAAACAATATTTGAAGCAACGTACCCGGAAGTTGATGAATTTG 1000
||||||.||||||||.|||||||..|||||.|||||||||||||||||||
RBAM_017330__ 951 TATACCTGAAACAATGTTTGAAGACACGTATCCGGAAGTTGATGAATTTG 1000
BSNT_02902___ 1001 AGGATTCAACATTAAATATAAATTTTCAAACTTTAAGGATTCCATTCACG 1050
|||||.|||||||||||||.|||||||||||.|||||.|||||.||.|||
RBAM_017330__ 1001 AGGATGCAACATTAAATATTAATTTTCAAACGTTAAGAATTCCGTTTACG 1050
BSNT_02902___ 1051 AATGAATTAGGTTCATTGACTCAAGCGCCAAATCATTTACGATTATTCGG 1100
.|..|||||||.|||||.|||||||.||||||||||||||||||||.|||
RBAM_017330__ 1051 GAGAAATTAGGATCATTAACTCAAGTGCCAAATCATTTACGATTATACGG 1100
BSNT_02902___ 1101 TCATGAATCATTGACCTCGACATTTACTCAGGCATTTGTAGCCAGACGCT 1150
.||||||||.||.||.||||||||||||||||||||||||||||||||||
RBAM_017330__ 1101 CCATGAATCCTTAACTTCGACATTTACTCAGGCATTTGTAGCCAGACGCT 1150
BSNT_02902___ 1151 GGCAAAGTCTCCATTTTGAAGCCGAAACTGCTGTTGAGTTTTATCCGGAA 1200
|||||||.||||||||||||||.|||||.|||||||.|||||||||||||
RBAM_017330__ 1151 GGCAAAGCCTCCATTTTGAAGCGGAAACGGCTGTTGCGTTTTATCCGGAA 1200
BSNT_02902___ 1201 AATTTTCAACAAGCCGCTGGATTGGTGAATTACTACAATACAGAGAACTG 1250
||||||||.|||||||||||.||||||||.||.||||||||||||||.||
RBAM_017330__ 1201 AATTTTCAGCAAGCCGCTGGTTTGGTGAACTATTACAATACAGAGAATTG 1250
BSNT_02902___ 1251 GACGGCTCTTCAAGTCACGCATGATGAAGAACTTGGCCGCATTCTTGAAT 1300
|||||||||||||||||||.|||||||||||||||||||.||||||||||
RBAM_017330__ 1251 GACGGCTCTTCAAGTCACGTATGATGAAGAACTTGGCCGTATTCTTGAAT 1300
BSNT_02902___ 1301 TAACAATATGTGACAACTTTTCTTTTTCACAGCCATTAAATAATAAAATT 1350
||||.||||||||.|||||||||||||||||.||.|||||.|||||||||
RBAM_017330__ 1301 TAACGATATGTGATAACTTTTCTTTTTCACAACCGTTAAAAAATAAAATT 1350
BSNT_02902___ 1351 GTTATTCCTCGTGAAGTAAAGTATGTATATTTAAGAGTAAATATTGAAAA 1400
||.||||||||||||||.||||||||.|||||||.|||.|||||||||||
RBAM_017330__ 1351 GTGATTCCTCGTGAAGTCAAGTATGTCTATTTAAAAGTGAATATTGAAAA 1400
BSNT_02902___ 1401 AGACAAATATTATTATTTTTATTCTTTTAACAAAGAAGATTGGCACAAAA 1450
.||.||||||||||||||.|||||.|||||||||||||||||||||||||
RBAM_017330__ 1401 CGAAAAATATTATTATTTGTATTCATTTAACAAAGAAGATTGGCACAAAA 1450
BSNT_02902___ 1451 TTGACATAGCACTGGAATCGAAAAAATTATCAGATGATTACATCCGTGGG 1500
|.|||||.|||.|.||||||||||||||||||||||||||||||||.||.
RBAM_017330__ 1451 TCGACATTGCATTAGAATCGAAAAAATTATCAGATGATTACATCCGCGGC 1500
BSNT_02902___ 1501 GGAGGATTCTTCACAGGGGCCTTTGTAGGGATGCAATGCCAAGATACCAG 1550
||.||||||||.|||||.||.||||||||||||||||||||||||||.||
RBAM_017330__ 1501 GGGGGATTCTTTACAGGAGCTTTTGTAGGGATGCAATGCCAAGATACGAG 1550
BSNT_02902___ 1551 TGGTAATCATATTCCGGCCGACTTTAGATATTTTCGTTATAAAGAAAAAT 1600
.|||.|||||||||||||||||||.||||||||.||||||||||||||||
RBAM_017330__ 1551 CGGTCATCATATTCCGGCCGACTTCAGATATTTCCGTTATAAAGAAAAAT 1600
BSNT_02902___ 1601 AA 1602
||
RBAM_017330__ 1601 AA 1602
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