Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02656 and RBAM_016120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence dna-align/BSNT_02656___flgG.1.9828.seq
# -bsequence dna-align/RBAM_016120___flgG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02656___flgG-RBAM_016120___flgG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02656___flgG-RBAM_016120___flgG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02656___flgG
# 2: RBAM_016120___flgG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 822
# Identity: 579/822 (70.4%)
# Similarity: 579/822 (70.4%)
# Gaps: 72/822 ( 8.8%)
# Score: 1909.0
#
#
#=======================================
BSNT_02656___ 1 ATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAGAACTTTCAAAC 50
||||||||||||.|.|||||.||.||||||||.|||||.||||||||.||
RBAM_016120__ 1 ATGTTACGTTCATTATATTCCGGTATCAGCGGCATGAAAAACTTTCAGAC 50
BSNT_02656___ 51 AAAGCTTGACGTAATCGGTAACAACATTGCCAACGTAAATACAGTAGGAT 100
|||.||.||.||||||||.||.|||||.||||||||.||.|||||.||||
RBAM_016120__ 51 AAAACTAGATGTAATCGGCAATAACATCGCCAACGTCAACACAGTGGGAT 100
BSNT_02656___ 101 TCAAAAAGAGCCGTGTGACCTTTAAAGATATGGTAAGCCAAACGATTGCC 150
|.||.||.|||||.||.||.||||||||||||.|.|||||.||..|.|||
RBAM_016120__ 101 TTAAGAAAAGCCGCGTTACATTTAAAGATATGATCAGCCAGACAGTCGCC 150
BSNT_02656___ 151 GGCGGTTCTGCTGCTGGTGCAACAATCG-GCGGAACAAACTCTAAGCAAA 199
||||||| |||.|| | ||.||.||.||.||||
RBAM_016120__ 151 GGCGGTT---------------CAAACGTG----ACCAATTCAAAACAAA 181
BSNT_02656___ 200 TCGGTTTAGGTTC----ATCATCTGGCACAATTGATACAATTCATTCAAC 245
||||.||.|||.| | |.||| .|.||||||....||||||||||
RBAM_016120__ 182 TCGGCTTGGGTGCCGCGA-CTTCT---TCCATTGATGTTGTTCATTCAAC 227
BSNT_02656___ 246 AAGCGCGACACAAAG----CACAGGAAGAACACTTGATTTAGCAATTGAC 291
..|||| |.|..|| |||| |||.||.|| .||..||||.||||||
RBAM_016120__ 228 CGGCGC--CCCGCAGGCTACACA-GAATAAAAC-CGACCTAGCCATTGAC 273
BSNT_02656___ 292 GGCGACGGTTACTTCCGAATTGATACAGGTGACGGGACA--GCTTATACA 339
||.|||||.|||||.|..|||.||||||||| ||||| | |.|||.|||
RBAM_016120__ 274 GGAGACGGCTACTTTCAGATTAATACAGGTG-CGGGA-ATTGTTTACACA 321
BSNT_02656___ 340 AGAGCAGGGAACTTCTATTTAGATAAT-ACCGGAACACTGGTTACAGGTG 388
.|.||.|||||.|||......||.||| |..||||| ||.|||||...||
RBAM_016120__ 322 CGTGCGGGGAATTTCGGAAAGGACAATCAAGGGAAC-CTTGTTACGACTG 370
BSNT_02656___ 389 ATGGCTACCATGTGTTAAATATGAAT----GGGGGAACAATTAAAATTCC 434
|.||.|||.||.|...||| ||| ||.||.|.|||.||.|||||
RBAM_016120__ 371 ACGGGTACTATCTTGAAAA----AATCGGCGGCGGCAAAATCAATATTCC 416
BSNT_02656___ 435 TACTGATGCTCAAAGCTT-TAGCATTGGTTCTGATGGAAAGGTGTCAATT 483
.|||||||| .||||.|| .|||||.|||.|.||.||||..||..||
RBAM_016120__ 417 GACTGATGC-GAAAGATTACAGCATCGGTGCAGACGGAACCGTTACA--- 462
BSNT_02656___ 484 GT----TGATGCTGAGGGGA--AAACACAAGACGGGGGACAAATCGGGAT 527
| |||||| |||||| |....||.||.|..|||||||||||..|
RBAM_016120__ 463 -TACACTGATGC--AGGGGATGAGGTTCATGATGCCGGACAAATCGGTTT 509
BSNT_02656___ 528 TGTTACTTTTGCCAACAGTGATGGATTGGATAAAATCGGAAGAAACCTAT 577
.||.||.||..|.|||||.|..||..||||.|||||||||.|.|||||.|
RBAM_016120__ 510 GGTCACGTTCCCTAACAGCGCCGGTCTGGAAAAAATCGGAGGCAACCTTT 559
BSNT_02656___ 578 ACCGTGAATCTTTAAACTCTGGAACGGCCAGTGCAG-CGAACCA-GCCTG 625
||.|.|||||.||||..||.|||.|.||.||.|||| | |||| .||.|
RBAM_016120__ 560 ACAGAGAATCATTAAGTTCAGGAGCTGCGAGCGCAGTC--ACCACTCCGG 607
BSNT_02656___ 626 GTGACGGCGGAACTGGT--GCTCTTAAATCAGGATTTCTCGAAATGTCTA 673
|.||...||||||.||| |||.|| ..||||.|.|||.||||||||.|
RBAM_016120__ 608 GCGAAAACGGAACGGGTAAGCTTTT--GGCAGGCTATCTTGAAATGTCAA 655
BSNT_02656___ 674 ACGTCGATTTAACTGACGAATTTACTGAAATGATCGTAGCCCAGCGCGGA 723
||||.|||.|.||.||.||||||||.|||||||||||.||.|||||.||.
RBAM_016120__ 656 ACGTAGATCTGACAGATGAATTTACCGAAATGATCGTTGCTCAGCGGGGT 705
BSNT_02656___ 724 TTCCAATCAAACTCAAAAATTATTACAACATCTGATGAAATCCTTCAAGA 773
||||||||||||||||||||.|||||.||.||.||||||||||||||.||
RBAM_016120__ 706 TTCCAATCAAACTCAAAAATCATTACGACTTCAGATGAAATCCTTCAGGA 755
BSNT_02656___ 774 ACTGGTTAACCTTAAACGTTAA 795
.||||||||.||.|||||.|||
RBAM_016120__ 756 GCTGGTTAATCTGAAACGGTAA 777
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