Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02784 and RBAM_017100
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:44
# Commandline: needle
# -asequence dna-align/BSNT_02784___ebrB.1.9828.seq
# -bsequence dna-align/RBAM_017100___ebrB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02784___ebrB-RBAM_017100___ebrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02784___ebrB-RBAM_017100___ebrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02784___ebrB
# 2: RBAM_017100___ebrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity: 256/373 (68.6%)
# Similarity: 256/373 (68.6%)
# Gaps: 38/373 (10.2%)
# Score: 831.0
#
#
#=======================================
BSNT_02784___ 1 ATGAGAGGATTGCTTTATTTGGCTCTCGCCATTGTATCTGAAGTGTTTGG 50
||||.||||||.||||..|||||..|.|||||||||||.||||||||.||
RBAM_017100__ 1 ATGAAAGGATTACTTTGCTTGGCATTAGCCATTGTATCAGAAGTGTTCGG 50
BSNT_02784___ 51 GAGCACGATGTTGAAGCTTTCAGAAGGATTTACACAAGCC--TGGCCCAT 98
||||||||||.|||||||.||.||.||.|||||.|| || ||||||..
RBAM_017100__ 51 GAGCACGATGCTGAAGCTGTCGGACGGTTTTACGCA--CCTGTGGCCCGC 98
BSNT_02784___ 99 TGCCGGAGTCATAGTCGGATTTCTTTCTG-----CTTTTACGTTTCTAAG 143
|..|||.|||||.|.|||| .||.| ||||||.||||.|.||
RBAM_017100__ 99 TCTCGGCGTCATTGCCGGA-----ATCGGAGCCTCTTTTATGTTTTTGAG 143
BSNT_02784___ 144 CTTTTCTTTAAAAACAATTGACTTATCAAGCGCGTATGCAACATGGTCGG 193
|||.||.||.||||...||||.|||||...|||.||.||.||||||||.|
RBAM_017100__ 144 CTTCTCATTGAAAAGCCTTGATTTATCCGCCGCATACGCGACATGGTCAG 193
BSNT_02784___ 194 GCGTTGGTACCGCGCTTACAGCAATTGTCGGGTTTTTGCTTTTTGGCGAA 243
|.||.||.|||||..|.||.|||||||||||.|||||..|||||...||.
RBAM_017100__ 194 GTGTCGGCACCGCTTTAACGGCAATTGTCGGCTTTTTTGTTTTTAAGGAG 243
BSNT_02784___ 244 ACCAT--CAGTTTAAAAGGTGTATTCGGTCTCACGCTT------GTCATT 285
.|||| ||||..|||.|.|| .|||| |||| |||||.
RBAM_017100__ 244 GCCATGACAGTCAAAATGATG--ATCGG------GCTTGTTTTGGTCATC 285
BSNT_02784___ 286 GCAGGCGTGATCGTGCTAAATCAATCGAAAGCCC---ACGCTGAAGATAA 332
.|.|||||.|||.||||.||.|..||.||..|.| |.|||.|| ||
RBAM_017100__ 286 ACGGGCGTCATCCTGCTGAACCGTTCCAAGTCTCAAAAAGCTAAA---AA 332
BSNT_02784___ 333 AAAACAGACGGCCTGTGAG-TGA 354
|||.||.||||||.| ||| |||
RBAM_017100__ 333 AAATCAAACGGCCCG-GAGCTGA 354
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