Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02753 and RBAM_016870
See
Amino acid alignment /
Visit
BSNT_02753 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:43
# Commandline: needle
# -asequence dna-align/BSNT_02753___cotE.1.9828.seq
# -bsequence dna-align/RBAM_016870___cotE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02753___cotE-RBAM_016870___cotE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02753___cotE-RBAM_016870___cotE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02753___cotE
# 2: RBAM_016870___cotE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 547
# Identity: 465/547 (85.0%)
# Similarity: 465/547 (85.0%)
# Gaps: 2/547 ( 0.4%)
# Score: 1985.0
#
#
#=======================================
BSNT_02753___ 1 ATGTCTGAATACAGGGAAATTATTACGAAGGCAGTAGTAGCGAAAGGCCG 50
|||||||||||||||||||||||||||||.||.|||||.||||||||..|
RBAM_016870__ 1 ATGTCTGAATACAGGGAAATTATTACGAAAGCGGTAGTTGCGAAAGGAAG 50
BSNT_02753___ 51 AAAATTCACCCAATGCACCAACACCATCTCGCCTGAGA-AAAAACCGAGC 99
||||||||||||||||||||||||.|||||.|||| || ||||||||...
RBAM_016870__ 51 AAAATTCACCCAATGCACCAACACGATCTCACCTG-GAGAAAAACCGTCA 99
BSNT_02753___ 100 AGCATTTTGGGTGGTTGGATTATTAACCACAAGTATGACGCTGAAAAAAT 149
||.||.|||||.||.||||||||.|||||||||||.||.||.|||||.||
RBAM_016870__ 100 AGTATATTGGGCGGCTGGATTATCAACCACAAGTACGATGCCGAAAAGAT 149
BSNT_02753___ 150 TGGAAAAACGGTAGAAATTGAAGGGTATTATGATATAAACGTATGGTACT 199
.||.||.||.||||||||||||||||||||||||||||||||.|||||||
RBAM_016870__ 150 CGGGAAGACTGTAGAAATTGAAGGGTATTATGATATAAACGTCTGGTACT 199
BSNT_02753___ 200 CTTACGCGGACAACACAAAGACAGAGGTTGTCACAGAACGGGTAAAATAT 249
|||||||.||.||.|||||.|||||.|||||.||.||..|.|||||.|||
RBAM_016870__ 200 CTTACGCCGATAATACAAAAACAGAAGTTGTAACCGAGAGAGTAAAGTAT 249
BSNT_02753___ 250 GTAGATGTCATTAAACTCAGATACAGAGACAATAATTACTTAGATGATGA 299
||.|||||.||||||||||||||||||||||..||||||||||||||.||
RBAM_016870__ 250 GTCGATGTGATTAAACTCAGATACAGAGACACAAATTACTTAGATGACGA 299
BSNT_02753___ 300 GCATGAAGTGATTGCCAAAGTGCTTCAGCAGCCAAACTGCCTTGAAGTGA 349
.||.|||||.||||||||||||||.||||||||.||.||.||||||||.|
RBAM_016870__ 300 ACACGAAGTCATTGCCAAAGTGCTGCAGCAGCCGAATTGTCTTGAAGTCA 349
BSNT_02753___ 350 CCATTTCGCCGAATGGAAATAAAATCGTTGTGCAGGCAGAAAGAGAATTT 399
|||||||.||.||.||||||||||||||.||.||||||||.|||||||||
RBAM_016870__ 350 CCATTTCTCCTAACGGAAATAAAATCGTGGTTCAGGCAGAGAGAGAATTT 399
BSNT_02753___ 400 TTGGCGGAAGTGGTAGGGGAAACAAAGGTAGTTGTTGAGGTCAATCCTGA 449
||.||.||||||||.||.|||||.||.||.||.||.||.|||||||||||
RBAM_016870__ 400 TTAGCAGAAGTGGTCGGTGAAACGAAAGTCGTCGTCGAAGTCAATCCTGA 449
BSNT_02753___ 450 CTGGGAAGAGGATGACGAGGAAGATTGGGAAGATGAGCTTGATGAAGAGC 499
.||||||||.||.||.||.||.|||||||||||.||.|||||||||||..
RBAM_016870__ 450 TTGGGAAGAAGACGATGATGATGATTGGGAAGACGATCTTGATGAAGAAT 499
BSNT_02753___ 500 TTGAAGACATCAACCCGGAGTTTTTAGTGGGAGATCCTGAAGAATAA 546
|.||.|||||.|||||.||.||||||||.||||||||||||||||||
RBAM_016870__ 500 TAGAGGACATTAACCCTGAATTTTTAGTCGGAGATCCTGAAGAATAA 546
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.