Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02699 and RBAM_016440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:37
# Commandline: needle
# -asequence dna-align/BSNT_02699___nusA.1.9828.seq
# -bsequence dna-align/RBAM_016440___nusA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02699___nusA-RBAM_016440___nusA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02699___nusA-RBAM_016440___nusA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02699___nusA
# 2: RBAM_016440___nusA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1123
# Identity: 945/1123 (84.1%)
# Similarity: 945/1123 (84.1%)
# Gaps: 8/1123 ( 0.7%)
# Score: 4012.5
#
#
#=======================================
BSNT_02699___ 1 ATGAGCAGTGAATTATTAGATGCTCTCACGATTCTTGAAAAAGAAAAAGG 50
||||||||||||.||||||||||||||||.||||||||||||||||||||
RBAM_016440__ 1 ATGAGCAGTGAACTATTAGATGCTCTCACTATTCTTGAAAAAGAAAAAGG 50
BSNT_02699___ 51 CATCAGTAAAGAAATTATCATCGAAGCAATCGAAGCTGCGTTAATTTCTG 100
||||||||||||.|||||||||||||||||.||||||||.||||||||.|
RBAM_016440__ 51 CATCAGTAAAGACATTATCATCGAAGCAATTGAAGCTGCCTTAATTTCCG 100
BSNT_02699___ 101 CTTATAAGCGGAATTTTAATCAAGCGCAAAATGTACGGGTGGATCTAAAC 150
|.||||||||.||||||||.||.||||||||.||||||||.|||||.|||
RBAM_016440__ 101 CGTATAAGCGAAATTTTAACCAGGCGCAAAACGTACGGGTCGATCTGAAC 150
BSNT_02699___ 151 CGTGAAACTGGCTCCATCCGTGTATTTGCAAGAAAAGATGTCGTTGACGA 200
|||||.||.|||.|.|||||.||.||.||||||||.||||||||.|||||
RBAM_016440__ 151 CGTGAGACGGGCACGATCCGCGTGTTCGCAAGAAAGGATGTCGTAGACGA 200
BSNT_02699___ 201 AGTATACGA-CCAGAGATTAGAGATCTCAATTGAAGAGGCGCAGGGCATC 249
.|||||||| .|| |||.|.||.|||||..||||.||.||.|||..||||
RBAM_016440__ 201 GGTATACGATTCA-AGACTTGAAATCTCGCTTGACGACGCTCAGCACATC 249
BSNT_02699___ 250 CATCCGGAATATATGGTCGGCGATGTCGTCGAAATCGAAGTTACACCTAA 299
||||||.|.||..|.|||||.||||||||.|||||.|||||.||.||.||
RBAM_016440__ 250 CATCCGAACTACCTTGTCGGAGATGTCGTTGAAATAGAAGTAACGCCGAA 299
BSNT_02699___ 300 GGATTTCGGGCGCATAGCTGCTCAAACAGCGAAGCAGGTCGTTACACAGC 349
.||.|||||.|||||.|||||.||.||.|||||.||.||.||.||.||||
RBAM_016440__ 300 AGACTTCGGCCGCATTGCTGCGCAGACGGCGAAACAAGTGGTGACGCAGC 349
BSNT_02699___ 350 GTGTGCGCGAAGCTGAGCGCGGTGTGATTTATTCTGAATTTATCGACCGT 399
||||.||.||||||||||||||.||||||||.||.|||||||||||.|||
RBAM_016440__ 350 GTGTCCGTGAAGCTGAGCGCGGCGTGATTTACTCAGAATTTATCGATCGT 399
BSNT_02699___ 400 GAAGAAGACATCATGACAGGGATCGTCCAGCGTCTGGACAATAAATTTAT 449
|||||||||||||||||.||.||.||.|||||..|.||||..||.|||||
RBAM_016440__ 400 GAAGAAGACATCATGACGGGAATTGTACAGCGCTTAGACAGCAAGTTTAT 449
BSNT_02699___ 450 CTACGTGTCTTTAGGCAAAATCGAAGCCTTGCTGCCGGTTAATGAGCAAA 499
.|||||||||.|.|||||.||.|||||..|||||||.||.|||||.||.|
RBAM_016440__ 450 TTACGTGTCTCTCGGCAAGATTGAAGCGCTGCTGCCCGTCAATGAACAGA 499
BSNT_02699___ 500 TGCCGAATGAAAGCTACAAACCTCATGACCGCATTAAGGTATATATCACA 549
||||||||||.|||||.|||||.||.||.||.|||||.||||.|||||||
RBAM_016440__ 500 TGCCGAATGAGAGCTATAAACCGCACGATCGGATTAAAGTATTTATCACA 549
BSNT_02699___ 550 AAAGTAGAAAAAACAACGAAGGGCCCGCAGATTTATGTGTCAAGAACACA 599
|||||.||||||||.||.||.||.||.|||||.|||||.||||||||.||
RBAM_016440__ 550 AAAGTCGAAAAAACGACAAAAGGGCCTCAGATCTATGTATCAAGAACGCA 599
BSNT_02699___ 600 TCCAGGCCTGTTAAAGCGTTTGTTTGAAATTGAAGTGCCTGAAATTTATG 649
|||.||.|||||.||||||.|.||||||||.||||||||.||||||||||
RBAM_016440__ 600 TCCTGGTCTGTTGAAGCGTCTTTTTGAAATCGAAGTGCCGGAAATTTATG 649
BSNT_02699___ 650 ATGGAACTGTCGAGCTAAAATCTGTTGCCAGAGAAGCCGGCGACCGTTCA 699
|.|||||.|||||.||.|||||.||||||||||||||.||||||||.||.
RBAM_016440__ 650 ACGGAACGGTCGAACTGAAATCCGTTGCCAGAGAAGCGGGCGACCGCTCT 699
BSNT_02699___ 700 AAAATTTCTGTTCGCACAGATGATCCTGACGTGGATCCTGTCGGTTCATG 749
|||||.||.||.|||||.||||||||||||||.|||||.|||||||||||
RBAM_016440__ 700 AAAATCTCCGTCCGCACTGATGATCCTGACGTTGATCCGGTCGGTTCATG 749
BSNT_02699___ 750 CGTAGGGCCTAAAGGCCAGCGTGTGCAAGCAATCGTCAATGAATTAAAAG 799
|||.||.||||||||||||||.|||||.||.||||||||||||.|.||||
RBAM_016440__ 750 CGTCGGTCCTAAAGGCCAGCGCGTGCAGGCGATCGTCAATGAACTGAAAG 799
BSNT_02699___ 800 GTGAAAAAATTGACATTGTCAACTGGTCCAGTGATCCTGTAGAATTTGTC 849
|.|||||||||||.||.|||||||||||...||||||.||.||||||||.
RBAM_016440__ 800 GCGAAAAAATTGATATCGTCAACTGGTCTGATGATCCGGTTGAATTTGTT 849
BSNT_02699___ 850 GCGAATGCGCTCAGCCCTTCCAAAGTGCTTGATGTCATTGTTAATGAAGA 899
||.||||||||||||||.||.||||||||.||||||||.||.|..|||||
RBAM_016440__ 850 GCCAATGCGCTCAGCCCGTCTAAAGTGCTGGATGTCATCGTCAGCGAAGA 899
BSNT_02699___ 900 AGAAAAAGCGACAACTGTTATTGTTCCTGATTACCAGCTGTCTCTGGCAA 949
|||||||||.||.|||||.||.|||||||||||||||||.||||||||||
RBAM_016440__ 900 AGAAAAAGCCACGACTGTCATCGTTCCTGATTACCAGCTTTCTCTGGCAA 949
BSNT_02699___ 950 TTGGCAAAAGAGGACAAAACGCACGCTTAGCTGCTAAACTGACAGGCTGG 999
|.||.||||||||.||||||||.|||||||||||.|||||||||||||||
RBAM_016440__ 950 TCGGAAAAAGAGGGCAAAACGCCCGCTTAGCTGCGAAACTGACAGGCTGG 999
BSNT_02699___ 1000 AAGATTGATATTAAGAGCGAAACGGACGCAAGAGAACTTGGAATCTATCC 1049
||.||.|||||.||.||.||||||||.||||||||.|||||.||||||||
RBAM_016440__ 1000 AAAATCGATATCAAAAGTGAAACGGATGCAAGAGACCTTGGCATCTATCC 1049
BSNT_02699___ 1050 GAGAGAACTTGAAGAAGATGA------TGAGCCGCTCTTTACGGAGCCTG 1093
||||||.|.|||||||||||| .|||||||||||||.||||||||
RBAM_016440__ 1050 GAGAGAGCATGAAGAAGATGACGATTTAGAGCCGCTCTTTATGGAGCCTG 1099
BSNT_02699___ 1094 AAACTGCTGAATCGGATGAATAA 1116
||||.||.|||||||||||||||
RBAM_016440__ 1100 AAACAGCCGAATCGGATGAATAA 1122
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