Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02635 and RBAM_015980

See Amino acid alignment / Visit BSNT_02635 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:31
# Commandline: needle
#    -asequence dna-align/BSNT_02635___clpQ.1.9828.seq
#    -bsequence dna-align/RBAM_015980___clpQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02635___clpQ-RBAM_015980___clpQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02635___clpQ-RBAM_015980___clpQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02635___clpQ
# 2: RBAM_015980___clpQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 547
# Identity:     455/547 (83.2%)
# Similarity:   455/547 (83.2%)
# Gaps:           2/547 ( 0.4%)
# Score: 1895.0
# 
#
#=======================================

BSNT_02635___      1 ATGTCATCTTTTCATGCGACCACAATATTTGCCGTACAGCATAAAGGACG     50
                     ||||||||||||||||||||.||.||.||||||||.||||||||.||...
RBAM_015980__      1 ATGTCATCTTTTCATGCGACAACGATTTTTGCCGTCCAGCATAACGGGAA     50

BSNT_02635___     51 AAGCGCTATGTCCGGAGACGGCCAAGTAACATTTGGTCAGGCTGTTGTCA    100
                     ||||||||||||.|||||||||||.||.|||||.|||||||||||.||||
RBAM_015980__     51 AAGCGCTATGTCAGGAGACGGCCAGGTCACATTCGGTCAGGCTGTAGTCA    100

BSNT_02635___    101 TGAAACACACGGCACGGAAAGTGAGAAAACTGTTTAACGGCAAAGTTCTT    150
                     |||||||.||.||..|.||.||||||||.|||||||||||.||.|||||.
RBAM_015980__    101 TGAAACATACCGCGAGAAAGGTGAGAAAGCTGTTTAACGGAAAGGTTCTG    150

BSNT_02635___    151 GCTGGCTTTGCGGGATCTGTTGCAGACGCTTTCACTTTATTCGAAAAGTT    200
                     ||.||.|||||||||||||||||||||||||||||..|.||.||||.|||
RBAM_015980__    151 GCCGGATTTGCGGGATCTGTTGCAGACGCTTTCACACTTTTTGAAATGTT    200

BSNT_02635___    201 TGAAGCTAAGCTTGAAGAATATAACGGCAACTTAAAACGGGCGGCTGTTG    250
                     |||.||.||||||||||||||.||||||||.||||||||.|||.|.||||
RBAM_015980__    201 TGAGGCGAAGCTTGAAGAATACAACGGCAATTTAAAACGTGCGTCGGTTG    250

BSNT_02635___    251 AGCTTGCGAAGGAATGGCGCAGTGATAAAGTGCTAAGAAAGCTCGAAGCC    300
                     ||||||||||.|||||||||||.|||||||||||..|.|||||.||||||
RBAM_015980__    251 AGCTTGCGAAAGAATGGCGCAGCGATAAAGTGCTGCGCAAGCTGGAAGCC    300

BSNT_02635___    301 ATGCTGATTGTTATGAATCAGGATACTTTGCTTCTCGTATCGGGAACAGG    350
                     |||||||||||.|||||.||||||||.|||||||||||||||||||||||
RBAM_015980__    301 ATGCTGATTGTCATGAACCAGGATACCTTGCTTCTCGTATCGGGAACAGG    350

BSNT_02635___    351 CGAGGTGATCGAACCAGATGACGGCATTCTCGCGATTGGATCAGGAGGCA    400
                     .||.|||||.||.||.||||||||||||.|.||.||.||.||.||.||.|
RBAM_015980__    351 TGAAGTGATTGAGCCGGATGACGGCATTTTGGCAATCGGCTCCGGCGGAA    400

BSNT_02635___    401 ATTACGCTTTGGCAGCGGGAAGAGCACTGAAAAAGCATGCCGGTGA-AAG    449
                     |.|||||..||.||||.||||||||.|||||||...|||||||.|| ||.
RBAM_015980__    401 ACTACGCCCTGTCAGCAGGAAGAGCGCTGAAAACCTATGCCGGAGAGAAT    450

BSNT_02635___    450 CATGTCTGCAAGTGAGATTGCCAGAGCCGCGTTAGAAACAGCAGGCGAAA    499
                     | ||||.||.|..||.|||||.|.||||||.||..|||..||.|||||.|
RBAM_015980__    451 C-TGTCCGCCAAAGATATTGCAAAAGCCGCTTTGAAAATCGCGGGCGAGA    499

BSNT_02635___    500 TTTGTGTTTACACGAACGATCAAATCATACTGGAAGAGCTTGAATAG    546
                     |||||||.|||||.||||||||.|||||..|||||||.|||||||||
RBAM_015980__    500 TTTGTGTGTACACAAACGATCAGATCATTTTGGAAGAACTTGAATAG    546


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