Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02640 and RBAM_016010
See
Amino acid alignment /
Visit
BSNT_02640 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:31
# Commandline: needle
# -asequence dna-align/BSNT_02640___flgB.1.9828.seq
# -bsequence dna-align/RBAM_016010___flgB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02640___flgB-RBAM_016010___flgB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02640___flgB-RBAM_016010___flgB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02640___flgB
# 2: RBAM_016010___flgB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity: 330/396 (83.3%)
# Similarity: 330/396 (83.3%)
# Gaps: 12/396 ( 3.0%)
# Score: 1399.5
#
#
#=======================================
BSNT_02640___ 1 TTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGAGTAG 50
|||..|||||||||||||||.||||||||||||||.|||||||||.|.||
RBAM_016010__ 1 TTGGACTTATTTTCTGGAACTATACAAAATCTTGAGAATGCCTTGGGGAG 50
BSNT_02640___ 51 AGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATA 100
||||||.|||||||||||||||.||||||||||.||||||||||||||||
RBAM_016010__ 51 AGCGGACATTAAGCAAAAAGTCTTAACTAATAACATCGCCAATATAGATA 100
BSNT_02640___ 101 CACCGAACTATAAGGCAAAAAAAGTCTCTTTCCAAAATTTATTAGATCAA 150
|||||||||||||||||||||||||||||||||.||||||.||||||||.
RBAM_016010__ 101 CACCGAACTATAAGGCAAAAAAAGTCTCTTTCCGAAATTTGTTAGATCAG 150
BSNT_02640___ 151 GAATCTTCGCGTCTTGAAGCGATAAAAACAGACTATCGTCATGTTGATTT 200
|||.|.||...||||||.|||.|||||||.||||||||.||.|||||.||
RBAM_016010__ 151 GAAACATCCAATCTTGAGGCGGTAAAAACCGACTATCGGCACGTTGACTT 200
BSNT_02640___ 201 TTCTGATGCTGATTC----GA--ATTATTCAATTGTTGCGAGCGGAGATA 244
|.|.|.||| || |||||||.||.||..|.|||.|.||||
RBAM_016010__ 201 ------TACGGGTTCAGGGGACGATTATTCTATCGTGTCCAGCAGTGATA 244
BSNT_02640___ 245 CATCGTATCAGCAAAACGGAAACAATGTTGATGTTGACAAAGAGATGACA 294
|||||||.||||||||||||||||||||.|||.|.||||||||.||||||
RBAM_016010__ 245 CATCGTACCAGCAAAACGGAAACAATGTCGATATCGACAAAGAAATGACA 294
BSNT_02640___ 295 GAATTGGCGCAAAATCAAATCAACTATCAAGCTTTGGTTGAAAGAATGAA 344
||.||.||..||||.|||||.||.|||||.|||||||||||||||||||.
RBAM_016010__ 295 GATTTAGCCGAAAACCAAATTAATTATCAGGCTTTGGTTGAAAGAATGAG 344
BSNT_02640___ 345 CGGTAAATTTAATTCGCTGAAGACCGTATTAACAGGAGGAAAATGA 390
|||.|||||.|||||.|||||.|||||.||.|||||||||||||.|
RBAM_016010__ 345 CGGCAAATTCAATTCTCTGAAAACCGTCTTGACAGGAGGAAAATAA 390
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.