Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02694 and RBAM_016400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:36
# Commandline: needle
# -asequence dna-align/BSNT_02694___yluC.1.9828.seq
# -bsequence dna-align/RBAM_016400___yluC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02694___yluC-RBAM_016400___yluC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02694___yluC-RBAM_016400___yluC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02694___yluC
# 2: RBAM_016400___yluC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1264
# Identity: 1051/1264 (83.1%)
# Similarity: 1051/1264 (83.1%)
# Gaps: 2/1264 ( 0.2%)
# Score: 4391.0
#
#
#=======================================
BSNT_02694___ 1 GTGAATACAGTTATAGCGTTTATCATTATTTTCGGAACGCTCGTTTTCTT 50
||||||||||||||.||||||||.|||||||||||||||||||||||.||
RBAM_016400__ 1 GTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTT 50
BSNT_02694___ 51 CCATGAACTGGGCCATTTATTGCTAGCCCAAAGAGCGGGAATTCTCTGCC 100
||||||.||.||.|||||||||||.|||||||||||||||||.||.||||
RBAM_016400__ 51 CCATGAGCTCGGGCATTTATTGCTCGCCCAAAGAGCGGGAATCCTTTGCC 100
BSNT_02694___ 101 GTGAATTTGCGATCGGCTTCGGTCCAAAGATTTTTTCTTTCAAAAAAAAT 150
||||||||||||||||||||||.||.||.||.|||||.||.|||||.|||
RBAM_016400__ 101 GTGAATTTGCGATCGGCTTCGGCCCTAAAATCTTTTCATTTAAAAAGAAT 150
BSNT_02694___ 151 GAAACAGTTTATACGATCAGGCTGCTTCCGGTCGGCGGATTTGTTCGTAT 200
|||||.||.|||||||||||.||.||||||||||||||.||.||.||.||
RBAM_016400__ 151 GAAACCGTGTATACGATCAGACTCCTTCCGGTCGGCGGGTTCGTCCGCAT 200
BSNT_02694___ 201 GGCCGGCGAAGATCCGGAAATGATTGAGGTGAAACCCGGATACACGGTCG 250
||||||.|||||.|||||.|||||.||.||.||||||||.||.||.||||
RBAM_016400__ 201 GGCCGGTGAAGACCCGGAGATGATCGAAGTCAAACCCGGTTATACCGTCG 250
BSNT_02694___ 251 GGCTTCTGTTTAATAAGGAAGATCAAGTTGAGAAAGTCATCATCAATCAA 300
|||||||.||||||||.||.||..||||.||.|||||||||||.||||||
RBAM_016400__ 251 GGCTTCTTTTTAATAAAGATGACGAAGTGGAAAAAGTCATCATTAATCAA 300
BSNT_02694___ 301 AAGGAAAAATATCCGGATGCTTTAGTCATTGAAGTGGAAACAGCGGATTT 350
||||||||||||||.||.||||||.|.|||||.|||||.||.||.|||.|
RBAM_016400__ 301 AAGGAAAAATATCCCGACGCTTTAATTATTGAGGTGGAGACGGCTGATCT 350
BSNT_02694___ 351 AGAGCATGACATGAAGATCACCGGTTATGAACAGGGGAAAGAGGACGAAC 400
.|||||.||.||||||||.|||||.||.||.|||||||||||.||.||||
RBAM_016400__ 351 TGAGCACGAAATGAAGATTACCGGGTACGAGCAGGGGAAAGAAGATGAAC 400
BSNT_02694___ 401 TTTCCAGCTTTACTGTCAGCGAAACATCCTTTTTTATTGTAGACGGAGAA 450
|..|..|||||||||||||..|.||.|||||||||||.||||||||||||
RBAM_016400__ 401 TGGCGGGCTTTACTGTCAGTCAGACCTCCTTTTTTATCGTAGACGGAGAA 450
BSNT_02694___ 451 GAAGTGCAGATTGCGCCGTATAATCGCCAATTTGGTTCCAAACCTGTGTG 500
|||||||||||||||||.||.|||||.|||||.||.||.|||||.||.||
RBAM_016400__ 451 GAAGTGCAGATTGCGCCTTACAATCGACAATTCGGGTCTAAACCCGTATG 500
BSNT_02694___ 501 GCAGCGGATTAAAGCAATTGCTGCAGGGCCGATTATGAACTTTATTTTAG 550
|.||||||||||.||.||||||||.||.|||||.||||||||.||.||||
RBAM_016400__ 501 GAAGCGGATTAAGGCGATTGCTGCCGGTCCGATAATGAACTTCATCTTAG 550
BSNT_02694___ 551 CTTACGTCATTTTAGTGATGCTTGGGCTGATTCAAGGCGTACCGTCAAAT 600
|.||.||||||.|.||.|||||.||..|.|||||||||||.||.||.|||
RBAM_016400__ 551 CGTATGTCATTCTCGTCATGCTCGGATTCATTCAAGGCGTGCCTTCGAAT 600
BSNT_02694___ 601 GAACCTATGCTCGGGCAGCTGACAGACAATGGACGGGCAGCTGAAGCAGG 650
.|.|||..|||||||.|||||||||||||||||||.|||||.|..||.||
RBAM_016400__ 601 CAGCCTGAGCTCGGGAAGCTGACAGACAATGGACGCGCAGCGGCTGCCGG 650
BSNT_02694___ 651 GCTAAAAGAAGGGGATTATATCCAAAGCATTAACGGAGAGAAAATGAGGT 700
..||||||||||.||.||||||||.|||||||||||.||.|||||||.||
RBAM_016400__ 651 TTTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAAATGATGT 700
BSNT_02694___ 701 CTTGGACTGACATTGTCTCCGCTGTAAAAGAAAA-CCCGGAGAAAGAAAT 749
|.|||||.|||||.||..|.||.||||||||||| |||||| |||.||||
RBAM_016400__ 701 CATGGACCGACATCGTGACAGCGGTAAAAGAAAATCCCGGA-AAAAAAAT 749
BSNT_02694___ 750 GGACGTTGCAGTAAAAAGAGATAACAAAACGCTTCATATTTCGGTGACTC 799
.||.||.||.||.|||.|.||...||||.||.|||||||.|||||.||.|
RBAM_016400__ 750 CGATGTCGCCGTCAAACGGGACGGCAAATCGTTTCATATCTCGGTTACAC 799
BSNT_02694___ 800 CGGAAGCTGTTAAAGATGAGAACAAAAAAACAATCGGACGTTTCGGTTCC 849
|.||||||||.||||||||.||.||||||||||||||.||.|||||.||.
RBAM_016400__ 800 CTGAAGCTGTAAAAGATGAAAATAAAAAAACAATCGGCCGCTTCGGCTCT 849
BSNT_02694___ 850 TATGCGCCGACTGAAAAAGGCGTACTCTCAGCGGTTGCTTACGGCGCGAC 899
||||||||||||||||||||||..||..|||||.||||.||.||||||||
RBAM_016400__ 850 TATGCGCCGACTGAAAAAGGCGCGCTTGCAGCGATTGCCTATGGCGCGAC 899
BSNT_02694___ 900 ATCAACAGTTGATGTCACCAAAGCCATTTTAACCAATCTGAGCAAATTAG 949
|||.||.|||||||||||.|||||.|||.|.|||||||||||||||.|.|
RBAM_016400__ 900 ATCTACCGTTGATGTCACAAAAGCGATTCTGACCAATCTGAGCAAACTTG 949
BSNT_02694___ 950 TAACAGGCCAATTTAAACTCGATATGCTGTCAGGTCCTGTCGGCATATAT 999
|.||||||||.|||||.||.||||||||.||.||||||||||||||.|||
RBAM_016400__ 950 TGACAGGCCAGTTTAAGCTTGATATGCTTTCGGGTCCTGTCGGCATTTAT 999
BSNT_02694___ 1000 GACATGACAGACCAAGTGGCGAAAACAGGGATCGTGAATTTATTTCAGTT 1049
||.|||||.||.|||||.||.|||||.||.||..|.||..||||.|||||
RBAM_016400__ 1000 GATATGACGGATCAAGTTGCAAAAACCGGTATTATCAACCTATTCCAGTT 1049
BSNT_02694___ 1050 TGCGGCGTTTTTAAGCATTAATCTTGGGATTGTCAACCTGCTTCCGATTC 1099
||||||||||||||||||.||.||.||.||||||||||||||.|||||.|
RBAM_016400__ 1050 TGCGGCGTTTTTAAGCATCAACCTGGGAATTGTCAACCTGCTGCCGATAC 1099
BSNT_02694___ 1100 CGGCACTTGACGGAGGAAGACTGTTGTTTCTATTTATTGAAGCGATTCGG 1149
||||.||||||||.||..|.|||.|||||.||||.||||||||.||.||.
RBAM_016400__ 1100 CGGCGCTTGACGGCGGGCGGCTGCTGTTTTTATTCATTGAAGCAATCCGC 1149
BSNT_02694___ 1150 GGCAAACCGATTAACAGGGAAAAAGAAGCATTTGTTGTGTTTATCGGAGT 1199
|||||.|||||.|||.|.||.||.|||||||||||.||.||||||||.||
RBAM_016400__ 1150 GGCAAGCCGATAAACCGTGACAAGGAAGCATTTGTCGTATTTATCGGCGT 1199
BSNT_02694___ 1200 AGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGC 1249
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016400__ 1200 AGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGC 1249
BSNT_02694___ 1250 GGCTGTTTTTGTAA 1263
|..|.||.||.|||
RBAM_016400__ 1250 GTTTATTCTTATAA 1263
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