Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02647 and RBAM_016070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence dna-align/BSNT_02647___fliI.1.9828.seq
# -bsequence dna-align/RBAM_016070___fliI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02647___fliI-RBAM_016070___fliI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02647___fliI-RBAM_016070___fliI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02647___fliI
# 2: RBAM_016070___fliI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1321
# Identity: 1052/1321 (79.6%)
# Similarity: 1052/1321 (79.6%)
# Gaps: 8/1321 ( 0.6%)
# Score: 4174.0
#
#
#=======================================
BSNT_02647___ 1 ATGAAGACACAGAGTCTGATAGATTGTATAGAAATGACAGACTCGTATAA 50
||||||||||||..|.|.|||||.|..||.||||...|.||..||||.||
RBAM_016070__ 1 ATGAAGACACAGTATTTAATAGACTCAATTGAAACAGCGGATCCGTACAA 50
BSNT_02647___ 51 ACGGTACGGAAAAGTCAAGCGGGTAATCGGCCTGATGATTGAATCAAAAG 100
.||.|||||.||.||.||.|||||.|||||.|||||||||||||||||||
RBAM_016070__ 51 GCGCTACGGCAAGGTTAAACGGGTCATCGGGCTGATGATTGAATCAAAAG 100
BSNT_02647___ 101 GGCCAGCAAGCTCAATTGGCGACGTGTGCCTGATTTATGCAAAAGGACAA 150
||||.|.|||||||||.||.||.||.||.||.||||||.|.|||||.||
RBAM_016070__ 101 GGCCCGAAAGCTCAATCGGAGATGTTTGTCTCATTTATCCGAAAGGCCA- 149
BSNT_02647___ 151 TCTGGG---AAAGTCATTAAAGCTGAGGTAGTCGGCTTCCAGGAAGAAAA 197
||.| ||||..||||||||||||||.||.||||||||.||.||.||
RBAM_016070__ 150 --TGCGAAAAAAGCGATTAAAGCTGAGGTTGTAGGCTTCCAAGATGAGAA 197
BSNT_02647___ 198 TATTTTGCTTATGCCTTATTTAGAGGCTGCGAGCATTGCACCTGGCAGCA 247
.|||.||.|.|||||||||.|.||.||.||.||||||||.||.|||||||
RBAM_016070__ 198 CATTCTGTTAATGCCTTATCTGGAAGCGGCCAGCATTGCGCCGGGCAGCA 247
BSNT_02647___ 248 TTGTAGAAGCTACTGGGGAATCACTTCGGGTTAAAGTTGGGACCGGACTG 297
||||.||.||.||||||||.||.||.||..|.|||||.||..|.||..|.
RBAM_016070__ 248 TTGTGGAGGCCACTGGGGAGTCGCTCCGCATCAAAGTAGGCGCGGGTTTA 297
BSNT_02647___ 298 ATCGGACAAGTCATCGATGCTTTTGGAGAACCGCTTGACGGAAAGCTTCT 347
|||||||||||..||||.||.||.||.|||||.||||||||...|...||
RBAM_016070__ 298 ATCGGACAAGTTGTCGACGCGTTCGGCGAACCTCTTGACGGCCGGGCGCT 347
BSNT_02647___ 348 GCCGAAAGGGCTTTCGCCTGTATCAACGGAGCAATCACCGCCCAACCCGA 397
.||||||||..|.||.||.||.||.|||||.||..|.|||||.|||||||
RBAM_016070__ 348 TCCGAAAGGTTTGTCCCCCGTTTCGACGGAACAGCCGCCGCCAAACCCGA 397
BSNT_02647___ 398 TGAAACGGCCGCCTATCCGTGAAAAGATGGGTGTTGGAGTCAGATCAATT 447
|||||||.|||||.||.||.||||||||||||||.||.||||||||.|||
RBAM_016070__ 398 TGAAACGCCCGCCGATACGGGAAAAGATGGGTGTCGGTGTCAGATCGATT 447
BSNT_02647___ 448 GACAGCTTGCTGACAGTCGGTAAAGGCCAGCGGATTGGAATTTTTGCAGG 497
|||||..|||||||.||.||.|||||.|||.|.||.||.||||||||.||
RBAM_016070__ 448 GACAGTCTGCTGACGGTAGGAAAAGGGCAGAGAATCGGGATTTTTGCCGG 497
BSNT_02647___ 498 AAGCGGTGTTGGAAAAAGCACCTTAATGGGGATGATCGCCAAGCAGACAG 547
||||||.||.||||||||||||.|.|||||.||||||||.||||||||.|
RBAM_016070__ 498 AAGCGGAGTCGGAAAAAGCACCCTGATGGGAATGATCGCGAAGCAGACTG 547
BSNT_02647___ 548 AGGCTGACTTAAACGTCATTGCACTTGTCGGAGAACGCGGACGAGAGGTT 597
|.|||||.||||||.|.||.|||||.|||||.|||||.||.||.|||||.
RBAM_016070__ 548 AAGCTGATTTAAACATTATCGCACTCGTCGGGGAACGGGGGCGCGAGGTG 597
BSNT_02647___ 598 CGGGAGTTTATTGAAAAAGATCTGGGGAAAGAGGGGCTGAAACGATCGAT 647
||.||.||.||.||.||.|||.|.||..||||.||.||||||||.|||||
RBAM_016070__ 598 CGTGAATTCATCGAGAAGGATTTAGGCGAAGAAGGCCTGAAACGCTCGAT 647
BSNT_02647___ 648 TGTAGTCGTTGCCACCTCAGACCAGCCAGCATTAATGAGATTGAAAGCGG 697
.||.||.||.||.|||||.||.|||||.||.||||||.|.||||||||||
RBAM_016070__ 648 AGTCGTAGTCGCGACCTCTGATCAGCCTGCCTTAATGCGTTTGAAAGCGG 697
BSNT_02647___ 698 CATATACAGCGACTGCCATTGCCGAGTATTTCCGAGATAAAGGCCAAAAT 747
|.|||||.||.||.||||||||.|||||.|||||.||||||||||..|||
RBAM_016070__ 698 CGTATACGGCCACCGCCATTGCAGAGTACTTCCGGGATAAAGGCCGGAAT 747
BSNT_02647___ 748 GTCATGTTTATGATGGATTCTGTTACAAGGGTGGCAATGGCGCAGCGAGA 797
||.|||||.||||||||.|||||.||.|||||.||.|||||.|||||.||
RBAM_016070__ 748 GTGATGTTCATGATGGACTCTGTCACGAGGGTCGCGATGGCTCAGCGGGA 797
BSNT_02647___ 798 GATTGGACTGGCTGCAGGAGAGCCTCCGACGACAAAAGGTTATACACCTT 847
.||.||.|||||.||.|||||.||.|||||.||||||||.||||||||||
RBAM_016070__ 798 AATCGGCCTGGCAGCGGGAGAACCGCCGACAACAAAAGGATATACACCTT 847
BSNT_02647___ 848 CAGTGTTCGCTATTTTACCTCGTTTACTAGAACGAACAGGTGCAAACGAG 897
|.||||||||||||||.||.|||||.||.|||.||||.||.||.||.||.
RBAM_016070__ 848 CTGTGTTCGCTATTTTGCCCCGTTTGCTGGAAAGAACGGGCGCGAATGAA 897
BSNT_02647___ 898 CATGGAACCATTACGGCATTTTATACAGTGTTGGTAGACGGGGATGACAT 947
||.|||||.||.||.||.||||||||.||..|.||.|||||.||||||||
RBAM_016070__ 898 CAAGGAACGATAACCGCTTTTTATACGGTTCTCGTTGACGGAGATGACAT 947
BSNT_02647___ 948 GAATGAGCCGATTGCCGATACTGTACGCGGAATTTTAGACGGACATATTG 997
|||.||.||||||||||||||.||.||||||||.||||||||.|||||.|
RBAM_016070__ 948 GAACGAACCGATTGCCGATACGGTGCGCGGAATATTAGACGGGCATATCG 997
BSNT_02647___ 998 TGTTGGACAGGGCGCTTGCCAATAAAGGCCAGTTTCCTGCAGTTAACGTA 1047
|..|.||..|||||||||||||.|||||.|||||.||.||.||.|||.|.
RBAM_016070__ 998 TTCTCGATCGGGCGCTTGCCAACAAAGGGCAGTTCCCGGCCGTGAACATC 1047
BSNT_02647___ 1048 CTAAAAAGCATCAGCAGGGTGATGTCAAACATTTCA-ACAAAACAGCATC 1096
||.|||||||||||||||||.|||||.||.|||||| |||.|.| ||||.
RBAM_016070__ 1048 CTGAAAAGCATCAGCAGGGTCATGTCTAATATTTCAGACACATC-GCATA 1096
BSNT_02647___ 1097 TGGATGCGGCAAATAAATTCCGTGAACTTTTATCGACATATCAAAATTCG 1146
|.||.|||||.||.||||||||.||.|||.|.||.||.||||||||.||.
RBAM_016070__ 1097 TAGAGGCGGCCAACAAATTCCGCGATCTTCTGTCAACTTATCAAAACTCT 1146
BSNT_02647___ 1147 GAAGATCTCATTAATATCGGAGCTTACAAAAGAGGATCATCCAGAGAAAT 1196
|||||||||||||||||||||||||||||||||||.|||||.||||||||
RBAM_016070__ 1147 GAAGATCTCATTAATATCGGAGCTTACAAAAGAGGGTCATCAAGAGAAAT 1196
BSNT_02647___ 1197 TGATGAAGCGATACAATTTTATCCGCAGCTTATTCAATTTTTAAAGCAGG 1246
||||||||||||.||.|||||||||||||||||||||||||||||.||.|
RBAM_016070__ 1197 TGATGAAGCGATTCAGTTTTATCCGCAGCTTATTCAATTTTTAAAACAAG 1246
BSNT_02647___ 1247 GAACAGACGAACCGGCTTTATTGGAAGAAAGCATTGCTGTATTAACTAGT 1296
||||.||.|||||.|||..|||||||||.||||||||.|.|||.||.|||
RBAM_016070__ 1247 GAACGGAAGAACCTGCTCAATTGGAAGACAGCATTGCGGCATTGACGAGT 1296
BSNT_02647___ 1297 TTGACAGGAAATGAGGAATAA 1317
.||||||||||.|||||||||
RBAM_016070__ 1297 CTGACAGGAAAAGAGGAATAA 1317
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