Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02745 and RBAM_016820

See Amino acid alignment / Visit BSNT_02745 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:42
# Commandline: needle
#    -asequence dna-align/BSNT_02745___spoVS.1.9828.seq
#    -bsequence dna-align/RBAM_016820___spoVS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02745___spoVS-RBAM_016820___spoVS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02745___spoVS-RBAM_016820___spoVS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02745___spoVS
# 2: RBAM_016820___spoVS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     228/261 (87.4%)
# Similarity:   228/261 (87.4%)
# Gaps:           0/261 ( 0.0%)
# Score: 1008.0
# 
#
#=======================================

BSNT_02745___      1 ATGGAAATCTTAAAAGTTTCAGCAAAATCGAGTCCAAATTCAGTGGCAGG     50
                     |||||||||||||||||||||||||||||.||||||||||||||.|||||
RBAM_016820__      1 ATGGAAATCTTAAAAGTTTCAGCAAAATCAAGTCCAAATTCAGTAGCAGG     50

BSNT_02745___     51 TGCGCTTGCAGGCGTGTTGAGAGAGCGAGGAGCCGCCGAGATTCAAGCGA    100
                     .||||||||.||.||.|||||.||.||.|||||||||||.||||||||.|
RBAM_016820__     51 CGCGCTTGCCGGTGTATTGAGGGAACGCGGAGCCGCCGAAATTCAAGCAA    100

BSNT_02745___    101 TCGGAGCGGGTGCATTAAACCAGGCTGTAAAAGCTGTGGCGATTGCCAGG    150
                     |.||.||||||||.||||||||||||||.|||||.||.|||||||||||.
RBAM_016820__    101 TTGGGGCGGGTGCCTTAAACCAGGCTGTTAAAGCGGTTGCGATTGCCAGA    150

BSNT_02745___    151 GGATTTGTGGCGCCTAGCGGCGTTGATTTGATTTGTATTCCGGCTTTTAC    200
                     ||.|||||.|||||.||||||||.||||||||||||||||||||||||||
RBAM_016820__    151 GGCTTTGTCGCGCCAAGCGGCGTAGATTTGATTTGTATTCCGGCTTTTAC    200

BSNT_02745___    201 AGATATTCAAATCGATGGGGAAGAAAGAACAGCGATTAAATTAATCGTGG    250
                     ||||||.||.||.||.||.|||||||||||.||||||||.||||||||.|
RBAM_016820__    201 AGATATACAGATTGACGGAGAAGAAAGAACGGCGATTAAGTTAATCGTCG    250

BSNT_02745___    251 AGCCTCGCTAA    261
                     |.||.||.|||
RBAM_016820__    251 AACCCCGTTAA    261


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