Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02634 and RBAM_015970
See
Amino acid alignment /
Visit
BSNT_02634 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:31
# Commandline: needle
# -asequence dna-align/BSNT_02634___xerC.1.9828.seq
# -bsequence dna-align/RBAM_015970___xerC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02634___xerC-RBAM_015970___xerC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02634___xerC-RBAM_015970___xerC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02634___xerC
# 2: RBAM_015970___xerC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 920
# Identity: 751/920 (81.6%)
# Similarity: 751/920 (81.6%)
# Gaps: 7/920 ( 0.8%)
# Score: 3075.0
#
#
#=======================================
BSNT_02634___ 1 ATG---GAGAATGTTAAGAATTTCGTAAAGTTATTCGTTGAATATTTACA 47
||| |||||||||||...|||..|||||||||||||||||||||||||
RBAM_015970__ 1 ATGACTGAGAATGTTAACTTTTTTTTAAAGTTATTCGTTGAATATTTACA 50
BSNT_02634___ 48 AATTGAAAAAAATAATTCACAATATACTATTGTGAATTATGTGGATTCAA 97
|||||||||||||.||||||||||||||||||||||||||||..||||.|
RBAM_015970__ 51 AATTGAAAAAAATTATTCACAATATACTATTGTGAATTATGTTAATTCGA 100
BSNT_02634___ 98 TTGAAGAATTCGAGACTTTCCTGCGCGTTCAAGGTATAAATGGATTTGAA 147
||||||||||.|.||..||.||||..|.||||..||||||||||.|..||
RBAM_015970__ 101 TTGAAGAATTTGGGATGTTTCTGCATGCTCAAAATATAAATGGAATGAAA 150
BSNT_02634___ 148 GAAGCTGCATATCAAGATACTAGGATTTTTTTGACAGAAGCCTATGAAAA 197
||||||||||||||.|||...||.||.|||||||||||.||.||||||||
RBAM_015970__ 151 GAAGCTGCATATCATGATGTGAGAATATTTTTGACAGAGGCTTATGAAAA 200
BSNT_02634___ 198 AGGTTTATCGAGAAGAACAATAAGCAAAAAGATATCTGCATTAAGAAGCT 247
|||..|.||.||||.||||||.|||||.||.||.||.||.||.|||||||
RBAM_015970__ 201 AGGCCTGTCAAGAAAAACAATCAGCAAGAAAATTTCAGCTTTGAGAAGCT 250
BSNT_02634___ 248 TTTATAAGTTTCTGATGCGGGAAAAGCTTATTGAAGAAAATCCGTTTCAG 297
|.|||||.|||.|.|||.|||||||||||.|||||||.||||||||||||
RBAM_015970__ 251 TCTATAAATTTTTAATGAGGGAAAAGCTTGTTGAAGAGAATCCGTTTCAG 300
BSNT_02634___ 298 CTTGTTCATCTGCCAAAACAGGAGAAACGGATACCGAAGTTTCTATATCA 347
||||||||||||||.|||||.|||||||||||.|||||||||||.|||.|
RBAM_015970__ 301 CTTGTTCATCTGCCGAAACAAGAGAAACGGATTCCGAAGTTTCTTTATGA 350
BSNT_02634___ 348 AAAAGAGCTTGAGGAGCTGTTTGAAGTTTCAGATATAAGCCAGCCGGCCG 397
||||||.||||||||.||.||.|..||||||||.|.|||.||||||.|.|
RBAM_015970__ 351 AAAAGAACTTGAGGAACTATTCGCTGTTTCAGACAGAAGTCAGCCGTCAG 400
BSNT_02634___ 398 GAATGAGGGATCAAGCGCTGTTAGAGCTGCTCTATGCCACCGGAATGAGG 447
|.|||.|.|||||.||.|||.|.|||||.||.|||||.||||||||||||
RBAM_015970__ 401 GGATGCGCGATCAGGCCCTGCTTGAGCTTCTTTATGCGACCGGAATGAGG 450
BSNT_02634___ 448 GTCAGTGAATGCTGTTCCATAACTATTAACGACGTTGATTTATTTATGGA 497
||||||||.||||||.|..|.|||.|...|||..||||..|.||.|||||
RBAM_015970__ 451 GTCAGTGAGTGCTGTACGCTCACTGTCGGCGATCTTGACCTGTTCATGGA 500
BSNT_02634___ 498 CACTGTGCTTGTTCACGGTAAAGGCAAGAAGCAGCGCTATATCCCCTTTG 547
.||.|||||.||||||||.||||||||||||||||||||||||||.||.|
RBAM_015970__ 501 TACGGTGCTCGTTCACGGGAAAGGCAAGAAGCAGCGCTATATCCCGTTCG 550
BSNT_02634___ 548 GGTCTTATGCCCGCGAAGCGTTGAAGGTATACATGAATAGCGGAAGACAG 597
|.||.||||||||.||.|||.||.||.|.||.||.||.||||||||.|||
RBAM_015970__ 551 GCTCATATGCCCGTGATGCGCTGGAGCTGTATATCAACAGCGGAAGGCAG 600
BSNT_02634___ 598 TGCTTGCTGATG--AAGGCAAAAGAACCTCATGATCTATTATTCGTAAAT 645
|||.|||| || ||.|||||.||.|||||||||.|..|.||.||.|||
RBAM_015970__ 601 TGCCTGCT--TGAAAAAGCAAAGGAGCCTCATGATGTGCTGTTTGTCAAT 648
BSNT_02634___ 646 CAAAGAGGCGGACCGCTTACAGCCCGTGGCATCAGACATATTTTAAGCGG 695
|||||||||||.|||||.||.|||.|.||.|||.|..|||||||||||||
RBAM_015970__ 649 CAAAGAGGCGGCCCGCTGACCGCCAGAGGAATCCGGTATATTTTAAGCGG 698
BSNT_02634___ 696 GCTTGTTCAAAAAGCGTCAAGCACTTTACATATCCATCCGCATATGCTTC 745
||||||..|||||||.||..|||||||||||||.||.|||||||||||||
RBAM_015970__ 699 GCTTGTAAAAAAAGCATCCGGCACTTTACATATACACCCGCATATGCTTC 748
BSNT_02634___ 746 GACATACGTTCGCCACGCATCTGTTAAATGAAGGAGCGGATTTGAGAAGC 795
|.||.|||||.||.||.||||||.|.||||||||.||.|||||.||||||
RBAM_015970__ 749 GGCACACGTTTGCGACTCATCTGCTGAATGAAGGGGCTGATTTAAGAAGC 798
BSNT_02634___ 796 GTTCAAGAACTGCTCGGGCATTCCAATCTGTCTTCTACACAGATATACAC 845
||.||.||.||..|.||.||||||||||||||||||||.|||||||||||
RBAM_015970__ 799 GTCCAGGAGCTTTTGGGCCATTCCAATCTGTCTTCTACGCAGATATACAC 848
BSNT_02634___ 846 GCACGTTTCGAAGGAAATGTTGAGAAACACATATATGTCTCACCATCCAA 895
.||.||.||||||||||||.|||||||||||||||||||.|||||.||.|
RBAM_015970__ 849 ACATGTATCGAAGGAAATGCTGAGAAACACATATATGTCCCACCACCCGA 898
BSNT_02634___ 896 GAGCATTTAAGAAAAATTAA 915
||||.|||||..||||||||
RBAM_015970__ 899 GAGCTTTTAAAGAAAATTAA 918
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.