Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02725 and RBAM_016630

See Amino acid alignment / Visit BSNT_02725 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:40
# Commandline: needle
#    -asequence dna-align/BSNT_02725___tepA.1.9828.seq
#    -bsequence dna-align/RBAM_016630___tepA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02725___tepA-RBAM_016630___tepA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02725___tepA-RBAM_016630___tepA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02725___tepA
# 2: RBAM_016630___tepA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 740
# Identity:     596/740 (80.5%)
# Similarity:   596/740 (80.5%)
# Gaps:           4/740 ( 0.5%)
# Score: 2380.0
# 
#
#=======================================

BSNT_02725___      1 ATGGATCATCGTATGGAAAACACAGAAGAAGAGCGTCCTGAAAAAAATGA     50
                     |||||||||||||||||||||||.||||||.|||..||.||||||...||
RBAM_016630__      1 ATGGATCATCGTATGGAAAACACCGAAGAACAGCAGCCCGAAAAATCAGA     50

BSNT_02725___     51 TGCGAAGGACAGCATTATGAATAAAATACAGCAGCTTGGTGAAACGACGC    100
                     ||||||.|||||||||||||..|||||.||||||||.||.||.||..|.|
RBAM_016630__     51 TGCGAAAGACAGCATTATGAGCAAAATTCAGCAGCTGGGAGAGACATCTC    100

BSNT_02725___    101 TTCCGCAGCTGCCCCAAGATACAAATATTCATTGTCTGACCATTATCGGA    150
                     |.|||||..||.||||||||||.||||||||.||.|||||.||.|||||.
RBAM_016630__    101 TGCCGCAAATGTCCCAAGATACCAATATTCACTGCCTGACGATCATCGGC    150

BSNT_02725___    151 CAAATTGAAGGCCATGTTCAGCTTCCTCCGCAAAACAAAACAACAAAATA    200
                     ||||||||.||.||.||.|||||.||.||||||||.||||||||.|||||
RBAM_016630__    151 CAAATTGAGGGGCACGTCCAGCTCCCGCCGCAAAATAAAACAACCAAATA    200

BSNT_02725___    201 TGAACATGTCATCCCGCAGATTGTGGCAATTGAACAAAATCCCAAAATTG    250
                     ||||||.|||||.|||||.||.||.||.|||||.||||||||.|||||.|
RBAM_016630__    201 TGAACACGTCATTCCGCAAATCGTCGCCATTGAGCAAAATCCGAAAATCG    250

BSNT_02725___    251 AAGG-CTTGCTGATCATATTAAATACTGTCGGAGGAGATGTTGAAGCTGG    299
                     |||| ||| ||||||||.|||||.||.||||||||.|||||.|||||.||
RBAM_016630__    251 AAGGACTT-CTGATCATCTTAAACACCGTCGGAGGCGATGTGGAAGCGGG    299

BSNT_02725___    300 TCTTGCAATAGCGGAAATGCTTGCATCTTTATCGAAACCGACCGTTTCTA    349
                     .|||||.||.|||||||||||.|||||.|||||.|||||||||||.||.|
RBAM_016630__    300 GCTTGCGATTGCGGAAATGCTCGCATCCTTATCAAAACCGACCGTCTCAA    349

BSNT_02725___    350 TCGTGCTTGGCGGGGGGCATTCCATCGGCGTTCCGATTGCTGTATCCTGT    399
                     ||||.||.||||||||.||.||.||.||.||.|||||.||.||.||.|||
RBAM_016630__    350 TCGTACTCGGCGGGGGACACTCGATAGGTGTGCCGATCGCCGTGTCATGT    399

BSNT_02725___    400 GATTACAGCTATATCGCCGAAACAGCAACGATGACGATTCATCCAGTTAG    449
                     |||.|.||.|.||||||.||||||||.||.|||||.|||||.||.|||.|
RBAM_016630__    400 GATCATAGTTTTATCGCGGAAACAGCGACTATGACCATTCACCCCGTTCG    449

BSNT_02725___    450 GCTCACCGGGCTGGTCATCGGGGTGCCGCAAACGTTTGAATACTTGGATA    499
                     |||.||.||.|||||.||||||||.||||||||.||||||||||||||.|
RBAM_016630__    450 GCTTACAGGTCTGGTTATCGGGGTTCCGCAAACATTTGAATACTTGGACA    499

BSNT_02725___    500 AGATGCAAGAAAGAGTTGTTAAATTTGTGACAAGCCATTCCAATATAACC    549
                     |.|||||.||..|.||.||.||.||||||||....|||||.|||||..||
RBAM_016630__    500 AAATGCAGGAGCGGGTCGTCAACTTTGTGACCCATCATTCAAATATTTCC    549

BSNT_02725___    550 GAAGAGAAATTTAAAGAGCTAATGTTTTCAAAAGGAAACTTAACACGCGA    599
                     |||||.|||||.||||||||.|||||||||||||||||||||||..|.||
RBAM_016630__    550 GAAGAAAAATTCAAAGAGCTGATGTTTTCAAAAGGAAACTTAACCAGGGA    599

BSNT_02725___    600 TATCGGAACAAATGTAGTCGGTAAGGATGCAGTTAAATACGGATTGATCG    649
                     .|||||.||.||.||||||||.||.|||||.|.|.|.||||||||.||.|
RBAM_016630__    600 CATCGGGACGAACGTAGTCGGGAAAGATGCGGCTGATTACGGATTAATTG    649

BSNT_02725___    650 ATCACGCAGGCGGTGTCGGACAGGCAATCAATAAACTGAATGAGCTCATC    699
                     ||..||..|||||.|||||||||||.||.||.||.||||||.||||.||.
RBAM_016630__    650 ATGCCGTGGGCGGCGTCGGACAGGCGATAAAAAAGCTGAATCAGCTGATT    699

BSNT_02725___    700 GACGAA-GCAAGGAAAGAAGAAGGACGGATGATTCAATGA    738
                     ||.||| |.|||| ..||.||||||.||||||||||||||
RBAM_016630__    700 GAGGAACGAAAGG-GCGAGGAAGGAAGGATGATTCAATGA    738


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