Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02732 and RBAM_016700
See
Amino acid alignment /
Visit
BSNT_02732 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:41
# Commandline: needle
# -asequence dna-align/BSNT_02732.1.9828.seq
# -bsequence dna-align/RBAM_016700.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02732-RBAM_016700.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02732-RBAM_016700.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02732
# 2: RBAM_016700
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1308
# Identity: 974/1308 (74.5%)
# Similarity: 974/1308 (74.5%)
# Gaps: 54/1308 ( 4.1%)
# Score: 3552.0
#
#
#=======================================
BSNT_02732 1 ATGTCATATGTTAATGAACTCAAATCAAAGCACGGCGGTTTAACCGCACA 50
|||.|.||.||.||||||.|.||.||||||||||||||..|.|||||.||
RBAM_016700 1 ATGACTTACGTAAATGAAATGAAGTCAAAGCACGGCGGGATCACCGCCCA 50
BSNT_02732 51 TATTGTAAAAACAGAAAAATTCAAAACCGTCTCGCTTATTTTTAAGATGC 100
.||.|||||.||.||.|||||.||||||||.|||||.|..|||||.||||
RBAM_016700 51 CATCGTAAAGACCGAGAAATTTAAAACCGTTTCGCTGACGTTTAAAATGC 100
BSNT_02732 101 TTGCGCCGCTGACAAAGGATCAAGTCACCAAAAGAGCGCTTCTCCCGCAT 150
|.||.||..|.||.||.||.|..||.||.|||||.|||||..|.||||||
RBAM_016700 101 TGGCTCCTTTAACGAAAGAGCTCGTAACAAAAAGGGCGCTGTTTCCGCAT 150
BSNT_02732 151 GTGCTTCTTCGCGGAACGAAAAGCCATCCGAAAACCGCAGAATTGCGTTC 200
||||||||.||||||||..||||||..|||||||||||.||..||||.||
RBAM_016700 151 GTGCTTCTGCGCGGAACAGAAAGCCGCCCGAAAACCGCTGATCTGCGGTC 200
BSNT_02732 201 ATACTTGGATGAGCTGTACGGCACGTCAGTATCGGCTGATCTTACGAAAA 250
.||.||.|||||.|||||||||||.||.||.||.||||||||.||.||||
RBAM_016700 201 TTATTTTGATGAACTGTACGGCACATCCGTTTCAGCTGATCTGACAAAAA 250
BSNT_02732 251 AAGGAGAGCGGCACGTCATTACGTTCAGGCTTGAAATTCCGAATGAAAAA 300
|.|||||.||.||.||||||||||||||||||||.|||||.||||||||.
RBAM_016700 251 AGGGAGAACGTCATGTCATTACGTTCAGGCTTGAGATTCCTAATGAAAAG 300
BSNT_02732 301 TATTTAAAAGACCAAACGCCGCTACTTGAGAAAGGGCTCCAGCTTCTCGC 350
|||.|.||.||||.|||.|||.||.|.||.|||||.||.||||||.|..|
RBAM_016700 301 TATCTGAAGGACCGAACACCGTTATTGGAAAAAGGCCTTCAGCTTTTATC 350
BSNT_02732 351 AGAAATCGTCTTTTCACCTGCTTTAGAGGGA----GACGCTTTTCAGTCA 396
|||..|.||||||||.||.||||| ||| |.|||.||.|.|.|.
RBAM_016700 351 AGAGCTTGTCTTTTCGCCCGCTTT----GGAAAACGGCGCCTTCCTGCCC 396
BSNT_02732 397 CAATATGTGGCTCAAGAAAAACGGACGCTTAAGCAAAGAATCCAAGCCGT 446
|..|||||..|.||.||||||||||||||.||.||..|.||.||||||||
RBAM_016700 397 CTTTATGTCACGCAGGAAAAACGGACGCTGAAACAGCGGATTCAAGCCGT 446
BSNT_02732 447 CTATGATGATAAAATGCGCTATTCGAATTTAAGGCTGATACAGGAAATGT 496
.|||||||||||.|||.|.|||||.|||.|..|.||..|.||||||||||
RBAM_016700 447 ATATGATGATAAGATGAGATATTCTAATCTGCGTCTCGTTCAGGAAATGT 496
BSNT_02732 497 GCAAAAATGAGCCTTACGCGCTTCATGTCAATGGTGAAATCGACGATGTT 546
||||||..||.||.||.||.|||||.|||||.||.||..||||.||||||
RBAM_016700 497 GCAAAAGCGAACCGTATGCCCTTCACGTCAACGGCGAGTTCGATGATGTT 546
BSNT_02732 547 GATGACATTACGGCAGAGCAA---TTATACGAAACATACCAAAGCGCTAT 593
||..|||||| ||..|||| ||.||.|||.|.||.||||..||.||
RBAM_016700 547 GAACACATTA---CACCGCAAGATTTGTATGAAGCCTATCAAAAAGCCAT 593
BSNT_02732 594 CCAAAAAGACCAGCTTGATCTATATGTTGTTGGCGACGTGG--ACAGTAA 641
.|...||||.|||||.||.||.||.||..|.|||||.||.| |||| |
RBAM_016700 594 ACGCGAAGATCAGCTGGACCTGTACGTCATCGGCGATGTTGATACAG--A 641
BSNT_02732 642 CCAGGTACAATCGGCAATTGATAAGTATTTCAAAACAGAAGAGC------ 685
.|||||..||.||||..||||||.||||||.|||||.|||||.|
RBAM_016700 642 TCAGGTGAAAACGGCCGTTGATACGTATTTTAAAACGGAAGAACGGGAGC 691
BSNT_02732 686 -GCACTCTTGGCACGATTGAAAACAATCAC-GCTGATGAAAAAGTTCAG- 732
|||..||| ||| |||.||.|.| ||..||||| |||
RBAM_016700 692 TGCAGCCTT-------TTG-AAAGAAGCGCGGCGAATGAA------CAGC 727
BSNT_02732 733 -----CCAAAAGAAGTAATTGATGAAGAGGATGTCAAGCAAGGAAAACTG 777
||.||.|||||.||||||||||||||.||||||||.||.||.|||
RBAM_016700 728 CCGATCCGAAGGAAGTCATTGATGAAGAGGACGTCAAGCAGGGCAAGCTG 777
BSNT_02732 778 AATATCGGCTACCGCACCAGCATCACTTATACAGATCAGGATTATCCTGC 827
|||||.||.|.|||.||||..|..||.||||||||||.||||||||||||
RBAM_016700 778 AATATTGGATTCCGGACCAATACGACATATACAGATCCGGATTATCCTGC 827
BSNT_02732 828 TTTACAAGTGTTTAACGGATTGTTCGGCGGATTCTCTCATTCTAAACTTT 877
.||.||.|||||||||||..|||||||.||.|||||||||||.||.||.|
RBAM_016700 828 ATTGCAGGTGTTTAACGGGCTGTTCGGAGGTTTCTCTCATTCAAAGCTGT 877
BSNT_02732 878 TCATTAATGTTCGGGAAAAAGCCAGTCTTGCTTACTACGCGGCTTCGCGT 927
|.||.|||||.||.||||||||.||.||.||.||.||.||.||.||..|.
RBAM_016700 878 TTATAAATGTCCGTGAAAAAGCGAGCCTCGCCTATTATGCAGCCTCAAGG 927
BSNT_02732 928 ATAGAAAGTTTTAAA-GGCTTGTTAATGGTGATGTCAGGCATTGAAGTGA 976
.|.|||||.||.||| ||||| ||.|||||.|||||.||||||||.||||
RBAM_016700 928 GTGGAAAGCTTCAAAGGGCTT-TTGATGGTCATGTCGGGCATTGAGGTGA 976
BSNT_02732 977 AAAATTTTGAACAGGCGGTTTCGATTATTGCTGAGCAATTCCAGGCAATG 1026
||||||.|.|.|||||.||..|.||.||||..||.||.||.|||||.|||
RBAM_016700 977 AAAATTATAAGCAGGCCGTCACCATCATTGAAGAACAGTTTCAGGCTATG 1026
BSNT_02732 1027 AAAAATGGCGA--TTTCAATGAGCAGGATATAGCACAGACAAAGGCCGTT 1074
.||||.||.|| ||||| ||..|.|||||.||.||.||.||.||||||
RBAM_016700 1027 CAAAACGGTGACTTTTCA--GAAGATGATATCGCCCAAACGAAAGCCGTT 1074
BSNT_02732 1075 ATTCGAAATCAAGTGCTGGAAACGATTGATACAGCATACGGTTTATCTGA 1124
|||..|||||||||..|.|||||.||||||||.||||||||||||.|.||
RBAM_016700 1075 ATTAAAAATCAAGTATTAGAAACCATTGATACGGCATACGGTTTAGCGGA 1124
BSNT_02732 1125 GTTTTTATATCAGCAGGCCGCTGCTCAAGTCGAGATTCCTATCG-AAGAC 1173
.|||.|.||||||||||||.|.||.|||||.|||||.||.|||| ||||
RBAM_016700 1125 ATTTCTGTATCAGCAGGCCTCAGCCCAAGTAGAGATACCGATCGAAAGA- 1173
BSNT_02732 1174 TTTCTTGCAAATATTGAGAATGTCACAAAAGAGGATATCATTAAAGCCGG 1223
||.||||..|||||.|||||.||.|||||||||||.||.||.||.|.|||
RBAM_016700 1174 TTCCTTGACAATATCGAGAAAGTGACAAAAGAGGACATTATCAATGTCGG 1223
BSNT_02732 1224 CGAAAAGATTCAGCTTGATACGACTTATTTCTTAAAAGGGACGGAGGGTG 1273
..|.||.|||.||||.||||||||||||||||||||||||||||.|||.|
RBAM_016700 1224 AAAGAACATTAAGCTGGATACGACTTATTTCTTAAAAGGGACGGGGGGAG 1273
BSNT_02732 1274 CATCTTGA 1281
||||||||
RBAM_016700 1274 CATCTTGA 1281
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.