Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02898 and RBAM_017320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence dna-align/BSNT_02898___xynP.1.9828.seq
# -bsequence dna-align/RBAM_017320___xynP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02898___xynP-RBAM_017320___xynP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02898___xynP-RBAM_017320___xynP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02898___xynP
# 2: RBAM_017320___xynP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1392
# Identity: 1275/1392 (91.6%)
# Similarity: 1275/1392 (91.6%)
# Gaps: 0/1392 ( 0.0%)
# Score: 5907.0
#
#
#=======================================
BSNT_02898___ 1 ATGCTCAGTGAAAATGTAAAGAAGATTAGCATGGTTGAAAAAGTTGGATA 50
||||||.|||||||||||||||||||.|||||||||||||||||||||||
RBAM_017320__ 1 ATGCTCGGTGAAAATGTAAAGAAGATCAGCATGGTTGAAAAAGTTGGATA 50
BSNT_02898___ 51 TGCGTCTGGAGATTTTGCTTGTAATTTAATTTATGCAACAGTGTCTACGT 100
|||||||||||||||||||||||||.||||||||||||||||||||||||
RBAM_017320__ 51 TGCGTCTGGAGATTTTGCTTGTAATCTAATTTATGCAACAGTGTCTACGT 100
BSNT_02898___ 101 ATCTTTTGTTCTTCTATACAGATGTTTTTGGTTTATCGGCAGCAGCAGCC 150
|||||||||||||||||||||||||.||||||||||||||||||||||||
RBAM_017320__ 101 ATCTTTTGTTCTTCTATACAGATGTATTTGGTTTATCGGCAGCAGCAGCC 150
BSNT_02898___ 151 GGTACTATGTTTTTAGTGGTTAGAATAATCGACGCTCTCGCTGATCCTTT 200
|||||.||||||||||||||||||||.|||||||||||||||||||||||
RBAM_017320__ 151 GGTACGATGTTTTTAGTGGTTAGAATCATCGACGCTCTCGCTGATCCTTT 200
BSNT_02898___ 201 TATCGGAACAATAGTTGACAGAACGAACAGCAGATTTGGACGCTTTAGAC 250
||||||||||||.|||||||||||.||.|||||.|||||.|||||.||||
RBAM_017320__ 201 TATCGGAACAATCGTTGACAGAACAAATAGCAGGTTTGGCCGCTTCAGAC 250
BSNT_02898___ 251 CGTATCTTTTATTCGGAGCTTTTCCATTTGTCATACTGGCAATACTCTGT 300
|||||||||||||||||||||||||.|||||||||.||||||||||||||
RBAM_017320__ 251 CGTATCTTTTATTCGGAGCTTTTCCCTTTGTCATATTGGCAATACTCTGT 300
BSNT_02898___ 301 TTTACAACACCAGACTTTTCGGATATGGGGAAATTAGTATATGCCTATAT 350
||||||||.||.||.|||||||||||||||||||||.|||||||||||||
RBAM_017320__ 301 TTTACAACCCCGGATTTTTCGGATATGGGGAAATTAATATATGCCTATAT 350
BSNT_02898___ 351 AACCTATGTTGGCTTGTCGCTTACATACACAACGATAAACGTTCCATATG 400
.||||||||.|||.|.||||||||||||||.|.|||||||||.|||||||
RBAM_017320__ 351 CACCTATGTCGGCCTATCGCTTACATACACCATGATAAACGTGCCATATG 400
BSNT_02898___ 401 GCGCGTTAACTTCTGCAATGACTAGAAATAATCAAGAAGTTGTTAGTATA 450
||||||||||.|||||||||||.|||||||||||||||||||||||||||
RBAM_017320__ 401 GCGCGTTAACATCTGCAATGACCAGAAATAATCAAGAAGTTGTTAGTATA 450
BSNT_02898___ 451 ACTTCTGTTCGCATGTTATTTGCGAATCTTGGGGGACTTGTCGTTGCATT 500
||.|||||.||.||||||||||||||||||||.|||||||||||||||||
RBAM_017320__ 451 ACGTCTGTCCGTATGTTATTTGCGAATCTTGGAGGACTTGTCGTTGCATT 500
BSNT_02898___ 501 TTTTGTTCCCTTACTGGCTGCTTATTTAAGCGATACTTCCGGCAACGAGT 550
|||||||||.|||||||||||||||||||||||||.||||||||.|||.|
RBAM_017320__ 501 TTTTGTTCCTTTACTGGCTGCTTATTTAAGCGATAATTCCGGCAGCGAAT 550
BSNT_02898___ 551 CTCTTGGCTGGCAACTAACCATGGGTATTTTGGGAATGATAGGCGGGTGC 600
|||||||||||||.|||||||||||||||.|||||.|.||.|||||||||
RBAM_017320__ 551 CTCTTGGCTGGCAGCTAACCATGGGTATTATGGGAGTTATTGGCGGGTGC 600
BSNT_02898___ 601 CTTTTAATCTTTTGTTTTAAAAGCACAAAAGAGCGGGTCACTCTTCAAAA 650
|||||||||||||||||||||||||||||||||||.|||||.||||||||
RBAM_017320__ 601 CTTTTAATCTTTTGTTTTAAAAGCACAAAAGAGCGTGTCACGCTTCAAAA 650
BSNT_02898___ 651 ATCCGAAGAAAAAATTAAATTTACGGATATATTTGAGCAGTTTCGTGTTA 700
|||.||||||||||||||||||.||||||||||||||||.||||||||||
RBAM_017320__ 651 ATCGGAAGAAAAAATTAAATTTTCGGATATATTTGAGCAATTTCGTGTTA 700
BSNT_02898___ 701 ATCGTCCACTTGTTGTATTAAGTATTTTCTTTATTATTATTTTTGGAGTG 750
||||.||.||.|||||||||||||||||||||||||||||||||||||||
RBAM_017320__ 701 ATCGGCCTCTAGTTGTATTAAGTATTTTCTTTATTATTATTTTTGGAGTG 750
BSNT_02898___ 751 AATTCCATCAGTAATTCGGTTGGCATTTATTACGTAACATATAACTTAGA 800
|||||.||||||||||||||||||||.|||||||||||.|||||.|||||
RBAM_017320__ 751 AATTCAATCAGTAATTCGGTTGGCATCTATTACGTAACGTATAATTTAGA 800
BSNT_02898___ 801 AAGAGAGGATTTGGTGAAGTGGTACGGTTTGATAGGAAGTTTGCCCGCTT 850
|||||.||||||.||||||||||||||||||.|.||.||||||||.||||
RBAM_017320__ 801 AAGAGCGGATTTAGTGAAGTGGTACGGTTTGTTGGGGAGTTTGCCTGCTT 850
BSNT_02898___ 851 TGGTCATTTTACCGTTTATTCCAAGGCTTCATCAATTTTTGGGGAAGAAG 900
||||||||||||||||||||||||.||||||||||||.||.|||||||||
RBAM_017320__ 851 TGGTCATTTTACCGTTTATTCCAAAGCTTCATCAATTATTAGGGAAGAAG 900
BSNT_02898___ 901 AAATTACTAAACTATGCATTATTACTGAATATTATCGGCCTCTTAGCTTT 950
||||||.|||||||||||||||||||||||||.|||||||||||||||||
RBAM_017320__ 901 AAATTATTAAACTATGCATTATTACTGAATATGATCGGCCTCTTAGCTTT 950
BSNT_02898___ 951 ACTGTTTGCTCCGCCAAGTAATGTATACCTCATACTTGTCTGTCGATTAA 1000
|||.||.|.||||.||||||||||||.|||.||||||..||.||||||..
RBAM_017320__ 951 ACTTTTCGTTCCGTCAAGTAATGTATTCCTGATACTTTCCTTTCGATTGC 1000
BSNT_02898___ 1001 TCGCTGCTGCTGGAAGTCTCACTGCCGGGGGATATATGTGGGCGCTTATT 1050
|.||.|||||.|||||||||||||||||||||||||||||||||||||||
RBAM_017320__ 1001 TGGCCGCTGCAGGAAGTCTCACTGCCGGGGGATATATGTGGGCGCTTATT 1050
BSNT_02898___ 1051 CCTGAAACAATTGAATATGGAGAGTACAGGACTGGGAAAAGAATGGGTGG 1100
|||||||||||.||||||||||||||.|.|||.||||||||||||||.||
RBAM_017320__ 1051 CCTGAAACAATAGAATATGGAGAGTATAAGACCGGGAAAAGAATGGGCGG 1100
BSNT_02898___ 1101 GCTCATTTACGCTATCATCGGATTTTTCTTTAAGTTTGGTATGGCCTTAG 1150
.|||||.||||||||.|||||||||||||||||.||.||.||||||||.|
RBAM_017320__ 1101 TCTCATATACGCTATTATCGGATTTTTCTTTAAATTCGGCATGGCCTTGG 1150
BSNT_02898___ 1151 GAGGAGTTGTTCCGGGTCTGGTTCTTGATAAGTTTGGATATGTAGCAAAT 1200
||||.|||||.||||||.|||||||.|||.|||||||||||||.||||||
RBAM_017320__ 1151 GAGGGGTTGTACCGGGTTTGGTTCTAGATCAGTTTGGATATGTGGCAAAT 1200
BSNT_02898___ 1201 CAGGCACAAACCCCGGCGGCATTAATGGGGATTTTAATTACAACAACGAT 1250
||||..|||||.||||.||||||.|.|||.|||||||||||||||||.||
RBAM_017320__ 1201 CAGGTGCAAACGCCGGAGGCATTGACGGGAATTTTAATTACAACAACCAT 1250
BSNT_02898___ 1251 TATTCCCGTGTTCTTGCTTGTTCTAGCTTTAATTGATATTAATTTCTATA 1300
|||||||||||||||.||.|||||.||..|.|||||||||||||||||||
RBAM_017320__ 1251 TATTCCCGTGTTCTTACTGGTTCTGGCCATGATTGATATTAATTTCTATA 1300
BSNT_02898___ 1301 ACTTAGATGAGAAAAAATATAAAAACATGGTTCGAGAATTAGAGAATAGA 1350
|||||||||||||||||||.||||.|||||||||||||||||||||||||
RBAM_017320__ 1301 ACTTAGATGAGAAAAAATACAAAAGCATGGTTCGAGAATTAGAGAATAGA 1350
BSNT_02898___ 1351 GACAAAGTTTATTTGGATCATATTGATGATTTCACTATTTAG 1392
||||||||||||||||||||||||||.|||||||....|||.
RBAM_017320__ 1351 GACAAAGTTTATTTGGATCATATTGACGATTTCAAAGCTTAA 1392
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