Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02726 and RBAM_016640
See
Amino acid alignment /
Visit
BSNT_02726 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:40
# Commandline: needle
# -asequence dna-align/BSNT_02726.1.9828.seq
# -bsequence dna-align/RBAM_016640.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02726-RBAM_016640.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02726-RBAM_016640.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02726
# 2: RBAM_016640
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity: 150/222 (67.6%)
# Similarity: 150/222 (67.6%)
# Gaps: 21/222 ( 9.5%)
# Score: 492.0
#
#
#=======================================
BSNT_02726 1 ATGATTCTTTATACCGTGATGCCGCAGGAAATTGT-GTTTGCAGAACAGA 49
|||||.|||||||||||.|||||.||.||| || ||||.| |..|||.
RBAM_016640 1 ATGATCCTTTATACCGTCATGCCCCAAGAA---GTCGTTTAC-GGTCAGG 46
BSNT_02726 50 ACCAAGAGACAAGCGCACATGAGCAAATTGAATATAAAGGTGTACCGCTT 99
|...||||..|||||..|||||.||..|.||.||....||.||.|||||.
RBAM_016640 47 ATATAGAGCAAAGCGTGCATGAACAGGTAGATTACGCCGGCGTGCCGCTG 96
BSNT_02726 100 CTAGTCGAAATGAAAGGGAATGAAGCGGAAGTCATTCAAATCATGAGCAC 149
|||||.||.|||||.||.||||||||.||||||.|.||.||..|.||.||
RBAM_016640 97 CTAGTTGAGATGAAGGGAAATGAAGCTGAAGTCGTACAGATTTTAAGTAC 146
BSNT_02726 150 CAATCCAATGCATTTTCTGCATCCGGACATTTCACCCGGACAA------A 193
.||.||.|||.||||..||.||||||||||..|.||.|||||| |
RBAM_016640 147 GAACCCGATGGATTTCTTGAATCCGGACATCGCTCCGGGACAAAAAATCA 196
BSNT_02726 194 AGCTGAAA--TTAAACGTATAA 213
|||||||| .|||
RBAM_016640 197 AGCTGAAAATCTAA-------- 210
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.