Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02802 and RBAM_017260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence dna-align/BSNT_02802___glnA.1.9828.seq
# -bsequence dna-align/RBAM_017260___glnA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02802___glnA-RBAM_017260___glnA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02802___glnA-RBAM_017260___glnA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02802___glnA
# 2: RBAM_017260___glnA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1335
# Identity: 1170/1335 (87.6%)
# Similarity: 1170/1335 (87.6%)
# Gaps: 0/1335 ( 0.0%)
# Score: 5190.0
#
#
#=======================================
BSNT_02802___ 1 ATGGCAAATTACACTAGAGAAGATATCGAAACATTAGTAAAAGAAGAAAA 50
||||||||.|||||.||||||||.||||.||.|||||||||.||.|||||
RBAM_017260__ 1 ATGGCAAAGTACACAAGAGAAGACATCGTAAAATTAGTAAATGAGGAAAA 50
BSNT_02802___ 51 CGTGAAGTATATCCGCCTTCAATTTACTGACATTCTTGGAACAATCAAGA 100
|||.||||||||||||||||||||.||.||||||||.|||||.||.||.|
RBAM_017260__ 51 CGTAAAGTATATCCGCCTTCAATTCACAGACATTCTCGGAACGATTAAAA 100
BSNT_02802___ 101 ATGTTGAGATTCCTGTAAGCCAGCTTGGAAAAGCGCTTGATAATAAAGTC 150
|.||.||.||||||||.||||||||||.||||||.||||||||||||..|
RBAM_017260__ 101 ACGTGGAAATTCCTGTGAGCCAGCTTGAAAAAGCACTTGATAATAAATGC 150
BSNT_02802___ 151 ATGTTTGACGGTTCTTCTATTGAGGGATTCGTTCGTATCGAAGAGTCAGA 200
|||||.|||||||||||.||.||.||.|||||.||||||||||||||.||
RBAM_017260__ 151 ATGTTCGACGGTTCTTCCATCGAAGGTTTCGTCCGTATCGAAGAGTCTGA 200
BSNT_02802___ 201 CATGTACCTGTATCCAGATCTAAATACATTTGTTATCTTCCCATGGACAG 250
.||||||.|.|||||.|||||.||.||||||||.||||||||||||||.|
RBAM_017260__ 201 TATGTACTTATATCCTGATCTGAACACATTTGTAATCTTCCCATGGACGG 250
BSNT_02802___ 251 CTGAAAAAGGTAAAGTAGCACGTTTCATCTGTGATATTTATAATCCGGAT 300
||||||||||||||||||||||.|||||||||||.|||||.||||||||.
RBAM_017260__ 251 CTGAAAAAGGTAAAGTAGCACGCTTCATCTGTGACATTTACAATCCGGAC 300
BSNT_02802___ 301 GGCACACCTTTCGAAGGTGACCCGCGAAACAACTTAAAACGGATTCTGAA 350
|||||.||.|||||||||||||||||.||||||.|.||||||||||||||
RBAM_017260__ 301 GGCACGCCGTTCGAAGGTGACCCGCGTAACAACCTCAAACGGATTCTGAA 350
BSNT_02802___ 351 AGAAATGGAAGACCTCGGCTTCAGTGATTTTAACCTTGGACCTGAGCCTG 400
|||||||.||||.|||||.|||||.|||||.||.||||||||||||||||
RBAM_017260__ 351 AGAAATGAAAGAACTCGGTTTCAGCGATTTCAATCTTGGACCTGAGCCTG 400
BSNT_02802___ 401 AATTCTTCTTATTCAAATTGGACGAAAAAGGCGAGCCAACGCTTGAACTA 450
||||||||.|.||.|||||.||.|||||||||||.||.|||||||||.|.
RBAM_017260__ 401 AATTCTTCCTGTTTAAATTAGATGAAAAAGGCGAACCGACGCTTGAATTG 450
BSNT_02802___ 451 AACGACAAAGGCGGATATTTCGACTTAGCGCCAACTGATTTAGGAGAAAA 500
|||||.|||||||||||.||||||.|.||.||.|||||.||.||||||||
RBAM_017260__ 451 AACGATAAAGGCGGATACTTCGACCTGGCTCCGACTGACTTGGGAGAAAA 500
BSNT_02802___ 501 CTGCCGCCGCGATATCGTGCTTGAGCTTGAAGAGATGGGCTTTGAAATCG 550
|||||||||||||||||||||||||||||||||.||||||||||||||||
RBAM_017260__ 501 CTGCCGCCGCGATATCGTGCTTGAGCTTGAAGAAATGGGCTTTGAAATCG 550
BSNT_02802___ 551 AAGCGTCTCACCACGAAGTAGCACCTGGTCAACACGAAATCGACTTTAAA 600
||||.||||||||.|||||.||.||.|||||.|||||||||||.||||||
RBAM_017260__ 551 AAGCATCTCACCATGAAGTTGCTCCGGGTCAGCACGAAATCGATTTTAAA 600
BSNT_02802___ 601 TATGCTGGAGCAGTCCGCTCTTGTGATGACATCCAAACTTTTAAACTAGT 650
|||||.||.||..||||.||||||||.||||||||||||||.|||||.||
RBAM_017260__ 601 TATGCCGGTGCCATCCGTTCTTGTGACGACATCCAAACTTTCAAACTGGT 650
BSNT_02802___ 651 TGTCAAAACAATTGCCCGCAAACACGGCCTGCATGCGACATTTATGCCAA 700
|||||||||.||.||||||||||||||.||||||||||||||.|||||||
RBAM_017260__ 651 TGTCAAAACGATCGCCCGCAAACACGGTCTGCATGCGACATTCATGCCAA 700
BSNT_02802___ 701 AACCATTGTTCGGTGTGAACGGTTCAGGTATGCACTGCAATCTATCACTC 750
||||..|||||||.||.||||||||.||||||||||||||.|||||||||
RBAM_017260__ 701 AACCGCTGTTCGGCGTAAACGGTTCCGGTATGCACTGCAACCTATCACTC 750
BSNT_02802___ 751 TTCAAAAATGGTGTTAACGCATTCTTTGACGAAAACGCAGATCTTCAGTT 800
||.|||.||.|.||||||||.||||||||..||.||||.|||||||||.|
RBAM_017260__ 751 TTTAAAGATAGCGTTAACGCGTTCTTTGATAAAGACGCTGATCTTCAGCT 800
BSNT_02802___ 801 AAGTGAAACAGCGAAACACTTCATTGCAGGTATCGTGAAGCACGCAACAA 850
.|||||||||||.|||||.||||||||.||||||||.||.|||||.||||
RBAM_017260__ 801 GAGTGAAACAGCAAAACATTTCATTGCCGGTATCGTAAAACACGCGACAA 850
BSNT_02802___ 851 GCTTTACAGCAGTAACAAACCCGACAGTAAACTCTTACAAACGTCTTGTT 900
|||||||.||.||.||||||||||||||.||||||||||||||.||||||
RBAM_017260__ 851 GCTTTACGGCTGTCACAAACCCGACAGTGAACTCTTACAAACGCCTTGTT 900
BSNT_02802___ 901 CCTGGCTATGAAGCACCTTGCTATGTAGCATGGAGCGCGCAAAACAGAAG 950
||.||||||||||||||||||||.||.|||||||||||||||||||||||
RBAM_017260__ 901 CCGGGCTATGAAGCACCTTGCTACGTGGCATGGAGCGCGCAAAACAGAAG 950
BSNT_02802___ 951 CCCGCTTATCCGTATCCCGGCTTCTCGCGGCATCAGCACACGTGTTGAAG 1000
||||||.|||||||||||||||||.||||||||||||||.||||||||||
RBAM_017260__ 951 CCCGCTGATCCGTATCCCGGCTTCCCGCGGCATCAGCACGCGTGTTGAAG 1000
BSNT_02802___ 1001 TACGCAGCGTAGACCCAGCTGCAAACCCATACCTTGCACTTAGCGTATTG 1050
|.||||||||||||||.||.||||||||.|||||.||..|.|||||||||
RBAM_017260__ 1001 TCCGCAGCGTAGACCCGGCGGCAAACCCGTACCTGGCGTTAAGCGTATTG 1050
BSNT_02802___ 1051 CTTGCTGCAGGTTTAGACGGTATCAAAAACAAACTGGAAGCGCCGGCTCC 1100
|||||.|||||..|.|||||.||||||||||||||.|||||.||||||||
RBAM_017260__ 1051 CTTGCAGCAGGCCTTGACGGAATCAAAAACAAACTTGAAGCACCGGCTCC 1100
BSNT_02802___ 1101 AATCGACCGCAACATCTATGTGATGAGCAAAGAAGAGCGCATGGAAAACG 1150
.||.||||||||||||||.||.||||||||||||||||||||||||||||
RBAM_017260__ 1101 GATTGACCGCAACATCTACGTCATGAGCAAAGAAGAGCGCATGGAAAACG 1150
BSNT_02802___ 1151 GAATCGTTGACCTTCCAGCAACACTTGCGGAAGCACTAGAAGAATTCAAA 1200
|.|||||.||.|||||.||.|||||.||||||||.||.||.|||||||||
RBAM_017260__ 1151 GCATCGTAGATCTTCCGGCGACACTGGCGGAAGCTCTCGACGAATTCAAA 1200
BSNT_02802___ 1201 TCAAACGAAGTCATGGTCAAAGCGCTGGGCGAGCACCTATTCGAACACTT 1250
|||||||||||||||||...|||.||.|||||||||||.|||||||||||
RBAM_017260__ 1201 TCAAACGAAGTCATGGTTGCAGCACTCGGCGAGCACCTGTTCGAACACTT 1250
BSNT_02802___ 1251 CATCGAAGCAAAAGAAATCGAATGGGATATGTTCCGCACGCAAGTTCACC 1300
|||||||||||||||||||||||||||||||||||||||.||.|||||.|
RBAM_017260__ 1251 CATCGAAGCAAAAGAAATCGAATGGGATATGTTCCGCACACAGGTTCATC 1300
BSNT_02802___ 1301 CTTGGGAACACGAACAGTATATGTCTCAGTATTAA 1335
|.|||||.|.||||||.||.|||||||||||||||
RBAM_017260__ 1301 CGTGGGAGCGCGAACAATACATGTCTCAGTATTAA 1335
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