Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02702 and RBAM_016460

See Amino acid alignment / Visit BSNT_02702 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:37
# Commandline: needle
#    -asequence dna-align/BSNT_02702.1.9828.seq
#    -bsequence dna-align/RBAM_016460___ylxQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02702-RBAM_016460___ylxQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02702-RBAM_016460___ylxQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02702
# 2: RBAM_016460___ylxQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     204/303 (67.3%)
# Similarity:   204/303 (67.3%)
# Gaps:          72/303 (23.8%)
# Score: 912.0
# 
#
#=======================================

BSNT_02702         0 --------------------------------------------------      0
                                                                       
RBAM_016460__      1 ATGTCTGGAATGGAATGGTTTCCCTTGCTGGGTCTGGCCAATCGAGCTCG     50

BSNT_02702         1 ----------------------TTGGTAATAAAAGAAATCAGGAATGCGC     28
                                           |||||.|||||||||||.||.|||||||
RBAM_016460__     51 TAAGGTCGTGTCGGGCGAGGACTTGGTTATAAAAGAAATTAGAAATGCGC    100

BSNT_02702        29 GTGCAAAGCTTGTCCTGCTTACAGAGGATGCATCATCTAACACAGCAAAA     78
                     |||||||.|||||.|||||.|||||.||||||||..|.||.||.||||||
RBAM_016460__    101 GTGCAAAACTTGTTCTGCTGACAGAAGATGCATCTGCGAATACTGCAAAA    150

BSNT_02702        79 AAAGTAACTGACAAGTGCAATTATTATAAAGTCCCTTATAAAAAAGTCGA    128
                     ||||||.|.||.||.|||||||||||||||||.|||||||||||||||||
RBAM_016460__    151 AAAGTATCCGATAAATGCAATTATTATAAAGTGCCTTATAAAAAAGTCGA    200

BSNT_02702       129 GAGTCGCGCGGTTCTTGGACGCTCTATCGGTAAAGAAGCCCGTGTCGTTG    178
                     .||.|||||.|.|||.||.|||||||||||.||.|||.|.||||||||||
RBAM_016460__    201 AAGCCGCGCTGATCTCGGCCGCTCTATCGGCAAGGAATCACGTGTCGTTG    250

BSNT_02702       179 TCGCCGTCACTGACCAAGGTTTTGCGAATAAGCTGATCAGCTTGCTCGAT    228
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016460__    251 TCGCCGTCACTGACCAAGGTTTTGCGAATAAGCTGATCAGCTTGCTCGAT    300

BSNT_02702       229 TAA    231
                     |||
RBAM_016460__    301 TAA    303


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