Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02661 and RBAM_016150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:33
# Commandline: needle
# -asequence dna-align/BSNT_02661___fliM.1.9828.seq
# -bsequence dna-align/RBAM_016150___fliM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02661___fliM-RBAM_016150___fliM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02661___fliM-RBAM_016150___fliM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02661___fliM
# 2: RBAM_016150___fliM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1004
# Identity: 843/1004 (84.0%)
# Similarity: 843/1004 (84.0%)
# Gaps: 10/1004 ( 1.0%)
# Score: 3568.0
#
#
#=======================================
BSNT_02661___ 1 ATGTCAGGAGAAGTTCTCTCCCAAAATGAAATAGATGCACTGCTTTCTGC 50
|||||||||||||||||||||||||||||||||||.|||||||||||.||
RBAM_016150__ 1 ATGTCAGGAGAAGTTCTCTCCCAAAATGAAATAGACGCACTGCTTTCCGC 50
BSNT_02661___ 51 AATATCAACAGGTGAAATGGACGCTGAAGAGCTGAAAAAAGAAGAAAAAG 100
.||.||.||.|||||...|||.||.||||||||||||||.||||..||||
RBAM_016150__ 51 CATTTCCACGGGTGAGGCGGATGCGGAAGAGCTGAAAAAGGAAGTTAAAG 100
BSNT_02661___ 101 AGAAGAAAGTCAAGGTTTATGATTTCAAACGTGCGCTGCGGTTTTCTAAG 150
||||.|||||.|||||.||||||||.|||||.||.||..|.||.||.||.
RBAM_016150__ 101 AGAAAAAAGTAAAGGTATATGATTTTAAACGGGCTCTCAGATTCTCGAAA 150
BSNT_02661___ 151 GATCAGATCCGCAGTTTAACGAGAATTCATGACAATTTTGCAAGACTTCT 200
||||||||.|||||||||||..|.||.|||||.||.|||||.||.|||||
RBAM_016150__ 151 GATCAGATACGCAGTTTAACCCGGATACATGATAACTTTGCGAGGCTTCT 200
BSNT_02661___ 201 TACCACTCATTTTTCTGCTCAGCTCAGAACCTATATTCACATATCTGTCA 250
.||.||.||.|||||.||..||||||||||.||||||||.|||||.||||
RBAM_016150__ 201 CACAACACACTTTTCCGCCAAGCTCAGAACGTATATTCATATATCCGTCA 250
BSNT_02661___ 251 GTTCTGTTGACCAGGTCCCGTATGAGGAATTTATCAGATCGATCCCGAAC 300
|.||.|||||||||||.||||||||.|||||||||.|.||.||.||||||
RBAM_016150__ 251 GCTCAGTTGACCAGGTGCCGTATGAAGAATTTATCCGTTCCATACCGAAC 300
BSNT_02661___ 301 ATGACGATTCTGAATCTATTTGATGTCCATCCGATGGAAGGCAGAATTAT 350
|||||||||.|.|||.||||.|||||.||||||||||||||||||||.||
RBAM_016150__ 301 ATGACGATTTTAAATTTATTCGATGTTCATCCGATGGAAGGCAGAATCAT 350
BSNT_02661___ 351 GATGGAGGTCAACCCCACGATAGCTTATACG--ATGATGGATCGGGTCAT 398
|||||||||.||.|||||.||.|| ||||| |||.|.||.||.|||||
RBAM_016150__ 351 GATGGAGGTTAATCCCACTATCGC--ATACGCAATGCTTGACCGCGTCAT 398
BSNT_02661___ 399 GGGCGGGATTGGAATCAGTCATAACAAGGTTGACAGTTTGACAGAAATTG 448
|||.||.||.||.||||.|||||||||.|.||||||..|.||.|||||||
RBAM_016150__ 399 GGGAGGCATCGGCATCACTCATAACAAAGCTGACAGCCTTACGGAAATTG 448
BSNT_02661___ 449 AAACAAAAATCATTTCTAATTTATTTGAAAATGCACTGGGTAATTATAAA 498
||||.||.||.||||||||.||||||||||||||||||||.||.||.|||
RBAM_016150__ 449 AAACGAATATTATTTCTAACTTATTTGAAAATGCACTGGGCAACTACAAA 498
BSNT_02661___ 499 GAAGCTTGGCAGTCAATTGCTGATATTGAACCGGAAATGACTGAGTTTGA 548
|||||||||||.||.||||||||||||||.||.|||||||||||.|||||
RBAM_016150__ 499 GAAGCTTGGCAATCGATTGCTGATATTGACCCTGAAATGACTGAATTTGA 548
BSNT_02661___ 549 AGTGAATCCGCAATTTGTTCAGATGGTATCTCCTAATGAAACAGTCGTGG 598
|||||||||.||.|||||.||||||||.||.||.||||||||||||||.|
RBAM_016150__ 549 AGTGAATCCTCAGTTTGTACAGATGGTTTCCCCAAATGAAACAGTCGTTG 598
BSNT_02661___ 599 TGATCTCGCTCAATACTCAAATTGGTGAAATCAGCGGTGTCATTAATCTC 648
|.||.||.||||||||.||.||.||||||||||||||||||||||||||.
RBAM_016150__ 599 TCATTTCTCTCAATACACAGATAGGTGAAATCAGCGGTGTCATTAATCTT 648
BSNT_02661___ 649 TGTATCCCGCATATCGTACTCGAGCCGCTCATACCGAAGCTTTCAGTCCA 698
|||||.||.|||.|||||||.||||||.|.||.||.||||||||.||.||
RBAM_016150__ 649 TGTATTCCCCATGTCGTACTTGAGCCGATTATCCCTAAGCTTTCCGTACA 698
BSNT_02661___ 699 CTATTGGATGCAATCAGACCGAAATGAGCCAAAGCCTGAGGAAACAAAGT 748
.||||||||||||||||||||.|||||..|.|||||.||.|||||.||||
RBAM_016150__ 699 TTATTGGATGCAATCAGACCGGAATGAAGCGAAGCCCGAAGAAACGAAGT 748
BSNT_02661___ 749 CGCTTGAAAAACGTATCATGACAGCACAAATACCTGTCGTGGCCGAGCTC 798
.|||||||||.||.||||||||.||.|||||.||.||.||||| .|||
RBAM_016150__ 749 TGCTTGAAAAGCGCATCATGACGGCTCAAATTCCCGTTGTGGC---TCTC 795
BSNT_02661___ 799 ---GGCACATCTGAACTGACGATAGAAGAGTTTTTAAGTTTAGAAGTCGG 845
|||.|.|||||||||||.||||||||.|||||||||||.||||||||
RBAM_016150__ 796 TTGGGCGCTTCTGAACTGACAATAGAAGAATTTTTAAGTTTGGAAGTCGG 845
BSNT_02661___ 846 AGACTGCATAACTTTGGACAAATCAGTCACGGATCCTCTTACTGTATTGG 895
.|||||.||||||.|||||||||||||.||.|||||||||||||||||||
RBAM_016150__ 846 GGACTGTATAACTCTGGACAAATCAGTGACTGATCCTCTTACTGTATTGG 895
BSNT_02661___ 896 TCGGAGATAAGCCGAAATTTTTAGGACAAGCCGGCCGGGTGAATCGAAAA 945
|||||.|.||.|||||.||||||||.||.|||||||||||||||||||.|
RBAM_016150__ 896 TCGGAAACAAACCGAAGTTTTTAGGGCAGGCCGGCCGGGTGAATCGAAGA 945
BSNT_02661___ 946 CAGGCAGTGCAAATTTTAGATCACGACATAAGAGGTGAACAAGATGGAGA 995
||||||||||||||||||||||||||||||||||||||||||||||.|.|
RBAM_016150__ 946 CAGGCAGTGCAAATTTTAGATCACGACATAAGAGGTGAACAAGATGAACA 995
BSNT_02661___ 996 ATAA 999
|||.
RBAM_016150__ 996 ATAG 999
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